Scophthalmus maximus (turbot): 118292205
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Entry
118292205 CDS
T09850
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
smau03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118292205 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118292205 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118292205 (nup153)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118292205 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
118292205
NCBI-ProteinID:
XP_035476838
LinkDB
All DBs
Position
22:6520674..6536510
Genome browser
AA seq
1568 aa
AA seq
DB search
MTAIRRRNNDRRSNDRAMAATGGGKIRSRRYHIASKPYAKSKQQQSGIISRVTDTVKSIV
PSWLQKYFKNEDATEGEGAVQGTGQNCQPPPPPPPPPNGSEEGPPPLDGRDSPEPSTSNT
EPSTSRASLNFQEYVLSRPPLSRSHLHFAPLEASSPNLVASSSLFSPPSTSSAPGPFSTG
FSLVKEIKDNLSQHEDDNISTTSGFSSRASDKDVPASKTASLPQLWSPEMDRTNSGPQPS
QSSLKKPAFNLSVFGSSSNSTFNGTVLNSSQLGDSPFYPGKTMYGGAAAVRSSRSRPGTP
YQAPVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPAAASPLSPLMDGP
NHDVPYFQSKRKRMDSTLPPVQRLVVPAAASVSGNRSVSFRPTLTPGGVSRNLDRTPRET
PTRQSPQLPKATPFSQSTMGSSVPAYPLSSTPAASSISSGGGKMKRERTSTRPSTKRLEE
DEVVEVPDLPAISLPISSSTLPTFSFSTPPPPPATSYTASTVTAVTPAKGTFANKEPPTA
STPLCVPFTFSSPIVKATAASPPSFSPSAGFTFSAPVAKLAPTMSNGKLSTPIAVAEEFE
GPFKPAKALKQGSVLDLLKAPGFASPVAQPSSGPDNSLQPTSTQSTASSSSTSSSTSSSS
LSSSTGFGDFFKSPLNWTCDVCLVPNKPSDAKCVCCMAPQPNSSSSKPMDSKPSPTTFVR
LESSSSSSSSTNTTSSTTTTTTGFGTMFSKPAGTWDCDTCLVLNKPEAVKCVACETAKPG
TGLKPSLTLPSAFSAVKTVAPPTAPVSTGFVGFGDKFKKPEGAWECDTCLVENKAEDTKC
VACMSAKPGAATATSAGASVGSSSSASSAPVFGLADKFKKPEGAWDCDVCLVQNKAADVQ
CVACQTAKPGANVEPKAFGSSAGGTSGSSTSGGFKFGTSDSTSGSGSGGFKFGTSDSTSG
SGSGGFKFGTSDSTSGSGGFKFGGSNSELSSSSGGFKFGNQSGSSSSETTKDTSASSGFK
FGSSSEGFKFGTASDDDKKSDQPSTGSGLKFGASGGIMFGTGSFSTENNTSKGGFTFGLS
KTEEKILDTPTSSSASFTPPAPPQGKSESAASSDDTTSANNNATTTTTATAGSVFGRLGK
PTMATTTPQGGATFGSLQTDKEPAAPTFSFGKPEEKKERAASPAPSSFLFGPASKDADAT
PAPAPSSGFSFSKPSALTDQPPPPYPFGKAADKSITSVAEAPKPSFTFGQSATDSAAAGP
KPAFSFIASNPTNTTNSTTSSSSIPTPSLFGSSSSSSSTQAPAASAAPSTFMFGQPAAAS
TDAPPAKAFVFGQNQDSQPPAPSAAPLNSVPAPATAQPFIFGVSAKAAPPAAAAAAAAAA
AAAPPPPSFSFGAPPPAASSSGLSLAPSTAPSPFAFSSAPAGGFGANPTPSFGSSFGTSF
TAGPPQAPAFGASSEAAPVFGQQVNSTPVFGAAANSAPGGGFQFGGASAFGVTNNTSGVF
TFGVGSAASPAPSANPPIAPQPGTPGGGFSFAQPPSFNIGSTKSFVASPAGQQAIAGRKI
KTAVRRRK
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacaacgatagacgctcaaacgacagagccatggcggcc
acgggtggagggaaaattagaagcaggagatatcacatcgcctccaaaccttacgccaag
agtaaacagcagcagtcaggcatcatcagtcgggtgacggacacagtaaagagcatcgtt
ccttcctggctgcaaaaatacttcaagaatgaagatgctactgaaggagagggggctgta
caagggacaggccagaattgccagccgccgccgcctccgcctcctcctcctaatggcagt
gaagagggacctcctccccttgatggacgtgactccccggaacctagcaccagtaacacg
gagccctccaccagtcgggcatcgctgaactttcaggagtatgtcctttctcgaccccct
ctgagtcgctcccaccttcattttgccccgctggaggcttcctctccaaatctggtggct
tccagcagcctcttctccccgccctccacctcctcagcccctggacccttttccacaggc
ttctccttggtgaaagaaatcaaggacaacctctcacagcatgaagatgataacatctcc
accacaagtgggttctcctcccgcgcctctgacaaagatgtccccgcttcaaaaacagca
tcactgccccagctttggtccccagagatggacagaacaaactctgggcctcagccttcc
cagtccagtctgaaaaagcctgctttcaacctctccgtttttggatcgtcttccaattca
acatttaacggcacagtgctgaactctagccaacttggagattcaccgttctaccctggg
aagaccatgtatggtggggcagctgcggtcaggagctctcgctcacgtcctggaacacca
taccaggctccagtgaggagacagatcaaggccaagcctgctggagctcagccctgcggg
gtgactagtgccacagccagacgcatcctgcagtccttggagcgcatgtcaagccctctg
gctgatgccaagagaatcccagcagcagcatcccccctgtcaccattgatggacggccca
aatcacgatgttccttatttccagtcaaaaaggaaacggatggattctaccctcccaccg
gttcagagattggtggttcctgctgcagcctcagtgtcaggaaaccgctccgtgtccttc
aggccgactttgactccaggaggagtgagccgaaacctggacaggaccccaagagagacg
cctacaagacaatcacctcagttaccgaaagcaacccctttttctcaaagcacaatgggc
tccagtgtcccagcctatcctctctccagcacgcctgcagccagcagcatcagctctgga
gggggcaagatgaagagggagagaaccagtacacgaccttccaccaaacgcctcgaggag
gatgaggtggttgaggttcctgaccttccagccatttcacttccgatcagctcctccacc
ttgcccaccttcagcttctccacccctcctccacccccagctaccagctacactgcctcc
actgtcactgcagttactcccgccaagggcacgttcgcaaacaaggagcctccaacagcc
tcgacacccctctgtgtaccttttacattttcctcccctattgtgaaagcaactgctgcg
agcccaccttccttttccccttcagctggatttacttttagtgctcctgtagcaaagttg
gctcccacaatgtccaatgggaagctatccactcccatagcagtagcagaagaatttgaa
ggacccttcaaaccagccaaggccctgaagcagggcagtgtgctggatcttctcaaagca
cctggctttgcctctcctgttgctcagccctcctcaggcccagacaattctcttcagccg
acctccacacaatccactgcctcctcctcctccacctcctcctccacctcttcctcctcc
ctgtcttcttcaacagggtttggagattttttcaaatccccgttaaactggacctgtgat
gtctgcttggtgccgaacaaaccatcagatgctaaatgtgtttgctgtatggcccctcag
cccaactcctcctcatcaaaacctatggacagtaagccttcacccacaacctttgtcagg
ctggagagcagcagcagcagcagcagcagcacgaacaccacctcctcaacaactacgacc
accacaggtttcggtacaatgttctcgaaacctgccggaacgtgggactgtgacacgtgt
cttgttctaaacaaacccgaggcagtaaagtgtgtggcctgcgaaacggccaaacccgga
acgggactgaaaccctcactgactcttccttctgccttctcagctgtaaagactgttgcc
ccccccacagcccctgtttccacagggttcgtcgggtttggagacaagttcaaaaaaccc
gagggtgcatgggaatgtgatacatgcttggtagagaacaaggcggaagacacaaagtgt
gtggcctgcatgagtgctaaaccaggtgcagcaacagcaacatctgcaggagcttcagta
ggatcgtcttcttcagccagctctgctccagtttttgggttggcggataaattcaagaag
ccagagggtgcctgggactgtgacgtctgtctcgtacaaaacaaggctgctgacgtacag
tgtgttgcttgtcaaacagccaaacctggagctaacgtggagcccaaagcttttggttca
tcagctggtgggacttcaggctcctctacctctggaggttttaaatttggcacgtctgac
agtacctcagggtctggatctggaggtttcaagtttggcacgtccgacagtacctcaggg
tctggatctggaggtttcaagtttggcacgtctgacagtacctcaggatctggaggtttc
aagttcggaggctcaaattcagaactctcttcttcttccggtggattcaaatttggaaac
caatctggaagctcctcatcagaaaccactaaggacactagtgcctcatcagggttcaaa
ttcggcagctcaagcgagggctttaaatttgggactgcctctgatgatgacaaaaagtca
gaccagccgagtacaggttctgggttaaagttcggagccagtggtgggataatgtttgga
acgggatcatttagcacagaaaacaacacttctaagggtggcttcacctttggactgtcg
aaaactgaagagaaaatattggacacccccacctcatcctccgctagtttcactcctcct
gctccccctcaaggaaagagtgagagtgctgcatcatcagacgacaccacttcagcaaac
aacaacgcaaccaccaccacaacagccaccgctgggtcggtgtttgggagactgggaaag
ccaactatggcaaccaccacaccacaaggaggtgctacgtttggatccttacagacagac
aaagagccagctgctcccaccttttccttcgggaagcccgaggaaaagaaagaacgcgct
gcttccccagctccatcttcgttcctctttggccctgcgagtaaagatgcagatgccaca
ccagcaccggccccttcaagtggcttttccttcagcaagcccagtgcattaacagaccaa
cctccgcccccatacccctttggcaaggcagcagacaagagcataacatctgttgcagag
gctccaaagccctccttcacctttggacaaagtgctacagattcagctgctgctggtccg
aaaccagcattttcctttatagctagcaatcccaccaacaccaccaactccaccacctcg
tcctcctccatcccgacccccagtctctttggcagcagcagcagcagcagctccacccag
gctccagctgcttctgcagctcccagcactttcatgttcggtcagcctgctgcagcctcc
actgacgctcctccagccaaagccttcgtctttggacagaaccaggacagccagccgcct
gctccatcagcagctcctctgaactcggttccagccccagctacagctcagcccttcatc
tttggtgtttctgccaaagctgctccccctgctgctgctgctgctgctgctgctgctgct
gctgctgctcctcctcctccatccttcagttttggagcaccaccacctgctgcctcatcc
tctggtctgtctcttgctccgtctacggccccctctccgtttgccttcagttcagccccc
gctggtggctttggggccaacccgactccttcatttggctcatcttttggtacctccttc
acagccgggcccccccaagcccctgcctttggggccagttctgaagctgcccccgtgttt
ggacagcaggtgaactccacacctgtatttggggcagcggctaattctgcaccaggtgga
ggctttcagttcggaggagccagcgcatttggagtcacgaacaacacctcgggtgtgttt
acttttggagtaggttcagcagcttctcccgctccctctgccaacccccccatcgcaccc
cagccaggaacacctggaggtggattcagcttcgcacaaccaccatcatttaacattggg
tcgactaaatcctttgtcgcctcccctgctggacagcaagctatcgcaggacgcaagatc
aagacggcagtgcggcgcaggaagtag
DBGET
integrated database retrieval system
