Scophthalmus maximus (turbot): 118292318
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Entry
118292318 CDS
T09850
Symbol
efna1a
Name
(RefSeq) ephrin-A1a isoform X1
KO
K05462
ephrin-A
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118292318 (efna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smau04052
]
118292318 (efna1a)
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118292318 (efna1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smau00537
]
118292318 (efna1a)
Cytokines and neuropeptides [BR:
smau04052
]
Cytokines
Growth factors (RTK binding)
118292318 (efna1a)
Glycosaminoglycan binding proteins [BR:
smau00536
]
Heparan sulfate / Heparin
Axon guidance molecules
118292318 (efna1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smau00537
]
Others
118292318 (efna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
118292318
NCBI-ProteinID:
XP_035477079
UniProt:
A0A8D2ZNW3
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Position
22:9285376..9300011
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AA seq
227 aa
AA seq
DB search
MDLVWIVGFVVSVCARFASAERHSVSWNSTNPKFLWDDYAVEVRLNDYLDIVCPHYPEGE
VPLLDAERYVLYMVEREDYDSCKPQSYDQMRWECGHPFAPHAPEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLRVDVVAADGSQEARVAKGGTGGAGVGAGGGVHNPS
NRLPAADDPVVILPDVQKSVRTNSAVAATSLSILSLLVPFSLLLLLH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtttggatcgtgggcttcgttgtgagcgtctgcgcccggtttgcgtcggcg
gagcggcacagtgtctcctggaacagcacgaacccaaagttcctatgggacgactacgct
gtggaggtgaggctcaacgactacctggacatcgtctgcccccattaccccgagggcgag
gtgccgttgctggatgccgagcgatacgtgctctacatggtggagcgcgaggactacgac
tcctgcaagccccaatcatacgaccagatgcgttgggagtgcggccatccgtttgccccg
cacgcccctgagaagttctcggaaaagttccagcgctttactccgtttactctggggaag
gagttccgccaaggagaaagctactattatatctccaagcctttgcaccaccacggacaa
gagtgcctcaggctcagggtggacgtcgtagcggccgatggctctcaagaggccagagtg
gctaaaggcggcacaggtggggccggagtcggagccgggggtggagttcacaacccatcc
aacagattgcctgcagcagatgacccagtggtgatcctgccagatgtccagaagagtgta
cggacaaactccgcagtggcagctacgtccctctcaatcctctcattgctagtgccattt
tcattactgctattgttgcactga
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