Scophthalmus maximus (turbot): 118291958 Help Entry 118291958         CDS       T09850                                  Symbol col1a2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism smau  Scophthalmus maximus (turbot) Pathway smau04510   Focal adhesion smau04512   ECM-receptor interaction smau04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:smau00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118291958 (col1a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     118291958 (col1a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     118291958 (col1a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:smau00536]     118291958 (col1a2) Glycosaminoglycan binding proteins [BR:smau00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118291958 (col1a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  118291958 NCBI-ProteinID:  XP_035476418 LinkDB All DBs Position 22:complement(4194805..4213434) Genome browser AA seq 1352 aa AA seqDB search MLSFVDTRILLLLAVTSYLASCQYAGPRGDKGPRGDRGPKGPDGRDGKPGLPGPAGPPGP PGLGGNFAAQYDGSKAPDAGPGPMGIMGARGPPGPPGSPGPQGHTGHAGEPGEPGQTGPV GARGPPGPPGKSGEDGNNGRPGKPGDRGTPGPQGARGFPGTPGLPGMKGHRGYTGLDGRK GEPGAAGAKGEPGAHGASGSPGLAGSRGMNGERGRAGPAGPAGARGADGNVGPAGPAGPV GAAGPPGFPGGPGPKGEVGGAGSTGPAGPQGSRGEPGPNGAGGPVGPAGNPGANGLNGAK GAAGAAGVSGAPGFPGPRGGPGPQGPQGASGPRGLAGDPGTQGVKGDSGPKGEPGNSGPQ GAPGSQGEEGKRGPTGELGATGPAGSRGARGASGSRGMPGSEGRTGPVGMPGARGSTGSG GPRGPPGDAGRAGEPGSAGLRGLPGSPGSSGPPGKEGPAGPAGQDGRTGAPGPAGPRGQP GNIGFPGPKGASGENGKPGEKGATGPTGLRGAPGADGNNGGTGVMGPAGGPGEKGEQGPS GAPGFQGLPGPAGPGGEAGKAGDRGIPGDQGLAGPAGAKGENGSPGAAGASGAQGPMGAR GPAGAPGADGGKGEPGAAGAAGGPGHQGPGGMPGERGGAGTPGSKGEKGEGGHRGPDGNS GRDGARGMPGPAGPPGPTGANGDKGEGGSFGPAGPAGPRGGSGERGEVGPAGAPGFAGPP GADGQPGARGERGPSGLKGEVGPSGPSGPAGQSGPAGPSGPGGPPGARGDNGPPGLTGFP GAVGRMGTPGPTGIVGPPGLAGPAGKDGPRGLRGDSGPAGPSGEQGMVGPPGPSGEKGPS GESGPPGSPGAPGTGGPLGLQGFVGLPGARGERGTPGGAGSLGEPGRAGPAGPPGARGPP GNTGLPGMTGPQGEAGREGNTGNDGPPGRPGAAGFKGDRGEPGSAGSMGLAGTPGPAGPS GAAGRPGNRGESGPSGSSGNVGPAGARGAAGPSGPRGEKGVAGDKGERGMKGLRGHAGLQ GMPGPSGPSGDTGAAGPAGPSGPRGPAGPHGPAGKDGRAGGHGTIGAPGSRGAPGYIGPA GPAGAPGLPGPPGPAGGGYDVSGYDEYRADQPALRAKDYEVDATIKSLNTQIENLLTPEG SRKNPARTCRDIKLTHPDWSSGFYWIDPNQGSSSDAIKVFCDFATRETCIYAHPESIARK NWFRSTENKKHVWFGETINGGTEFTYNDETLSQQSMATQLAFMRLLSNQASQNVTYHCKN SVAYMDGESGNLKKAVLLQGSNDVELRAEGNSRFTFSVLEDGCTRHTGDWSKTVIEYRTN KPSRLPILDIAPLDIGGADQEFGLDIGPVCFK NT seq 4059 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacccggattctgttgctgcttgcagtaacttcatacctagca tcatgtcaatatgcgggtcccagaggagacaaagggcctcgaggtgacaggggtcctaag ggcccagatggaagagatggcaaacctggactccccggccccgctggcccccctggtccc cctggactcggaggaaactttgctgctcagtacgatggttcaaaagcccctgatgccggc cctggacccatgggtataatgggagctagaggcccacccggacctccgggatccccggga cctcagggacacacaggacatgctggtgagcccggagagcccggtcagactggccccgtt ggtgctcgtggcccccctggaccccctggcaaatctggagaggacggtaacaatggcaga cctggcaagcccggtgacagaggtacccccggccctcagggtgctcgtggattccccgga acccctggacttccaggaatgaagggacacagaggttacactggtctggatggacgcaag ggagagcctggtgccgctggcgccaagggtgagcctggtgcccatggagcttctggaagc cctggactggctggatctcgtggtatgaatggtgagagaggtcgtgctggccctgctggc cctgctggtgctcgtggtgctgatggcaatgttggccccgccggccctgctggtcccgtt ggtgctgctggtcccccaggtttccccggtggccccggccccaagggagaggttggaggt gctggatctactggcccagctggacctcagggatctagaggagagcccggtcccaatggt gctggcggccccgttggtcccgctggtaaccctggtgctaatggcctgaacggagccaag ggagctgctggcgcagctggtgtttctggagctcctggcttccctggaccaagaggagga cctggaccccagggtcctcagggtgcttctggacccagaggcctcgctggagatcctggt actcagggtgttaagggagactctggtcccaaaggagagcctggtaactctggacctcag ggagcccccggatctcagggtgaggagggcaagagaggacccactggtgagcttggtgcc actggccctgctggcagccgtggagctagaggtgcttccggcagccgtggtatgcccggt tctgagggaagaactggccccgttggcatgcccggtgcccgtggttccactggttcaggt ggacctcgtggaccccctggagatgctggtcgtgctggtgagcccggctcagctggtctc aggggtctcccaggaagccccggaagctctggacccccaggaaaggagggacctgctggt cctgctggacaagatggccgcactggagctcccggcccagctggacctagaggccagccc ggaaacattggcttccccggacccaaaggagcttctggtgagaatggcaagcctggagag aaaggagccactggccctactggactgagaggagcccctggagctgatggcaacaacggc ggcactggcgtcatgggacctgctggcggtcctggtgagaagggagagcagggaccctct ggagctcctggcttccagggtctgcccggccccgctggacccggtggagaggctggaaag gccggagacagaggtatcccaggagaccagggacttgctggacctgcaggtgccaaggga gagaatggtagccctggtgctgccggagcttctggagctcagggaccaatgggagcccgt ggacctgctggagcccctggagctgatggtggcaagggagagcctggcgctgctggagct gctggtggtcctggacaccaaggacctggtggcatgcctggtgagcgtggaggtgctggt acccctggatccaagggagagaagggagagggtggacacagaggccctgatggcaattct ggcagagatggtgcccgtggtatgcctggacccgctggaccccctggacccactggagcc aatggtgataagggtgagggtggttccttcggacctgctggacccgctggacctcgtgga ggctctggagagcgtggagaggttggacctgctggagctcccggattcgctggaccccct ggtgctgacggtcagcctggagcaagaggagagcgtggaccttctggacttaagggagaa gttggcccctctggcccctctggacccgctggacagtctggacctgctggtccttctggc cccggtggacctcctggtgcccgtggagacaacggtcctcctggtctgactggtttccct ggcgctgttggaagaatgggtactcctggtcccactggtattgttggacctcctggcctt gctggtcccgctggtaaggatggccctcgtggtctccgtggtgattctggtcccgctggt ccttctggagagcagggtatggttggaccacctggtccatctggagagaagggaccttct ggagagtctggtccacctggttcacctggtgctcctggaactggtggtcctcttggtctt caaggattcgttggtctgcctggtgccagaggagagcgtggtacacctggtggtgctggt tctttgggagagcctggcagagctggacccgctggtccccctggagcccgtggtccccct ggaaacactggtctgcctggcatgaccggacctcagggagaggctggacgtgagggtaac actggtaacgatggacctcctggtcgtcctggtgctgctggattcaagggagaccgtggt gagcctggatctgctggttccatgggacttgctggtacccctggacctgctggacccagt ggcgctgctggcagacctggaaaccgtggagagtctggccccagtggttcctctggaaat gttggccccgctggagctagaggtgccgctggaccttcaggaccccgtggtgagaaggga gtcgctggagacaagggagagagaggcatgaagggtctgcgcggacacgctggtctccag ggaatgcctggaccttctggaccctccggtgacactggagctgctggacccgctggacct tctggacccagaggacctgccggaccccacggacccgctggtaaggatggaagagctggt ggccatggaactattggtgctcctggttctcgtggagcccctggatacattggacctgct ggtcctgctggtgctcccggtctgcccggacctcccggccccgccggtggtggatatgat gtctccggatatgatgagtacagagctgatcagcccgctctgagagccaaggactacgag gttgatgccaccatcaagtccctcaacacccagatcgagaacctgctgacccctgaggga tccaggaagaaccctgcccgcacctgccgtgacatcaaactgacccaccccgactggagc agcggtttctactggattgaccccaaccagggcagcagcagtgatgccatcaaggtcttc tgcgacttcgccacccgcgagacctgcatttatgcccaccctgagagcatcgcccgcaag aactggttcagaagcaccgagaacaagaagcacgtctggttcggagagaccatcaacggt ggtactgagtttacctacaatgatgagaccctcagccaacagagcatggccacccagctg gccttcatgcgcctgctgtccaaccaggctagccagaacgtcacctaccactgcaagaac agcgttgcctacatggatggtgagagcggcaacctgaagaaggctgtgctgctccagggc tccaacgatgtggagctgagggctgagggcaacagtcgcttcaccttctccgtgctggag gacggctgcactagacacactggtgattggagcaagacagtgattgagtacagaacaaat aaaccatctcgcctgcccatcctcgacattgcacctttggacattggtggagctgatcag gagtttggtttggacattggcccagtctgtttcaaataa

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