KEGG   Scophthalmus maximus (turbot): 118291762
Entry
118291762         CDS       T09850                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118291762
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smau03019]
    118291762
   03016 Transfer RNA biogenesis [BR:smau03016]
    118291762
   03012 Translation factors [BR:smau03012]
    118291762
   04131 Membrane trafficking [BR:smau04131]
    118291762
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smau04147]
    118291762
Messenger RNA biogenesis [BR:smau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     118291762
Transfer RNA biogenesis [BR:smau03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    118291762
Translation factors [BR:smau03012]
 Eukaryotic type
  Elongation factors
   118291762
Membrane trafficking [BR:smau04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    118291762
Exosome [BR:smau04147]
 Exosomal proteins
  Proteins found in most exosomes
   118291762
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 118291762
NCBI-ProteinID: XP_035476037
UniProt: A0A8D3CSP1
LinkDB
Position
22:12589218..12594707
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASEKMAWFKGWKIERKEGGATGTTLLEALDSIMAPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPPNLTTEVKSVEMHHESLP
EALPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPMAADNFSAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELVEKIDRRSGKKLEDNPKALKSGDAAIIKMMPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVDKKLPSGGKVTKSAQKAEKKK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccaccaccaccggccacctgatctacaagtgcggcggcatcgacaagaggaccatcgag
aagttcgagaaggaagccgccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcacaattgacatcgctctgtggaagttt
gagaccgccaagtactacgtgaccatcatcgatgcccccggacacagggacttcatcaag
aacatgatcactggtacctctcaggccgactgcgccgttctgatcgtcgctgccggtgtt
ggtgagttcgaggcaggtatttccaagaacggccagacccgcgagcacgccctgctggcc
ttcaccctcggcgtgaagcagctcatcgtcggcgtcaacaagatggactccaccgagccc
ccgtacagccagaagcgtttcgaggagatcaccaaggaagtgagcgcctacatcaagaag
atcggctacaaccccgccaccgtcgccttcgtccccatctctgggtggcacggagacaac
atgctggaggccagtgaaaagatggcctggttcaagggttggaagattgagcgcaaagag
ggcggtgccactggcaccaccctgctggaggcgctggactccatcatggcccccagccgc
cccactgacaagcccctgcgtctgcccctgcaggacgtctacaagattggtggtattgga
actgtccccgtcggccgcgttgagaccggtatcctgaagcctggcatggtcgtcaccttc
gctccccccaacctgaccaccgaggtgaagtctgtggagatgcaccacgagtccctgccc
gaggctctccccggcgacaacgtcggcttcaacatcaagaacgtgtccgtcaaggagatc
cgccgcgggaatgtggccggcgacagcaagaacgacccgcccatggcggccgacaacttc
tctgctcaggtcatcatcctcaaccaccccgggcagatctcacagggctacgcccccgtg
ctcgactgccacaccgctcacatcgcctgcaagttcagcgagctcgtggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaggccctcaagtctggagacgccgcc
atcatcaagatgatgcctggaaagcccatgtgtgtcgagagcttctcacagtatccccca
ctgggtcgcttcgctgtgcgcgacatgaggcagaccgtggccgtcggtgtcatcaagtcc
gtggataagaagctcccctccggtggcaaggtcaccaagtcggcacagaaggccgagaag
aagaaatga

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