Scophthalmus maximus (turbot): 118291670
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Entry
118291670 CDS
T09850
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118291670 (vps52)
Membrane trafficking [BR:
smau04131
]
Protein recycling
Others
EARP complex
118291670 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
118291670 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF3440
MscS_porin
COG6_N
DUF1664
Motif
Other DBs
NCBI-GeneID:
118291670
NCBI-ProteinID:
XP_035475922
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All DBs
Position
22:complement(14923321..14933679)
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AA seq
742 aa
AA seq
DB search
MAAVTSSAASAAAGLQVNAAGSPTDVAMMYLQDETTDGDMGNLSLEELDLTTDEYILDEV
DIHIQANLEDDLVKEALKTGVDLRQYSKQVEAELQRIEQASIKDYIKESQNIALLHNQIT
ACDSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVV
PGAMISTILESPVTEQEFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKLKAVSK
IREFILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYY
SYFKSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAILSPA
ELEGPILVPHTAQRGDSRYPYEMLFRSQHYALLDNGCREFLFLSDFFMVAGNSALDLFNC
IMGKTLSMFLKSMSTYVSDCYDSIAVFLCIHIILRFRAVTAKRNVPALDKYWETVLELLW
PRFELILEMNIHSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTHTLLG
QLQVEVENFVLKMAAEFPSRRDQLIFLINNYDMLLGVLMERAADDSKEVEGFQQLLLART
QEFIEEILSSPFGGMVAFVKEAEVLIEKGQLDRLKNEEVQEAESESYLGLCLLSARITQL
VRGFSSTWKQSVESMSQDVMRSFTNFKNGTSIIQGALTQLIQYYHGFHKVLNQPTFRSLA
VRSELINLHHLMVEVKKHKPNF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgacttcatccgcagcttcagccgcagcgggtctgcaggtgaacgcagcc
gggagcccgacagacgtcgccatgatgtatctacaggacgagacgaccgacggcgacatg
gggaacctgagcctcgaagaactggatctcaccacggacgagtacatcctggacgaagtc
gacattcacatccaagccaatctggaggacgacctggtgaaggaggcgctgaagacgggc
gtcgacctgcggcagtattccaaacaggtggaggcggagcttcagcggatcgaacaggcg
tcgatcaaagactacatcaaggagagtcagaacatcgctctgctgcacaaccagatcact
gcctgcgactccatcctggagcggatggagggaatgctgagcggcttccagagtgacctg
tcgtccatcagcagcgaaatccagacgctgcagcagcagtcggtcagcatgaacgtgcgt
ctgaagaaccgtcaggccgtacgcagccacctcagccagctggtggacgagctggtggtg
cccggtgccatgatctccaccatcctggagagtccggtgacagagcaggagttcctggag
cagcttcacgagctcaacaacaagatcaacttcgccaaagagctgagcttcagagagaca
ctggcctgctccgacatccaggacatcgtggaccgcctcaagctcaaggcagtgtcgaag
atcagagagttcatccttcagaagatctactccttcaggaagcccatgaccaactaccag
atcccacagaacacgctgctgaagtacagattcttctaccagttcctcctggccaacgag
aggacggttgccaaggagatccgagacgagtacgtggacacgatgagcaaaatctactac
agttacttcaagtcgtacagcggccgtctgctcaaagtccagtacgaggaggtggccgac
aaggacgacctgatgggggtcgaggacacggcaaagaaaggtttcttctccaaaccgtcg
ctgaagagccggaacacgatcttcactctgggccagaggggggcgatactgagccccgca
gagctggaggggcccatcctggtcccacacacggctcagaggggggacagtcggtatccg
tacgagatgctgttccgcagtcagcactacgcgctgctggacaacggctgcagagagttc
ctcttcctgtccgacttcttcatggtggcggggaactcggccctcgaccttttcaactgc
atcatgggaaaaaccctcagcatgttcctgaagagcatgtccacgtatgtgtccgactgc
tacgacagcattgccgtcttcctgtgcatccacatcatcctcaggttcagggccgtcacc
gccaagaggaacgtccccgccctcgacaagtactgggagacggtgctggagctgctgtgg
ccgaggttcgagctgattctggagatgaacatccacagcatcagaaacaccgacccccag
aaactgggagtcctggacactagaccacactacatcacccgtcgttacgcagagttctcg
tcggccatcgtcagcatcaatcagacgtttcccaacgagaggactcacactctgctggga
cagctgcaggtggaggtggagaactttgtgctgaagatggcggcggagtttccctccaga
agagaccaactcatcttcctcatcaacaactacgacatgctgctcggtgtcctcatggag
agggcggcagacgacagcaaggaggtggaaggtttccagcagctgcttctggccaggacg
caggaattcatcgaggagattctgtcctcacccttcggagggatggtcgcctttgtgaag
gaggccgaggtgctgatagagaaagggcaactggaccgactgaagaatgaagaagtgcag
gaggcggagtcagagtcttacctgggtctctgtctcctctcagcccggatcactcagctt
gttcgcgggttttccagcacgtggaaacagtcggtggagtcgatgagtcaggacgtcatg
aggtcgttcaccaacttcaaaaacggaaccagcatcatacagggcgctctgacccagctg
atccagtactaccacggcttccacaaggttctgaaccagcccaccttccgcagcctggcg
gtccggtcggagctcatcaacctgcaccacctcatggtcgaggtcaagaagcacaaacca
aacttctga
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