KEGG   Scophthalmus maximus (turbot): 118292127
Entry
118292127         CDS       T09850                                 
Symbol
polr1f
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA43
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118292127 (polr1f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smau03021]
    118292127 (polr1f)
Transcription machinery [BR:smau03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     118292127 (polr1f)
SSDB
Motif
Pfam: RPA43_OB SHS2_Rpb7-N Sipho_tail XRN_M
Other DBs
NCBI-GeneID: 118292127
NCBI-ProteinID: XP_035476718
LinkDB
Position
22:complement(4601442..4605045)
AA seq 373 aa
MANLEHAEDDPKHANMSAEIPAACAEDVRPAEPSPGPDRDAGSIPSFAAASELLSAPYSC
LVMNTHRRHVALPPMYLHKKRTGIQGELEAELLKFSESLKGVPLAYNNIRIMGQHGGIYD
DSSYIHMDIEANFIVFQPKKGQKLLGKVNKLGVSHVGCLVHGCFNGSIPKPNLVSMETWR
DAGPRIGSELEFEVTAIDADTAGVLLIRGRLDRTRVQELMAMGESSESSVAAEQPDTEPK
PETMEESPDETPRKKKKKKKDKEETKEDVTPSCEQERITTQELNGATDEANGNGEGEKKK
KKKKKEKCLKEEEEELELSPLDVQGSDSSGYVSDKPSKKRKHETGSDVISSFSDVPETPK
SKKKRKSNIEQFA
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcgaacctggagcatgccgaggacgacccaaaacacgcgaacatgtctgctgaaatc
cccgccgcctgcgccgaagacgtccgaccggccgaaccgtcccccgggccggacagagac
gcgggctcgatcccgtcgttcgccgccgcctccgagctgctgtcggcgccctactcgtgc
ctggtcatgaacacgcaccgcagacacgtcgccctaccgcccatgtacctgcacaagaag
aggacaggcatccagggggagctggaggccgagctgctcaaattctcggagagtctgaaa
ggagtccctctagcctacaacaacatcagaataatgggccagcacggaggtatctacgac
gacagcagctacatccacatggacatagaggccaatttcattgtgtttcagcccaaaaaa
ggacagaaactgctgggtaaggtgaataaactcggagtgagccatgtgggctgcctggtg
cacggctgtttcaacggcagcattcccaaaccaaacctggtctctatggaaacctggagg
gacgcagggccgaggatcggatcagagctggagtttgaggtgactgcaatcgatgctgat
actgcaggggtgctgctgatcagaggacggctggacagaaccagggtccaagagctgatg
gctatgggtgagagctcagaatcgagcgttgctgcagagcagccagacacagaaccaaag
ccagaaaccatggaggagtctccagatgaaactcccaggaaaaagaagaaaaagaaaaaa
gacaaagaggagacaaaagaagatgtgacaccctcctgcgaacaggagcgcatcacaaca
caagagctaaatggtgcaactgatgaggcaaatggcaacggagaaggtgagaaaaagaag
aagaaaaagaagaaggagaaatgtctgaaagaagaggaggaggagcttgagctctctccc
ttggacgtccaagggagcgactccagcggctatgtcagtgacaagcccagcaaaaagaga
aaacacgaaactggtagcgatgttatatctagttttagtgacgtacctgaaacacccaaa
tccaagaagaagaggaaaagcaacattgaacagtttgcctga

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