Scophthalmus maximus (turbot): 118291896
Help
Entry
118291896 CDS
T09850
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smau00535
]
118291896
Proteoglycans [BR:
smau00535
]
Cell surface proteoglycans
Others
118291896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
Cadherin_C_2
PIRT
PRIMA1
Motif
Other DBs
NCBI-GeneID:
118291896
NCBI-ProteinID:
XP_035476289
LinkDB
All DBs
Position
22:4834279..4848428
Genome browser
AA seq
691 aa
AA seq
DB search
MLCGHSRLGAWQVLMAISLVITPLSAHGRHSLTRRHHHHNQSTVNKEALDTRMVLSDDSA
EREHLIGAGLGAKLPLGSTKHHHSRKHVHLDFIEEDPPVGEELTAGGGGPDQPGNPMSDD
VITVAFHSPAPDVVPSDAMDLTKVPKPQKQKGGDPTAWTLSDFYDLFPDDDLSALDTTPE
PEPTLSPPADMEDENPLLTVSPAVPDDVKPNVESRPSSPVAPMPGPDKDDGLGLGGAMGA
DGCRLGFVRSGPGVCVSQCDTEPNFCFNGGVCTVVAGMGAFCRCNVQDYIWNKGTRCDWA
VTEFQVMCVVVGVASFVFLLLFMIIVFFAKRLHRLKNENRRLRKRSKYRPQSSEPQTDGL
SVSTTADGSQPNVRKLCDTPPSAPQAHTHNLAYYDNIICQRPSTASYTWEYKPRNPYNHF
QDDPQKQDNAAKSPQAKEEGSMNILNSHSPKHENNRPASVAHDHGHTPNNTEEKNAEDGV
TIGLEVLLPKEAKLHAETSPPLQYDVFLYKVANGGDAASPGQAPPSHSANSYTTSLHIPK
SPKTPKKAKSPKVSKSSKSPKPTKEHPAIDREPLSGRHSSPGRNTSAVRHPSPICHSAPG
CYFSPTCHPSSHHSPAQCKCMPTSSSTPPQLRRPRGRSQAPDSERSGAGRECQSGHLRPS
PSSPHLTQPPPSPSSWVKYSPVSTRSLPPLS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgcgggcacagtcgtctgggggcctggcaggtgctaatggccatctcactggtc
atcacccccctgtctgctcacgggaggcattcattgaccaggcgccatcatcaccacaac
cagtcaacggtcaacaaggaggccttggacaccaggatggtgcttagtgacgactcagcg
gagagagaacacctgattggagcaggtcttggggccaaactcccactcggctccaccaaa
caccaccattctcgtaaacatgtccacctagacttcatagaggaggacccacccgtgggg
gaggagctcactgctggcgggggaggtccagaccagcccggaaacccaatgtccgacgat
gtcatcactgtggcgttccacagcccggctccggatgttgtgccctctgatgccatggat
ttgacaaaagtcccgaagccccagaagcagaaagggggagaccctaccgcgtggacactt
tcggacttctacgacctgttccctgacgacgacctctcggcgttggatacgaccccagaa
cctgagcccaccctttcacccccagccgacatggaggatgagaatccgctccttactgtt
tctcctgctgttcctgacgacgttaagccaaatgtggagagcaggccttcctcacctgtc
gctcccatgccagggcccgacaaggatgatgggttaggtcttggtggtgcaatgggggct
gacggctgcaggctgggctttgtacgttctggaccaggggtatgtgtgtctcagtgtgac
actgaacccaatttctgcttcaacggaggggtgtgcactgtggtggcaggaatgggagct
ttctgcaggtgtaatgtgcaggactacatctggaacaaaggcacacgctgtgattgggcg
gtcacagagttccaggtgatgtgcgtggtggtgggcgtggcctcctttgtgttcctcctc
ctcttcatgatcatcgtattctttgccaagaggctgcatcgcctcaagaacgagaacagg
cgccttcgcaaacgcagtaagtaccgcccgcagagcagcgagccacagacggacggcctc
tcggtttccacaacagccgacggctcacagccaaacgtaaggaaactgtgcgacacccct
ccgtccgctccccaagctcacactcacaacctggcgtactatgacaacattatctgtcag
aggccatcaacagccagctatacctgggaatataaacccagaaacccttataaccacttc
caggatgaccctcagaagcaggacaacgcggcaaagtccccgcaggccaaggaagagggg
tccatgaacatcctcaactctcattcccccaagcacgagaacaatcgcccagcctctgtc
gctcacgaccacggccacacccccaacaacacagaggaaaaaaacgccgaggatggagtc
actattggcctggaagtgctcctccccaaagaggccaagctccacgcagagaccagcccg
ccccttcagtatgacgtcttcctctacaaggttgccaacggcggagacgctgcctctccc
ggccaagcccctccctctcacagtgccaactcctacaccacctctctccacattccaaaa
tcgcccaaaacacccaagaaagccaagtcgcccaaggtgtccaagtcgtccaaatcaccc
aaacccaccaaggagcatccagccattgaccgcgagcccttgtctggaaggcactcctca
cctggccgtaacacctctgctgttcgccacccatcgcccatctgtcattctgcacctggg
tgctatttttcccccacctgccatccgtcctcccaccactctcccgcccagtgcaaatgc
atgcccacatcttcttccaccccgccgcagcttcgcaggccccgaggtcgatctcaggcc
cccgactcagagcgctcgggcgcggggagagagtgccagagtggacaccttcgtccatct
ccctcctcgcctcatctcacccagccacctccatcgccatcatcctgggtgaagtacagc
ccagtcagcacccgatctctgccgccactctcctga
DBGET
integrated database retrieval system
