Scophthalmus maximus (turbot): 118292333
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Entry
118292333 CDS
T09850
Symbol
grin2da
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04020
Calcium signaling pathway
smau04080
Neuroactive ligand-receptor interaction
smau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118292333 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118292333 (grin2da)
04082 Neuroactive ligand signaling
118292333 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118292333 (grin2da)
Ion channels [BR:
smau04040
]
Ligand-gated channels
Glutamate (ionotropic)
118292333 (grin2da)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF8168_N
Motif
Other DBs
NCBI-GeneID:
118292333
NCBI-ProteinID:
XP_047186282
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All DBs
Position
22:13786709..13932496
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AA seq
1994 aa
AA seq
DB search
MVAPRPALSLLLAILACTGPARPSPPLLLRPRERERDSGGVNIAVVHSGSSLLPETTGAV
GGAGVGQPGPGPGLGPGPGSGPGGGGGVGGGRGVTDTAALAGVAAMASLSSSLSSLSLAA
LVGETVMTPSGQANVIYLTVNESSPGSLLLQLCELLATTPLQGLVFEEERPPPPNRAPLA
PMLEFVSAQTGVPVVAVGGGASLGREPQESGSIYLQFTCATSLQLEVIFEVLEEYDWTSF
SVVTTRHHGYEDFLAMVEGMTDGSFIGWEKKSVVVLNVTDDPGGARTKRLLKDNEAQVRL
LYCSLEEAELVFRAAWAAGQAGPSHMWFAVGPALSGLGLEGLPKALFAIRPQGWRDEPRR
RIAKGVSVLTHGAMALRRDLGASSRSQYAGNCQSDGNQTHRVTDRIRYFTNISIGGRDYS
FNSDGYLSNPLLDVISYTNGRGWEEVGWWENGHLRLRYHPWSRYGSFLKPLDDSQHLRVV
TLEERPFVIVEPADPGTSSCIRDSVPCRMPVNTSLVVDGTGPMKHCCKGFCIDVLKRLAK
IVGFTYDLYLVTNGRHGKNIDGEWNGMVGEVVSNRADMAIGSLTINEERSEVVEFSVPFV
ETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQ
SAKKSGGSKFTIGKSVWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANL
AAFMIQEEYIDTVSGLSDKKFQQPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQYMIRNN
QKGVEEAIDNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALNKNS
RWKRPLDLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMG
LSLLVFAWEHLVYWKLRHCVKRSGGMDFLLALSRGMYSCCQFEDETGPGGSKSSLPQYHT
MTTMPAAAQQHLVTATINNTAAIAMVQQQQQQKHHQQQQQGQTYTTMLPGSPPTTGHSAM
ALGPSNSPLLEGPMPCSTFLPRHDRRLAVVDRWNRPKPEKVMSGGSGGGVGIGGIAGGIT
ELQAQQQQYQQNLGQHWSLQGGVAGGVGGGGDTGLDEYKRYYGPIDPEGLGTNLDQQAVG
PQQTPKANPRGPKASGIPRLPAKGPQQGPTHLIPQPPPPIPSSPRRPPFWRRGSLAQARR
KGSGGPLYENILPLGRRGGGRYGASDGGGRRGRRPPPPPPLPVPLSSPTHTPTTPSSPCR
FYSSCSSASSSSTSSTSSSSSSSSSVSLSRSNSPSSCSSDSSYNSSLSFRYRAGDRDFMA
EDDYDSDLLTEESSLLLGSRRKIRSRRMSSRSLPCSPPPPPIPPRKPRPQKDYGRERTGS
QLTQLQEWWASWGDRERGKGGTTSRGDGGVSREEKRHHKERERERKRRKKGRKKKKREER
ERERERKRRKAKKKRKKDDKSRKRERKRSEQEGGDPEKREEIKSGTPDFPSYPSLRRESF
RKKSESSIRSYGWNIPGEDERREREEKERDDGEDSRGKEKHLRRRNSKHYQGSSSKPLTS
VKFWGGGNPSSDTIPSAFLPLLPVTSKRRKSKSSDRDAVKVEGERRPLLERDGRGEMHSK
EGLSFHEWESEQEDEEEDSEQERMKAERGKRRGARRTMSDEERERDKVVGIYSDDDGSSG
EFGKFERYWEDHEGRAVGGIGGGGWFFSTYPSRDKVGSINSRDDLFLERGERWGTAEIGW
GSSGGGGGGGGNGEERGWGSGSHWPPPPLTPPPPRRYWSVDKLHIQDEKKSKRKSKDKGR
GHTAYSSCHSPRHHPHSHSSKWARVTSRSQEELYRHCQSFGVPLKPKHDSSSSSKPDRSQ
NPSKSGSQLNLSIQQRTQRTDRDRGRQPSPPPTLIPNLPPSLPALPAPPSSSHSIHVPPP
TSSSSVSSPSVVSSTPGAPQSSSMASASAKLQYQRLRSVPQPQRFPQSPHLPLKAKSLCS
RRGSAHFSSVESEV
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atggtggccccaaggcctgccctctcactgctattggcgatcctggcctgcacggggccc
gcacgcccctcgccccccctgctgctgcggccccgggagagagagagggactcgggtggg
gtcaacatcgccgtggtccactcgggctcctccctactcccggagacaaccggagcggtg
ggaggcgcgggggtcggccagccggggccggggccagggctggggcccggtccggggagc
ggtccggggggaggaggaggagtaggaggaggaaggggagtgacggacacagctgcgttg
gccggagtggctgcgatggcctcgttgtcctcctccctgtcgtccttgtcgctggcggcg
ctcgtgggggagacggtgatgacgccgtcgggtcaggccaatgtcatctacctgactgtg
aacgagagcagcccgggcagcctgctgctgcagctgtgtgagctgctggccaccacacca
ctgcagggtttggtatttgaggaggagaggccgccgccgccgaaccgcgcccccctggcc
cccatgctggagttcgtctctgcgcagacgggggttcccgtggtcgccgtcgggggaggg
gccagtctgggacgagagccacaggagagcggctccatctacctccagttcacctgcgcc
acctcgctgcagctggaggtcatcttcgaggtgctggaggagtacgactggacctccttc
tccgtggtgaccacccgtcaccacggctacgaggacttcctggccatggtggagggcatg
acggacggctcgttcatcggctgggagaagaaaagcgtggtggtcctcaacgtgacggac
gaccccggcggggcgcgaaccaagcggctgctcaaagacaatgaagcccaggtgcgtctg
ctgtactgctccctggaggaggccgagctggttttccgggcggcctgggcggcgggtcag
gccggccccagtcacatgtggttcgccgtgggacccgccctgtccggtctgggcctggag
gggttgcccaaggccttgttcgccatccggccgcagggctggagggacgagccgcgcagg
cgaattgccaagggcgtctctgtgctcacccacggggccatggctctgcggcgggacctg
ggggccagcagccgctcgcagtacgcagggaactgccagagcgacggcaaccagacccac
cgggtgaccgacaggatcaggtacttcaccaacatctccatcggtgggcgggattactcc
ttcaacagcgacggctacctgtccaacccgctgctcgacgtcatctcctacaccaacggc
agaggctgggaggaggtgggctggtgggagaacggtcacctgcgtctacgttaccacccc
tggtcccgttacggctccttcctgaagcctctggacgactcccagcacctgcgggtggtc
accctggaggagaggcccttcgtcatcgtggagcccgccgaccccggcaccagctcctgc
atccgggactcggtgccctgccgcatgcccgtgaacaccagtttggtggtggacggcacc
gggcccatgaagcactgctgcaaaggcttctgcatcgacgtcctcaagcgcctggccaag
atcgtgggcttcacctacgacctctacctggtgaccaacggccgacacggcaagaacatc
gacggcgagtggaacggcatggtcggagaggtggtctccaacagggcggacatggccatc
ggctccctcaccatcaacgaggagcggtcggaggtggtggagttctccgtccccttcgtg
gagaccggcatcagcgtcatggtgtcgcgcagcaacggcaccgtgtcgccttccgcgttc
ctcgaaccctacagcccggccgtgtgggtgatgatgtttgtgatgtgcctgtcggtggtg
gctgtcaccgtcttcatctttgagttcttcagccccgtgggatacaaccgcagcctgcag
agcgccaagaagtcaggtgggtccaagttcaccatcgggaagtcggtgtggctgctgtgg
gcgctggtcttcaacaactccgtgcccgtggagaatccccgaggaaccaccagcaagatc
atggtgctggtgtgggctttcttcgccgtcatcttcctggcctcctacaccgccaacctg
gccgccttcatgatccaggaagagtacatcgacacggtgtcagggctgtcggacaagaag
ttccagcagccgaccgagcagtacccgccgctgcgcttcggcacggtgccgaacggcagc
accgaggagaacatccgctccaactaccccaacatgcaccagtacatgatccgcaacaac
cagaagggcgtggaggaggccatcgacaacctgaagaccgggaaactggacgccttcatt
tatgacgcggcggtgctgaactacatggcccggaaggacgagggctgcaaggtgatgacc
atcggctcgggcaaggtgttcgccaccaccggctacggcatcgcgctcaacaagaactcc
cgctggaagcgacctctggacctggctctgctgcagctggtgggcgacgatgagattgat
atgttggagcgtctctggctgtcggggatctgccacaacgataagatcgaggtgatgagc
agtaagctggacatcgacaacatggcgggggtcttctacatgctgctggtggccatgggc
ctcagcctcctggtgtttgcctgggagcatctggtgtactggaagctgcggcactgcgtg
aagcgatctggagggatggacttccttctggctctcagcaggggaatgtacagttgctgc
cagtttgaggatgagacgggaccaggaggcagcaaaagctctctgccccagtatcacacc
atgaccaccatgcctgctgccgcccaacaacaccttgtgacagccacgataaacaacact
gctgccattgccatggtccagcagcaacagcagcagaagcaccaccagcagcagcaacaa
gggcagacctataccaccatgctacccggatcaccgccaactacaggacactcagcaatg
gctctgggtccatcaaatagccccttgctggaaggccccatgccatgctccactttcttg
cctcgccatgaccgcagactcgcggtggtggatcgctggaacaggcctaagccagaaaaa
gtcatgagtggaggcagtggtggaggtgtgggcattgggggaattgcagggggaataaca
gaactccaggcccagcagcaacagtaccagcaaaatcttgggcagcactggagcctgcaa
ggtggagttgcaggtggagtagggggaggaggtgacacagggctagatgaatataagcgc
tactatggtcctatagatccagaggggctagggactaacttggaccagcaggcagtgggc
ccccaacaaactcccaaagctaatcctcgaggccccaaagcctcaggaattccacggttg
cctgccaaaggcccccaacaaggcccaacccacttaatcccccaaccccctccaccaatc
ccatcttctcctcgaaggcctcccttttggcgacgaggaagcctagctcaggcaaggaga
aagggctcaggaggtcccctgtatgagaatatactccctctggggaggcgaggtggtggg
aggtatggagcaagtgatggaggcggaagaagaggcagacgtcctcctccaccacctcct
ctgcctgtcccgctttcctcgccaacgcatacacccaccactccctcctccccatgccgt
ttctattcctcttgctctagtgcctcatcttcttccacttcctccacatcatcgtcgtcg
tcatcgtcatcctctgtctcgctctctcggtcaaattctccctcttcttgctccagtgac
agctcatacaattcctcactgagtttccggtatcgagcaggcgatcgagattttatggcg
gaagatgattatgactcagatctgcttacagaggagtccagcctcctcctggggtcacgg
aggaagattcgttcacgccgcatgtcatcacgctctttgccatgcagcccgccacctcca
ccaatccctccacggaaaccacgtcctcagaaagattatggcagagagaggactggcagc
cagctcactcaattacaggagtggtgggcatcatggggagacagggaacgagggaaggga
gggacaacaagccggggagatggaggagtaagtagggaagagaagaggcaccacaaagag
agggaacgtgaaaggaaaagaaggaagaagggccgaaagaagaagaagagggaggagagg
gaaagagaacgggagcgaaagcgacgtaaagcaaagaagaagaggaagaaagatgataag
agtaggaagagagaacgaaagaggtcagagcaggagggaggagatcctgaaaaaagagag
gaaatcaaatcagggacaccagacttcccatcatacccatctctgaggcgggagtccttt
cggaaaaagagtgagagctcaatcagaagctatggatggaacatcccaggtgaagatgag
aggagggaaagggaagagaaagagagggatgatggggaggacagcagaggaaaggaaaag
cacctccggcgaaggaacagcaagcactatcagggctctagcagtaagcctttgacatct
gtcaagttctggggagggggcaacccatcctctgacactattccatctgccttcctgccc
ttgttgcctgttacctctaaaaggaggaagagtaaaagttccgacagggatgctgtcaaa
gtggaaggagagaggaggcctttgttggaaagggacggaagaggtgagatgcattccaaa
gaggggttgtcctttcatgagtgggagtctgaacaagaggatgaggaagaggattctgag
caagagaggatgaaagcagagcgtgggaagcggcgtggcgcacgaaggacaatgtccgat
gaggaacgggaacgtgataaggtagttgggatatattctgatgatgatggttcttctgga
gagtttggaaagtttgagaggtactgggaggatcatgaaggtagagcggtaggggggatt
ggagggggaggttggtttttcagcacctacccctccagggacaaagtcggaagcatcaac
agtagagatgacctgttcctggagcgaggagagcgatgggggacagcagagattgggtgg
gggtctagtggtggtggaggaggaggaggaggaaatggagaagagaggggttggggatca
ggatcgcactggccccctcctcctctcacgccaccacctcctcggcgatactggtcagtg
gacaaactccacatacaggatgaaaagaagagtaaacgcaagtcaaaagacaaggggaga
gggcacacagcgtattcctcctgtcattccccgcggcaccatccgcactcccattcatca
aaatgggcccgcgtaacatcgcgaagccaggaagagttgtaccgccactgccagagtttt
ggtgttcccctgaagcccaaacatgactcctcctcctcctccaaacccgatcgctcacag
aatccatctaaatctggcagtcagttaaacctcagtatccagcagcggacacagagaaca
gatagggatcgaggaaggcaaccatccccacccccgaccctaatacctaacttgccaccc
tcgctccctgcccttccagctcctccgtcctcatctcactctatccatgttcctccccct
acctcttcttcgtctgtatcatctccctcagtggtctcatcaaccccaggggcgccccag
tcctcctccatggcttcggcaagtgccaaactgcagtaccagagattgcgttctgtaccc
cagccccagaggtttcctcagtctcctcacttaccacttaaagccaagagcctttgctcc
cgaaggggctcagcccatttctccagtgtggagagtgaggtctga
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