KEGG   Scophthalmus maximus (turbot): 118292474
Entry
118292474         CDS       T09850                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smau03400]
    118292474 (per1b)
DNA repair and recombination proteins [BR:smau03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    118292474 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 118292474
NCBI-ProteinID: XP_035477356
UniProt: A0A2U9B126
LinkDB
Position
12:complement(4701259..4715773)
AA seq 1428 aa
MSYDNSKSMPSSSSTRGRVSRADGNDNDQEAESEGLNSPETIGSHSSANVATLEQGRGAG
GDSSPSGGSGSGGSSRDQRGPNSDDMDGLSSGNDSGERESERGNGSRGRQSIRSSHSSSN
GKDSGMMLETTESNKSSNSQSLSPPSSSVAYSLMSTNLEHDPPSTSGCSSNQSARIQTQK
ELMKAIKELKLRLPSERKAKGHSSTLNALKYALQCVRQVRANREYYHQWSVEECHGCSLD
LSAFTIEELDNITSEYTLKNTDTFTMAVSFLTGKVVYVSPQGSSLLRCKPEFLQGIMFSE
LLAPQDVSTFYSGTAPCRLPSWASCIGSAPPPVDCTQEKSMFCRIRADRAHGGEMRYYPF
RLTPYQLTLRDFDAAEPQPCCLLIAERVHSGYEAPRIPADKRIFTTSHTPSCLFQEVDER
AVPLLGYLPQDLVGTPTLLYIHPEDRPMMVAIHEKIFQSAGQPFDYSPMRMCARSGEYLT
IDTSWSSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTMPQGCEDRVTTPDIVQLSERIHRV
LVQPVHSGSSQGYCSLGSSGSRGSRRSHQQHLSASAGSSSDSNGPAMDVAATAAVALHKP
MTFQQICKDVHMVKTNGQQVFIESRNRPVPRKNISAGTTSIRAISSDPIRGLIADLTKPL
KALVPAPLVQKEPPPGYSYQQINCLDSIIRYLEGCNIPNTVKRKCGSYTTSSTSDDDKQQ
ETINNSRGGSVSLVGEPPTLPPLTMATKAESVASVTSQCSFSSTIVHVGDKKPPESDIVM
EDAPTTHTLAAPLTTAATAPPPPPPPPTPPLPPFPQATQPERDSRRCGSVGGGRLGLTKE
VLSAHTQQEEQAFLDHFKDLSKLRVFDQTASSTVRCNTPTANPLSRGVRCSRDYPAAGSS
NGHRRGRGGKRLKHQESSDQHSSLGMNGSRQDLRTSTAPMPLNMPLAPPTNSSSWPSVHS
QASMPAAPFAPGMLPLYPVYPPLAQPLPIPPTQMVPPMMALVLPPYMFPQMGAPLPQPGA
TPGHFYNPNFAYPGATPAVHAAIHPAAIPAAVPSIVSHPMPIPGNCAPSRSSTPHSYSQM
PADREGAESPLFQSRCSSPLNLLQLEETPCNRLEVATALAASQQAAPSVQGSAAGGPSSA
TQRSSDDTSKENENGETNESNNDAMSTSSDLLDLLLQEDSRSGTGSAGSGSGFSGTRSSG
SGSGSNGCTSGTSSSQGSHTSKYFGSIDSSENDHSRKQPAGGSSSTGGEEQFIKCVLQDP
IWLLMANTDDKVMMTYQLPVRDMETVLREDREALRSMQKHQPRFTEEQKRELSQVHPWIR
TGRLPRAINISGCTDCKSPPTVPPAAPFDVEIHEMELCSVLKAQEEGAKKNLSETAMDET
HAEDEDDEGEEKDTKTQDSNHDMTAEEPRVSSAAVEAKAQSAESDMTQ
NT seq 4287 nt   +upstreamnt  +downstreamnt
atgagttatgacaactctaaatcaatgcccagcagcagcagcactcgggggcgagtgtca
agggccgacgggaatgacaatgaccaggaggcagagtcagaagggctgaactcaccagaa
accatcggtagtcattccagtgccaatgtcgccaccctggagcagggacgcggagccggg
ggagactcgtctcccagcggagggtcgggttctggaggctcatccagagaccaaaggggg
cccaactctgatgatatggacggcctctccagcgggaacgactccggggagcgggaaagc
gagagggggaacgggtcacgcgggcgccagtccatacgcagctcccacagctcttcgaac
ggcaaggactctggcatgatgctggaaaccacagagagcaacaagagctccaactcccag
agcctctcacctcccagcagctccgtggcctacagcctgatgtcaaccaacttggagcac
gaccctccctccacctccgggtgtagcagcaaccagtcagcgaggatccagacccagaaa
gagctcatgaaggctatcaaggagctgaagctccgcctgccgtctgagcgcaaggccaag
ggacactccagcacactcaatgcactcaaatacgcacttcagtgtgtcagacaagtcaga
gctaaccgggagtactaccaccagtggagtgtggaggagtgtcacggctgcagtctggac
ctgtcagccttcacaatcgaggagcttgataacatcacctcggagtacaccctcaaaaac
actgacacgttcaccatggccgtgtctttcttgacagggaaggtcgtgtacgtatcaccc
cagggctcgtccctgctgcgctgtaagcccgagtttctccaggggattatgttttcggag
cttttggccccgcaggatgtcagtactttctacagcggcacagcaccctgccgccttcct
tcctgggcctcctgcatcggatctgcacctcctccagtcgattgcactcaagagaagtcc
atgttctgtcggatccgagctgaccgggcacacggtggcgagatgcgctactacccattc
cgcctcacgccataccagctcactcttagggactttgatgccgcagagccacagccctgc
tgcctgctcatcgcagagagggtccactctggatatgaggctcctcgtatcccagcagac
aagaggatcttcaccaccagtcacactcccagctgcctcttccaggaggtggatgagagg
gcggtgccattgttgggctacctgcctcaggacttggtgggaacccccaccctgctctac
atccaccccgaggacaggcccatgatggtggccatacatgagaagatctttcagtctgcc
gggcagccgtttgactattcccccatgaggatgtgtgcccgcagcggggagtatctgacc
attgacaccagctggtcgtcctttgtcaacccctggagccgcaaggtggccttcatcgta
gggcgccacaaagtcagaacgagccctctgaatgaagacgtgttcactatgccgcaaggc
tgcgaggaccgcgtcaccacgcccgacatcgtccagctgagcgagcggatccaccgggtc
ctggtgcagccagtgcacagcggcagctcccagggatactgctcccttgggtccagtggg
tcgcggggctcccgccggtctcaccaacagcaccttagtgcatcggccggctcgtccagc
gacagcaacggccccgccatggacgtggctgccactgccgccgtcgctttacacaaaccc
atgacgttccagcagatctgcaaagacgttcacatggtcaagacgaacgggcagcaggtt
ttcatcgagtcccgcaaccgtccggtgcccagaaaaaacatcagcgcaggcacaacaagc
atcagagcgatcagcagtgacccaatcagaggtttgatagcagacttgaccaaaccgctt
aaagctttggtccctgctcctcttgtacagaaggagccgccgcccggctactcctaccag
cagatcaactgtctggacagcatcatacggtacttggagggttgcaacattcccaacacg
gtgaaaaggaagtgtggctcctacacgacctcctccacgtctgatgacgacaaacagcag
gagaccatcaataatagcagaggtggttcagttagcctcgtaggtgaaccacctactctg
ccccccttgaccatggccacaaaggcagagagtgtagcctcagtcacgtcccagtgtagc
ttcagcagcaccatcgtgcatgtgggagacaagaagcctcccgagtcagacatcgtcatg
gaagacgctcctacaactcacactctggccgctcctctgactactgctgccacagcgccg
ccgcctcctcctcccccaccaacccctcccctgcctcccttcccacaagccactcagccg
gaaagggacagcaggaggtgcggaagtgtcggaggaggtcggctgggtctgaccaaagag
gtgctctccgcccacacccagcaggaggagcaggcgttccttgaccacttcaaggacctc
agcaagctgcgtgtgttcgatcagacggcgtcttcgaccgtgcgatgcaacaccccaact
gccaaccctctgtcacgaggagttcgctgttcccgtgactaccccgctgcaggaagcagc
aatggtcacaggcggggccgtggaggaaagagactcaagcaccaggagtcttcagaccaa
cacagctccctgggaatgaacgggagccgccaagacctcaggaccagcaccgccccaatg
cccctcaacatgcctctggcacccccgacaaactcctcatcctggccctccgttcactct
caggccagcatgcccgccgcccctttcgctcccggtatgcttccactctaccccgtttac
ccaccgctcgcgcagcccttaccaatcccccctacccagatggttcctcccatgatggcc
ctcgttctgcccccatacatgttcccccagatgggagcacccctccctcagccgggtgcc
acccctggacacttctacaacccgaactttgcgtaccccggtgctaccccagctgttcac
gcagccattcacccggccgccatcccggccgccgtcccctctattgtctctcacccgatg
cccattcccggcaactgcgccccgtctcgtagcagcaccccacactcttacagccagatg
cccgctgaccgggagggggcagagtcccccctcttccagtcccgatgctcctccccactc
aacttgttgcagctggaggagacgccatgtaaccgtctagaggttgccacggcgctggcg
gcatcacagcaggccgcgccttctgtgcagggcagtgcagccgggggcccgagctccgcc
actcagaggagctctgatgatacgtccaaggagaacgagaatggtgaaacgaacgagtca
aacaacgacgccatgtccacctccagcgacctgctggacctgctgctgcaggaggactcc
cgctcaggcaccggctcagctggctctggttcaggtttctcgggaacgaggtcctcgggt
tccggctccggctcaaacggttgcaccagtggcaccagcagcagtcagggcagccacacc
agcaagtactttggcagcatcgactcatcagagaacgaccactcccgcaaacagccagca
gggggcagcagcagcactgggggcgaggagcagttcatcaagtgtgtcctccaggaccca
atctggctactcatggccaacaccgacgacaaggtcatgatgacctatcagctgcctgtc
agggacatggagacggtgctgcgcgaggaccgcgaggccttgaggagcatgcagaaacac
cagccacgcttcaccgaggagcagaagagggagctgagccaggttcacccctggatccgc
acaggacgcctgccgcgagccatcaacatctctggctgcacggactgcaagtcccccccc
actgtgccaccggccgccccgttcgacgtggagatccacgagatggagctgtgcagtgtg
ctgaaggctcaggaggagggcgccaagaagaatctctccgaaacggccatggacgaaact
cacgcagaggatgaagacgacgagggggaggagaaagacaccaaaacgcaagacagcaac
cacgacatgacggcagaggagccgagagtgtcctcagccgctgtggaggcgaaggctcag
tcggccgagtctgacatgactcagtag

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