Scophthalmus maximus (turbot): 118291989
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Entry
118291989 CDS
T09850
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118291989 (vps50)
Membrane trafficking [BR:
smau04131
]
Protein recycling
Others
EARP complex
118291989 (vps50)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
118291989
NCBI-ProteinID:
XP_035476479
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Position
22:complement(4354229..4455078)
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AA seq
993 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELREMREQSIDPQAEQEIINSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKNFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHCTMQWHEEHDKQESAPTPDD
AAAAKSDELVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDIIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQATSATTPSQEELSLFQQFLLEGNPFEMHIEQKEEETED
VLASNGYESDELEKSAYQDYDSDSDVPEELKQDYVDEQTGDAPLKSVSRETMRSKKKSDY
NLSKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPVPSPSLPTRGGRDVGPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMEAFGE
SAGVHGQAEDRKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLD
TMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIREIMSQ
HNVYVDVLLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctcatggcccggcagggcctgaagagcccccaggagagcatg
gcagacctcagtccggtggagaacctcaggatccccagcaaggaggagttgcgggagatg
agggaacagtccatcgacccccaggcggagcaggagatcatcaacagcatcgaggaggtc
tacttctccaacgactccttcgacatggtgcagcacgaactggagaaactcccacctgag
ctgaacctgcaggagctggaggagtatcgagacaaactgaagagacaacaggcagcagtt
tctaaaaaggtcgcagatctcattctggagaaacagcctgcttatgtcaaggaactggag
cgagtgaccgctctacagaccaacctgcagctggcagctgtcatttgcactaatgcaaga
agacaactgagcgtggcaaaggagggattcacggaggccagcctgggtctactggccaat
cagaggagaagacaactgctgacaggcttgctgaagtcactgagaaccatcaagacactg
caaagaacagatgtacgactcagcgagatgcttgaggaggaagactacccaggtgcaatc
cagttgtgtctggaatgtcagaaagctgccagcacctttaaacactacagctgcatcagt
gaattgaattccaaactgcaagacaccctggaacagatagaggagcagcttgatgtcgcc
ctgtcgaagacctgtaaaaactttgatgtttcgcactacaccaaggtccagctggcttac
acgctcctgggcaagacgcagaccgccatggaccaactgcacatgcacttcacccaggcc
atccacaacaccgtgttccaagtggtgctgggatacgtggagctgtgtgccggcaacgct
gacaccaagttccagaagatgcaatacaaggacttgtgcacgcatatcaccctggacagc
tacatcccctgcctgaccgatctgtgcaaggcattgtgggaggtgatgctgagctaccac
tgcaccatgcagtggcacgaggagcacgacaagcaggagtctgcacccactccagatgat
gcagcggcagcaaagtctgatgagttggtcgtggaccgcagctatgtgaagaagaaactg
gagcatggactgacacggatctggcaggatgtccagttgaaagtgaaggcctacatcctg
gggacagacatgtctaacttcaaatatgatgatttcatagtggtactcgatatcatcagc
aggctgatgcaggtgggcgaggagttctgcggcagcaagtctgaggtcctgcaggagtcc
atcaaacgccagagtgtcaactacttcaaaaactatcacagggcacgactggaagaacta
aggatgtttctggaaaatgagacgtgggaactttgtcctgtcaagtccaacttcaacatc
gcccagctccatgagtttaagttcatgggccagtgtcgctctccgtccgtttccccgagc
agacaggccacgtccgcgaccactccgtcacaggaggagctgtctctgttccagcagttc
cttctggagggaaacccttttgagatgcacatcgagcaaaaagaggaagagactgaggat
gtgctggcatcgaacggatatgagtcagacgagctggagaagagcgcgtatcaggattac
gacagcgacagcgatgtccccgaggagctcaagcaggactacgtggacgagcagacgggt
gacgcccccctcaagagtgtgtcccgagagaccatgagaagcaagaagaagtctgactac
aacctaagtaaaaccaatgcaccaatcctcaccaacaccaccctcaacgtcatccggctt
gttggaaagtacatgcagatgatgaacattctgaagccaatcgccttcgacgtcatccac
tgtgtgtcacagctcttcgactactacctgtatgctgtgtacaccttctttggacgcaat
gacatgcccgtgccaagcccttctttgccaactcgtggtggcagagacgtgggccctgcc
agggtggtgggccctgcttgcttgtatgagtcatcgggcctgggccttatcagcagcaga
ctgagaaccacactgaaccggatccaggagagcctcattgacatggaggcgtttggggag
agtgcaggagtccacggccaggcagaggacaggaaggagaaggttcctagcccacatctc
agccaactggtggtcctcacaaacagtggtactctctatgggctagcacagagggtggtg
gctactgagtctcttgtgtttctggctgagcagtttgagtcccttcagtcccacctggac
acaatgatgcctgcagccaagaagcctttcctgcagcagttttattcccagacggtttct
acagccagtgaactgcggaaaccaatatactggattgtggcagccaaggccatcgactac
gaacaaatgctcctcctgatggccggagttaaatgggacattagggagataatgtcacag
cacaatgtatatgtggacgtcctgttaaaggagtttgagcagtttaacaagcggctgggt
gatgtttccagacatgtgcgcatcccactgcctgtgtccaacgtcctgtgggagcactgc
atccgtctggccaacaggactcttgttgagggatatgctaatgtgaagaaatgcagcaac
gagggccgcgccctgatgcagctggacttccagcagttcctcatgaagctggagaagctg
acggacctgcgacccatccccgacaaagagtttgtggagacctacatcaaggcttattac
ctgacggagaacgacatggagcagttcatcaagaaccacagggagtactccatgaagcag
ctagccaacctggtgaatgtttgcctgggctcgcacataaacaagaaagctcgccagaaa
ctcctggcagccatcgatgacattgacagacccaagagataa
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