Scophthalmus maximus (turbot): 118291893
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Entry
118291893 CDS
T09850
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118291893 (smarcc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118291893 (smarcc1b)
03036 Chromosome and associated proteins [BR:
smau03036
]
118291893 (smarcc1b)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118291893 (smarcc1b)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118291893 (smarcc1b)
PBAF complex
118291893 (smarcc1b)
GBAF(ncBAF) complex
118291893 (smarcc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
SpeFL
Motif
Other DBs
NCBI-GeneID:
118291893
NCBI-ProteinID:
XP_035476284
UniProt:
A0A8D3AIY8
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All DBs
Position
22:4824460..4832065
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AA seq
949 aa
AA seq
DB search
MATMSGGTNAGLRGTSQTSSGTTAHRKKDSSPSARFWESPDTLAQLEVVRQWTGKHYKKF
VLVDAPSCQALAAVTLQLLQFQEDAFGRQASSPALTKLPAHCFLDLRPGGGLCHILGTAY
KFKAEQGWRRFDLQNPSRTERNVEMFTAIKGALIQNNCMSLPVVYLDPTLDQELTSRLTN
VITKRQGALTEDRTLASHHIYALPASTEEDEWMRPVMRKDKHVLVHWGMHPDSYDSWLPS
SDVEGEVEEPPHPERPWRVSAGWVLDTDVFNEWMNEEDYCVDERNVPIILRRRIHLQEDQ
DSKSTPSKKRRRSPSPPSSEGRKKGKKGRRRGQQEEELEEDLTKDMEDPTPVPNMEEVIL
PKNVNLKKDSENTPVKGGTMADLDEQEDDLREDEEGRGDMPRLSEGEDNITEQTHHIIIP
SYTSWFNYNRIHLIEKRALPEFFNGKNKSKSPEIFLAYRNFMIDTYRLNPQEYLSSTSCR
RNLTGDVCAVMRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQHK
PLQVTASQHMLYFPEKSREKPSDCQNFGLRNDIYTKKHPKTKGASAGREWTEQETLLLLE
ALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSEN
PVMSTVAFLASVVDPRVASSAAKAALEEFSSVQEDSADKVSEISNQPKKSESMDAEKMEA
NSTCHQVAGRTDGKVEPSGTKVEADGIKGENAENILAEEKDGRGDDDESVGRREGDGDEG
RRVMELDLVEASVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRH
FEELETIMDREKEALEQQRQQLLSERQTFHTEQLKQAEMKIRQQREQQGQPGYTTQHSGQ
SLPNRMMPSGGNTQPMAPRHPGAPNGMYPASQPDGITPAQPGPPASTHS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatgtccggaggaacgaacgccgggcttcgcgggacgagccagaccagctct
gggacgacggcgcatcggaaaaaagacagcagtccgtcggcccggttctgggagagtccg
gatactttagcccagctggaggtggtgcgacagtggaccgggaagcactacaaaaagttt
gtgctggtggacgctccatcatgccaggccctggccgcagtcactttacagctcctccag
ttccaggaggatgcctttggccgacaagcttccagtcctgctctcaccaagctgcccgca
cactgcttcctggacttgcgaccaggggggggactctgccacattcttggaactgcctac
aagttcaaggctgagcaaggctggcgaaggttcgacttgcagaatccatcgagaaccgag
aggaatgtggagatgtttactgcaattaaaggggcgctgatccagaacaactgtatgtca
ctgcctgtggtatatctggaccccacacttgatcaggagttgacaagcagattgaccaac
gtcatcaccaagcgccagggtgcactcactgaggaccgaacgctcgccagtcaccacatc
tacgccttacctgcttctacagaggaagatgaatggatgcgtcctgtcatgcgtaaagac
aagcatgtcttggtacattggggcatgcaccctgacagttatgacagctggctgccctca
agtgatgttgaaggagaggttgaagagccaccacacccagagagaccctggagggtcagt
gctggttgggttctggacacagatgttttcaatgagtggatgaatgaggaagactattgt
gtggatgagaggaacgtaccgataatccttcgccggcgtattcacctgcaagaagaccag
gactcgaagtctaccccatccaaaaagagaagacgatctccctcccctccctcctctgaa
ggcaggaagaaaggaaagaaggggagaaggcgaggtcaacaggaggaagagctagaagag
gacctgaccaaagacatggaggatcctacccctgttcctaacatggaggaggtcatacta
cccaagaatgtcaacctgaagaaagacagtgagaatactcctgtcaaaggaggcaccatg
gccgacctggatgaacaggaggatgatttaagggaggatgaagagggaagaggagatatg
ccacgattatcagagggagaggacaatatcacagaacaaacccatcacattataatacca
agctacacatcttggttcaactacaaccgcattcacctaatagagaaacgagcactgccg
gaattctttaatggaaagaacaagtcaaaatctccagaaattttcctggcgtaccgcaac
ttcatgattgacacataccggctcaacccccaggaatacctcagttcgacgtcctgcaga
cgcaacctcaccggagacgtctgtgccgtcatgagggttcatgcgtttttggagcagtgg
ggtttgattaactaccaagtggacgcagagagcagacccctccccatgggacccccaccc
acgcctcatttcaacgtactggctgacacaccgtctgggctggcccccctacaacacaaa
cccctgcaggtgacggcctcgcagcatatgttgtatttcccagaaaagagcagagagaag
ccttcagactgccagaactttggtctgcgaaacgacatctacaccaagaaacaccccaag
accaaaggagcgagtgcaggaagggaatggacagagcaagagacactcttgctgttagag
gccttagaggtttacagagacgactggaacaaagtatctgaacatgtgggatccagaaca
caggacgagtgtatcctccacttcctccgtctgccgatagaagacccttatctcgaagac
tcctcagcctctctgggtccactggcgtaccagcccgtgcctttcagccaatcggagaat
cccgttatgagcactgtggccttcctggcatccgtggtggacccgcgggtggcatcgtct
gcagctaaggccgcgctggaggagttttccagtgtgcaggaagactctgcggataaggtc
tctgaaatatccaaccagcccaaaaaatcagaatccatggatgcagaaaaaatggaggca
aactccacctgccatcaggtcgctggaaggacggatgggaaggtggaacccagtgggaca
aaagtggaggcagacggaatcaaaggggaaaatgcagaaaatatacttgcagaggagaaa
gatggaaggggagatgatgatgagagcgtagggcggcgagagggagacggggacgagggg
aggagagtaatggagctggatctggtggaggccagcgttgccacggcagcagcagctgca
ctggcctcagctgccacaaaggccaagcacttggcagcagtggaggagaggaagatcaag
tccctggtggcgctgctggtggagactcagatgaagaagcttgagatcaagctgagacac
tttgaggaactggagaccatcatggaccgcgagaaagaggctctggagcagcagaggcag
cagcttctctcagagagacagactttccacactgagcaactgaaacaggcagagatgaag
atccgccagcagagggagcagcaggggcagcccggatacacaactcagcattcaggccag
tccttgcccaaccggatgatgcctagtgggggcaatacccagccgatggccccccgacac
cccggagctcccaatggcatgtacccagcctcacagcctgatgggatcacaccagctcag
cccggtcctccagcgtccacacacagctga
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