Scophthalmus maximus (turbot): 118292419
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Entry
118292419 CDS
T09850
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smau01009
]
118292419 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118292419 (sfpq)
03041 Spliceosome [BR:
smau03041
]
118292419 (sfpq)
Protein phosphatases and associated proteins [BR:
smau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118292419 (sfpq)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118292419 (sfpq)
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118292419 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
118292419
NCBI-ProteinID:
XP_035477248
LinkDB
All DBs
Position
22:12659766..12676707
Genome browser
AA seq
629 aa
AA seq
DB search
MSRFNNNRGGLGGMNHFQARRGGPGGPMRGGLMGNPNFRSHPFQNQNQNRRGQNNSFNKP
NNQGPQVTPQKPQQLPIIPPPTPGPALTMKGPMQQQNAAAAAAALQQKPVTPAPQPKIQS
PPPKPIVTSPPPNMANKNQNQNQNQNQNQQLKSPVGNANGQQHKQQQQQQLPHPSPKTGP
PQGQKSGPQQGQRTGPPLIKKERMESEKNASNAEAAEPQEGFKATLSMLLKPGEKTYTQR
CRLFIGNLPSDISEEQFKKLFAKYGEPSEVFINKGKGFGFIRLESRALAEIAKAELDDTP
MRGRLLRVRFATHSAALSVKNLSPFVSNELLEEAFSQFGMVERSIVIVDDRGRSTGKGIV
EFASKPAARKALDRCNEGVFLLTTSPRPVIVEPLEQFDDEDGLPEKLAQKNPRYNAEREE
PPRFARPGTFEFEYSKRWKSLDEMEKQQRQQVEKNMREAREKLESEMEDAYHEHQANLLR
QDLLRRQEELRRMEELHSQEMQKRKEMQIRQEEERRRREEEMLRKREMEEQMRRQREENY
RMGNFIDREREMRMNPGGALGMGAGQKFPMGGMGFEGQQGMGQSPGGLMGNEMRNERFAQ
GGPRGMGPGNPNYGRVREEFDGPPKKPRF
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgatttaataacaatcgcggcggactcggggggatgaatcacttccaggcgcgc
agaggcgggcccggcggccccatgcgagggggactaatggggaacccgaacttcaggagc
catccctttcaaaaccagaaccagaatcggagaggacagaacaacagcttcaacaaaccg
aacaatcaggggccgcaggtgactccccagaagccacagcaactgcccatcatccctcca
ccgacccccggcccggcgctcacgatgaaaggcccgatgcagcagcagaacgcggcggcg
gcggcagcggcgctgcaacaaaagccggtaactcctgcgccccagccgaagattcagtcc
ccaccgccgaaacctatcgtgacctcccctccacccaatatggcaaacaagaaccagaac
cagaaccagaatcagaatcagaaccagcagctgaagtcgccggtcggaaatgccaacgga
caacagcacaagcagcagcagcagcagcagctcccacacccgagcccgaagaccgggccc
ccgcagggccagaagtcaggcccccaacaaggccagaggacggggccaccgttgatcaag
aaggagcgaatggagtcggagaagaatgcttcaaacgcggaggcagcagagccacaggag
ggattcaaagcgacactgtccatgctgctgaaacccggcgagaagacgtacacacagcgg
tgccgcctgttcatcggtaacctgcccagcgacatctcagaggagcagttcaagaagctg
ttcgcgaagtacggagaacccagcgaggtcttcatcaacaaaggcaaaggctttggtttc
atccgactggagtcccgtgcacttgcggagatagcaaaggcagagttggacgacacgccg
atgagaggcaggctcctgcgcgtgcgattcgccacacactccgctgctctgtcggtgaag
aatctgtcgccgtttgtctccaacgagctcctggaagaagctttctcccagttcggaatg
gtggagaggtccatcgtcattgtggacgatcgtgggcgctccacgggcaagggcattgtc
gagttcgcctccaaacccgcagcgaggaaggctctggaccggtgcaacgaaggcgtcttc
cttctcactacgtcaccccgacctgttattgttgagcctctggagcagtttgacgacgaa
gacggacttccagagaaattggcacagaagaatcccagatataatgcagagcgtgaggaa
cctccccgctttgctcggcctggcacttttgaatttgagtactcaaagcgatggaagtcg
ctcgacgaaatggagaagcagcagcggcagcaggtggagaagaacatgcgcgaggcccga
gagaagctcgagagcgagatggaggatgcttaccacgagcaccaggccaatctactcaga
caagatctgctgaggcgacaggaagaacttcgacgcatggaagagctgcacagtcaggaa
atgcaaaagaggaaggaaatgcagatcagacaagaggaagaacgacgccggcgtgaagag
gagatgcttcgtaaaagggagatggaagaacagatgcggcgtcagcgtgaggagaactac
aggatgggcaatttcattgatagggaacgggaaatgagaatgaatcctggtggcgctttg
ggcatgggtgccggccagaagttccccatgggtggaatgggctttgagggacagcaggga
atgggacagtccccaggaggcctgatgggcaacgaaatgcgcaatgagcgctttgcccag
ggcggtcctagggggatgggtcccggtaaccccaattacggcagggtccgcgaggagttt
gacggtccccctaagaaaccccgtttttaa
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