Scophthalmus maximus (turbot): 118291629
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Entry
118291629 CDS
T09850
Name
(RefSeq) tenascin isoform X2
KO
K06252
tenascin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118291629
04518 Integrin signaling
118291629
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118291629
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118291629
Glycosaminoglycan binding proteins [BR:
smau00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118291629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_TEN
EGF_Teneurin
EGF_Tenascin
EGF_2
Fn3_Dep-1_3rd
FN3_Tor_3rd
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
DUF7949
EGF
EGF_PEAR1L
hEGF
MOV-10_Ig-like
Motif
Other DBs
NCBI-GeneID:
118291629
NCBI-ProteinID:
XP_035475841
LinkDB
All DBs
Position
22:complement(14863717..14885137)
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AA seq
2160 aa
AA seq
DB search
MPPSVPSSLLLLVLVLLQASSASQELQVRGHRSPREARPDSIKVVISEACVTQGDSSDVS
QAGREFDLAPGSPLVLTHKIKLVPSGLGSGAGSCGCEPDLAALRERLERLEREVSTLREE
CGGADGGCCTSKESKGAGCTIKPQKDECPNECSDQGRCVDAKCVCFPGFSGPDCSDSNCP
GNCHDSGRCVNGQCLCDPGLTGPDCSERTCPDTCSERGRCVDGQCVCDGGFTGPDCSELA
CPGNCNSRGRCVSGQCVCSDGFSGADCSEKTCPDNCNGRGKCVNGLCVCDSGFAGDDCSE
NSCPGNCNSRGRCVDGQCVCTDGFTGVDCTEKACPSNCSDRGRCVNGKCVCGVGFAGPDC
SAKGCPKNCSNRGRCVKGRCVCRREFKGQDCSLCADNMTGPNCDTIMSAVSQLTTRDVTG
SSVTLLWTPPPVQYDAYHLTFTSQKDGEQPVTVQVEGSLRSFTQTGLASAQLYGVTVVGE
IGGRRGAESHAQFMTLVSGPTNLHVVKTTSTSAVVQWEKPQGEIDRYRLTVTPSDGAGRS
QEITVPADRDSAHVGQLEAGRLYDVVLVAERGASRSEPATTQAVPGESLPMVTTAVLTRQ
VTLAPGQEVGDLDRGFDPSPEVQVSDQQGGRGDGREADSVRVGGIDGPDKHSSSSVPARS
KPLVSRTLALNGTRPNNAERLTLSRKPNVPGPFRFNASRVVPGGRKTGTGPLKKPLMGRK
QNAPIVPKKPKPGAPKKGNRTIDLTVKVPNTEASIAERRDDKSPPALTSGTDSETHRQKS
SEEPKRQPDVRVAGQGNDTAPVSSEPTGTVQRPEKKCLNKLKVTHSRLPHKDRGGGCEGE
GTDRSPPDLNPSSAETELDYSPDPLHKLLTETFDSLNITTFSVHLSKPSNLSVDANAVRK
QILRGLKPLTSFSSSSSSSSSTSRSSHPTASSSSSSSVSSLLTSASAPQVSSSSTAAKSS
SSLLTFLLSSSPPSLTHSSSPPSLTHSSSSLSLTPSSSSPLSSSLNKSDSFGSDELDVDK
SKNAADTASPEETTQSPSGKFGIRVFHHTHPKRGFIRRPRPNLGLFQNKTRLNLRGPQRS
PSHLNIIPTKETETRHSSPDESPPSSDLEEVKINTPVRDASRDEDGAAKPASSGQDQKPM
QTERGRTPVRHPPPKGGYVRRPFPNMGFLQNKTPPNSRLLTRPARPLNPDIETQKEQISQ
TESPATPSPLVSKESYPAEGREPKGDRAGMRISTIRMSNGLNQTLREPFSHRPMPRVPYY
HRPQVYGGPLQNKTRPNLRPPQYPRRGLIRKPFPIRKLNGDTVGSQTSQREIKGTPDTPQ
SQSGVEDVPRPTRGIGAQIRQEGELETAEVIPSAQMEGHGTAVTPQINKLEMEENAPVQT
TKSGEEETITPVSNNDFDIHRQRVDAPKNPAPAVRGRPNTQQTSFDSRASRPATIPKRQP
PSRNITGQHGTQMGHFSGGSQRGEDPKTNHTVKPFFDSKTGQTRGAASKPLMGSDVSSSG
VTREQLDYVGVTNRTSDGFTLIWDSPEGKYKNFVVTRKQVGKDARPKQQENPKNQERRRD
DSEREDGHEEQDGKHRPTEEPESEAGSTESVVTHIPMKHSSTTVKPSTGGVKTFKEVLPG
SARSLHFEDLPPRTEYTVTLLGKGPGLLSRLHKLVISTGPEPPTDIVFSEVTENSLTVSW
TKPKSPVSGFKVTYTHSEDGTGLTSDLVRAGEPVSVSLDSEDSSLGLSQLAPGSTYEVSI
LSILGLDESDPVDDVVRTLPDPPTHLRAVNVTDTKALLLWRPALAAIDKYALVYSSGPGS
ELRITVSGNAAEQQLSDLEGSTTYTVTITSQQGGDESSPASTSFTTASGSESDEPRDLRA
DHVTPRTALLSWKPPAQPAGSYRLTYQTEGHEMKELTVDSSETQFNLTRLQPGATYTVQL
QAEAGGRYTSTASTEFTTGTLRFPFPTDCSQELLNGIRTSGQVEIFPQGKQATPTAVYCD
METDGGGWTVFQRRRDGSVDFYRGWAEYARGFGDLSGEFWLGLESLHNLTSMTRMSLRVD
LRDGDDSAFAKYSTFEVARRNYKLSVGGYSGTAGDSLSYHNNRVFSTKDRDPAPFITRCA
MSYRGGWWYKNCHQANLNGLYGIDVKHQGLIWTSWKGKDVSVAFTEMKMRPASFSPPARG
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atgcctccctccgtcccctcctccctccttctcctcgtcctcgtcctcctccaggcctca
tcggcctcccaggagctccaggtcagaggtcacaggtcaccgagggaagccaggccggac
tccatcaaggtggtgatctccgaggcctgcgtcactcagggggattcgtctgacgtcagt
caggcaggcagagagttcgacctggcccctggttctcctctggtcctgacccataagatc
aaactggttccgtcgggtctgggttcgggagccgggtcctgcggctgcgagccggacctc
gcggcgctgcgggagcgtctggagcgtctggagcgggaggtgtcgaccctccgagaggaa
tgtggaggagctgacggaggctgctgcacctccaaggagagcaaaggtgcaggttgcacc
atcaagccccagaaggacgaatgtcccaacgagtgcagtgaccagggtcgatgcgtggac
gccaagtgcgtctgtttcccggggttcagcggacccgactgcagcgactccaactgtccc
gggaactgccacgacagcgggaggtgtgtgaacggacagtgtctgtgcgaccctggactc
accgggccggactgctccgagaggacctgtcccgacacctgcagcgagcgtggccggtgt
gttgacggtcaatgtgtttgcgacggcggcttcaccggcccggactgctcagaactagcc
tgtcctgggaactgcaacagcagggggcgctgcgtcagcgggcagtgcgtttgcagcgat
ggattcagcggcgcagattgttctgagaagacttgtcctgataactgcaacggacgtgga
aagtgtgtgaacggtctatgtgtttgcgacagcggcttcgccggtgacgactgctctgaa
aactcctgtccaggaaactgcaacagcagggggcgctgcgttgacggtcagtgcgtttgc
accgatggattcaccggtgtggactgcaccgaaaaagcttgtcccagcaactgcagcgac
cgcgggaggtgtgtcaacgggaagtgtgtttgcggcgtcggattcgccggaccggactgc
tccgccaaaggttgtcccaagaactgcagcaacagggggcgctgcgtcaaggggaggtgc
gtctgtcggcgtgagttcaaggggcaggactgcagcctgtgtgcggacaacatgaccgga
cccaactgtgacacaatcatgtcggccgtttcccagctgacgactcgtgacgtcacaggc
tcgtccgtcacgctgctctggactccgcctcctgtccagtacgacgcctaccacctgacc
ttcaccagccagaaggacggggagcagccggtgacggtgcaggtggagggaagcctccgc
agcttcacgcagaccggactggcgtcggcgcagctctacggcgtcacggtggtcggagag
atcggcggcaggaggggagcagagagccacgcccagttcatgaccctcgtctcaggtccc
accaacctccacgtggtcaagacgacctccacgtcggcggtggtccagtgggagaagccg
cagggtgagatcgaccggtaccgtttgaccgtcacgcccagcgacggagcggggaggagc
caagaaatcaccgtgccggctgaccgagactccgcccacgtcgggcagctggaggcgggg
cgtttgtacgacgtcgtcctcgtggcggagaggggcgcgagtcggagcgagccggcgacc
acccaggccgttcccggggaatcattaccaatggttaccacggcagttttgaccaggcag
gtcacgctcgcacctggacaagaagttggtgacttggaccgaggattcgacccgtcgcct
gaggtgcaagtctcagaccaacagggggggaggggggatggaagagaggccgactctgtg
agagttggaggtatcgatggaccggacaaacactcctcatcctctgtgcctgcaagaagt
aaacctctggttagcaggaccctggcgttaaacggcaccaggcccaacaacgcagaaagg
ctcacattgtccaggaagccaaacgtcccaggaccgttccgattcaacgcatccagagtt
gtgcctggggggagaaaaactggcactggccccttgaaaaagcccttaatggggaggaaa
cagaacgccccgatagtgcccaaaaaacctaaaccaggtgcccccaaaaaaggaaacagg
acaatagatttgactgtgaaagtacctaacactgaagcttcaatcgctgagaggagggac
gacaaaagtccgcctgctctaacgtctggaactgattcagaaacacacagacagaaaagc
tcggaggaaccaaaaaggcaaccagatgttagggtggcgggccaaggaaacgacactgct
ccagtgtcttcagagccaactgggactgtccaacgcccggagaagaaatgtctgaacaaa
ctcaaagtgactcacagcagattaccccataaggacagaggcggcggatgcgaaggggag
gggacagatcgatcccctcctgatctgaacccctcgtctgcagagacggaactcgactat
tcaccagatcctcttcacaaactcctgacggaaacttttgacagtttgaatatcacaaca
ttttctgttcacctgtccaaaccatcaaacctctctgttgatgcaaacgcagtgaggaag
cagatcttaagaggactgaagccgctgacatcattttcgtcatcctcttcatcatcctca
tcgacctcaagatcatcacatccaacagcctcatcatcatcatcatcatcagtttcatcc
ttattgacttcagcatcagctcctcaagtttcatcctcatcaacagcagcgaaatcatca
tcgtcactactaacatttttattatcgtcatcaccaccatcacttacacattcatcatca
ccaccatcacttacacattcatcatcatcactatcacttacaccttcatcatcatcacca
ttgtcttccagcttaaataaatctgattcatttggaagcgatgaactggatgttgataaa
agcaaaaacgcagctgacactgcatcaccagaagaaacaacgcaatcgccctcaggaaaa
tttggcatccgcgttttccaccacacgcatccaaaacgtggtttcatacgtcgtccacgg
ccaaacttaggtttgtttcagaacaagacccgtctaaatttgagaggtcctcaacgctcc
ccatctcatttaaacattatccctacaaaagagacagagaccagacattcatccccagat
gaatcaccgccttcatctgatttggaggaagttaagataaacacaccagtcagggatgcg
agtagagacgaggatggggcagctaagcctgcatcctctggacaagaccagaaaccgatg
cagacagaaagaggacgaactccagttcgccatcctcctccaaaaggtggatatgtgcgt
cgcccttttccaaacatgggatttcttcagaacaaaactcctcctaattcaaggctcttg
actcgccccgctcgacctttaaatcctgacatagaaacacagaaagagcagatatcccaa
actgaatcaccagccactccatctcctcttgtttccaaagaatcctatcccgctgaaggt
agagagccaaaaggagacagagctgggatgaggatctccacaataaggatgtccaatggt
ttgaatcagactctcagagagcctttctcccatcgcccaatgcccagagttccttattac
catcgcccccaggtgtatggtggacctctccaaaacaaaacacgtccaaacctgagacca
cctcaatatccacgtagaggtctcattcgcaaacctttcccaattagaaagctaaatgga
gacactgttggaagtcaaactagccaacgagaaatcaagggtacacctgacaccccgcaa
agccagtcaggagtggaggatgtccccaggcctacccgaggaatcggagcccaaataaga
caagagggagaactagaaactgcagaagtaattccaagtgcccagatggaaggacatgga
actgctgtcacaccacaaattaacaaattagaaatggaagaaaatgctccagtccaaacc
acaaaatctggggaagaagaaaccatcacccctgtttctaataatgactttgacattcac
agacagagagtcgatgctcctaaaaatcctgcccctgcggttcgcggtagaccaaatacc
caacaaacttcctttgattcaagagcctcaagaccagccacaattccaaaacgacaacca
ccctcaagaaatataacaggacaacatggcacccagatgggacacttcagcggtgggagc
caaaggggagaggatccaaaaacaaatcatactgtaaaaccgttttttgacagtaaaact
ggacaaacgagaggtgctgcttccaaacctttgatgggatcagatgtttcttcatccgga
gtcacaagagaacagctggactacgttggagtgacgaaccggacctcggatggttttacg
ctcatatgggactcgccggaaggaaagtacaaaaactttgttgttactaggaaacaagtt
ggaaaggatgcgagaccaaagcaacaagaaaacccgaaaaaccaagaaagacgccgggac
gactctgagagagaggatggacatgaagagcaggatgggaagcatcgaccaactgaggaa
cctgaatcggaagccgggagcactgaaagtgtggttacacatattccgatgaagcacagc
agcacaacagtgaaaccgtcaacaggaggcgttaaaaccttcaaagaagttcttcctggt
tcagctcgctccctccactttgaggatctgcctcctcggaccgagtacaccgtgaccttg
cttggaaaaggtcctggcctcctgtcgagactccacaagcttgtcatcagtacaggcccc
gagcctccgaccgacatcgtcttcagcgaagtgacggaaaactccctgacggtgtcctgg
accaaacccaagagtcccgtcagtggtttcaaagtcacctacacccacagcgaggacgga
accggactgacgtctgatctcgtccgtgcaggggagccggtgtccgtgtccctggactcg
gaggactcctccctcggcctatcgcagctcgctcccggttccacctacgaggtcagcatc
ctctccatcctcggactggacgagagcgatcccgtcgacgacgtcgtcaggacactgccc
gacccgccgacacacctccgggccgtgaacgtcacggacaccaaggccttgttgttgtgg
cggccggcgttggccgccatcgataagtacgccctcgtctacagctctggtcccggttca
gagttgagaatcaccgtgtctggaaacgcagccgagcagcagctgagcgatctggaagga
tccacaacctacaccgtcaccatcaccagccagcagggcggcgacgagagctcaccggcc
tccaccagcttcaccaccgccagtggctctgagagcgacgagccgcgagacctccgggcc
gaccacgtgacccctcgcaccgccctgttgtcatggaaaccacccgcgcagcccgccggg
agctacaggctgacgtatcagacggaaggtcacgaaatgaaggagctgacggtggattcg
tcagagacccagttcaacctgaccagacttcagcccggggccacgtacacggtgcagctg
caggcggaggccgggggacgatacacctccaccgcttccacagagttcaccaccggcacc
ctgaggttccccttccccaccgactgctctcaggagctgctgaacggcatcaggacgtcc
ggccaggtggagatcttccctcaggggaaacaggcgacgccgacggcagtttactgcgac
atggagaccgacggcggcggctggacggtcttccagaggaggagggacggctcggtggac
ttctacagaggctgggcggagtacgccagaggattcggagatctgagcggggagttctgg
ctcggactcgagagtctccacaacctgacatcaatgaccaggatgagtctgcgcgtcgac
ctgcgagacggagacgactcggcgttcgccaaatactccacgttcgaagtggcccggagg
aactacaagctgagcgtgggcggatacagcggcacggcaggcgactccctcagctaccac
aacaaccgcgtcttctccaccaaagaccgcgacccggcgccgttcatcacccgctgcgcc
atgtcgtaccgcggaggctggtggtacaagaactgccaccaggccaacctcaacggtctg
tacggcatcgacgtcaagcaccagggtctgatctggacttcctggaaaggaaaagacgtc
tccgtcgcgttcactgagatgaagatgcgaccggcgtccttcagtcctccagccagaggg
tga
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