Scophthalmus maximus (turbot): 118292394
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Entry
118292394 CDS
T09850
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03250
Viral life cycle - HIV-1
smau03272
Virion - Hepatitis viruses
smau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118292394
03272 Virion - Hepatitis viruses
118292394
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118292394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118292394
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118292394
Membrane trafficking [BR:
smau04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
118292394
Exosome [BR:
smau04147
]
Exosomal proteins
Proteins found in most exosomes
118292394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF2226
Stn1_C
AAT
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
118292394
NCBI-ProteinID:
XP_035477212
LinkDB
All DBs
Position
22:complement(5657593..5672908)
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AA seq
876 aa
AA seq
DB search
MATFISVPLKKTSEVDLVKPLSKFVTAAYPASEEQAEYLRAVEELNKLRKNALGRPLDKH
ESSLEILLRYYDQLCAIEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNAAALASQIASEQNLDNDEGLKAAAKYYQLAGGAFGHIKDTVLSALNREPTMDISP
ETVCTLSHIMLAQAQEVFFLKATSDKMKDALIAKLANQAADFYCDAFKQCQYKDNLPKYF
YFQEVIPVLAAKHCIMQANAELHQSILAKQKKRFGEEIARLQHAADLVKNVASRYDEYVS
VKDLSDKINRALTAAKKDNDFIYHDRVPEVKDLEHICKAVLVKASPITPPLSQKFTDLFE
KMVPMAVQQSMSIYSQRKAETVNRLVGTMRETTNLCNGVLASLNLPAALEDLSGDSIPQS
IAEKARSVVQLGGLQSIEQLIKDLPELLTRNREILDESLKMLDNEETTDNELRTKFNQRW
NRTPSGDLYKPLRAEGGNFRDILDKAVQADQVVRDRYSAHGDMIALLCRPEDELNAAIPS
ANPTKTLQGSEVVNVLRSLLSQLDEMKKERETIEGEIKAVTFDMSATFLMALAQDGVLNE
EQLSLSQLDQLYGAYNQRVQATVRTQEELLGQVQTSHQEFSSLKQSNTEANQREEVLKKL
ASAHDSYVEISSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTEREELLKELQQSIARE
PSAPSFNVPAYQSTPAAGPTPAPRTVFPLQPQQAQQQPPAKPQPPTRPPPPSIIPQAAST
APTNTPATGPPSSNPPPMAPPSQAQGPPYPTYQGYPGYYQVPMGYNPYPYGQYNMPYMPY
QATPGQGGYPGAPPAGQPYPGYPQQPPQQQPYYPQQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtttatttcagtcccgctgaaaaagacctccgaagtggatctggtgaagccg
ctgtcgaaatttgtgacggccgcatacccggcgagcgaggagcaggcagagtacctccgc
gccgtggaggagttgaacaagctgcgcaaaaacgcgctgggaaggccgctggacaaacac
gagagctccctggagatcctcctgagatactatgaccagctgtgtgctatcgagcccaag
tttcccttctctgaaaaccagctctgcttaaccttcacatggaaggacgcctttgataaa
gggtcgctgttcgggggctcggtcaagctcgctttggccagtttgggttacgagaagacg
tgtgtgttgttcaatgctgcagcgttggccagtcagatcgcctcagaacagaacctggac
aatgatgagggactgaaggctgcagccaagtactatcagctggccggaggagcgttcggt
cacattaaggacaccgtcctgtcggcactgaatagggagcccaccatggacatctccccg
gagacggtgtgcaccctcagccacattatgctggcccaggcccaggaggtcttcttcctc
aaagctacttcagacaagatgaaagatgctctcatcgcaaagctggctaatcaggctgca
gatttctattgcgacgccttcaagcaatgccagtataaagacaaccttcccaagtatttt
tattttcaggaagtgataccggtgctggcggccaagcactgcatcatgcaggccaacgct
gagctgcaccagagcatccttgccaagcagaagaagcgctttggagaggagatcgcccgc
ctgcagcatgcagcagacttggtgaaaaatgtggcctcccgttacgatgagtatgtgagc
gtcaaggacctgagtgacaagatcaaccgagctctcactgctgccaagaaagacaacgat
tttatctaccatgaccgtgttcctgaagtcaaggatctggagcatatctgcaaggcagtg
ttggtcaaagcctctcccatcacacctccactcagccagaaattcacagacttgtttgag
aagatggttcccatggcggtgcagcagtccatgagtatttatagccagaggaaggctgag
actgttaacagactggtgggaacaatgagggagactaccaatctctgcaacggggtgttg
gcgtccctgaacctgccagccgccctcgaggatctgtcaggagactccatcccacaatcc
attgctgagaaggccagatccgtggtgcagttgggaggactgcagagcatcgagcagcta
atcaaagacctgcctgagctgctgactcgcaacagagagatcctggacgagtctctgaag
atgctggacaatgaagaaacgacagacaatgaactgagaaccaagttcaaccagcgctgg
aacagaaccccctctggagacctgtacaagccccttcgcgcagagggcggcaacttccgc
gacatcttggacaaagctgtgcaggccgatcaggtggtgagggaccgctacagcgcccac
ggcgacatgatcgccctgctgtgcagacccgaggacgagctcaatgccgccatcccctcc
gccaacccgaccaaaacattgcagggcagcgaggtggtgaatgtgctgcgctccctgctc
tcccagctggacgagatgaagaaggagagggagaccattgaaggagagatcaaggccgtg
acctttgacatgtctgccaccttcctgatggcactcgcccaggacggggtcttgaacgag
gagcagctctcgctctctcagctcgaccagttgtacggcgcctacaaccagagagtacaa
gccaccgtccgcacgcaggaagagctgctgggacaagtacagacgtcccaccaggagttc
agcagtctgaagcagtccaacacggaggccaaccagagggaggaggtcctgaagaagctg
gcttcagcccacgacagctatgttgagatcagcagcaacctgcgcgaaggcaccaagttc
tacaacgacttgacagaaatcctgcttaagttccagaacaaatgcagcgacattgttttc
gctcgcaagacagagcgggaagagctacttaaggagctgcagcagagcatcgcccgagag
cccagcgctccatccttcaatgtccccgcctatcagagcacccctgccgctggccccacc
cctgcacccaggaccgtattccctctgcagcctcaacaagcccaacagcagccaccagcc
aagccccagcccccaaccaggcctccacctcccagcatcatccctcaggcagcctccacg
gctcctaccaacacaccagccaccggccctccctccagcaacccaccacccatggccccg
ccatcccaggcccagggaccaccttaccccacttaccagggttacccagggtactaccag
gtgcccatgggttacaatccctatccctatggccagtacaacatgccctacatgccctac
caggcgactcccggacaaggaggatacccaggggcccctcctgctggacaaccctacccc
ggctacccccagcaacctccacagcaacagccctactaccctcagcaataa
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