Scophthalmus maximus (turbot): 118292601
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Entry
118292601 CDS
T09850
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118292601 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
smau04030
]
118292601 (smo)
G protein-coupled receptors [BR:
smau04030
]
Frizzled / Smoothened family
118292601 (smo)
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GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
118292601
NCBI-ProteinID:
XP_035477454
UniProt:
A0A2U9B2R1
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Position
12:18333588..18342139
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AA seq
823 aa
AA seq
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MSSHGRGPIVGLCWMLCVAAALLAGSAAAMSPNGTVLEEHCRKTTTCEALKYNTCLGSPL
PYTHTSLMLAEDSSTQEEAFEKLAMWSGLRNAPRCWSVIQPLLCGIYMPKCENGRVELPS
QTLCLSTRRPCSIVDQERGWPGFLKCDKFPVGCSNEMQKLKFNTSGQCEAPLVKTDIQSS
WYKDVEGCGIQCDNPLFTEAEHNDMHVYIAYFGTITLLCTFFTLATFLADWKNSNRYPAV
ILFYINACFFVGSIGWLAQFLDGARKEIVCKSDNTMRLGEPSSSETLSCVTIFIIVYYSL
MSGVIWFVMLTYAWHTSFKALGTTQQPLSGRTSYFHMVTWSVPFVLTVAILAIAEVDGDS
VSGICFVGYKNYRYRAGFVLAPIGVVLLVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKI
NETMLRLGIFGFLAFGFVLITFGCHFYDFFNQAEWERSFREYVLCEANVTIASQTNQPIP
ECTIKNRPSLMVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCRIIGRSDDEPKRIKK
SKMIAKAFAMRKELHKDPEKELSFSMHTVSHDGPVAGINFEINEPSNDMSSAWAQHVTKM
VARRGAILPQDISVTPTGTPVPPPDERNRLWMVEAEISPEMIKRKKKKKKRKKEVRPAKE
VVDNQAYHQREFGRSSVPRLPKLPCHPSLVANLQEQQKLEEEVLPGACPDYQTSHPLSCE
ERCPYLPYQSSRNSYGRSLLSNHLALNDLPEDLGLGPRCPPSASTWQPSGSSHFPREMDR
TDGLSDRLAHVARVPVGRRAGYGPIHSRTNLMEAELMDADSDF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccacggccggggccccattgttggattgtgctggatgctgtgcgtcgcggct
gccttgctcgcgggctccgcggcagcgatgtctcccaacgggaccgtgctcgaggagcac
tgccggaaaacgacgacctgcgaggctctgaagtacaacacatgcctggggtcgcctttg
ccctacacgcacacttctctgatgctggcggaggactccagcacccaggaggaggctttc
gagaagttggccatgtggtctggtttgaggaacgctccgcgctgttggtcggtcatccag
ccgctgctctgcggcatctacatgcccaaatgtgagaacggtcgggtggagctgcccagc
cagaccctgtgtctgtccacgcgtcggccgtgcagcatcgtggaccaggagagaggctgg
cccggcttcctcaagtgtgacaagttccccgtgggatgttcgaacgagatgcagaagctg
aagttcaacacgtcgggccagtgtgaagctccgctggtgaagacggacattcagtcgagt
tggtacaaggacgtggagggctgcggcatccagtgcgacaaccccctgttcaccgaggcg
gagcacaatgacatgcacgtctacatcgcttacttcggcaccatcaccctcctctgcacc
ttcttcactctggccacttttcttgctgactggaaaaactccaaccgctacccagctgtc
atcctcttctacatcaacgcctgtttcttcgtgggcagtatcggctggctggcccagttc
ctggatggggcacgcaaggagattgtgtgcaagagcgacaacaccatgcgcctcggggag
ccatcgtcttcggagacactgtcgtgcgtcaccatcttcatcatcgtctactactccctg
atgtccggtgtgatctggttcgtcatgctgacctacgcctggcacacgtccttcaaagct
ctgggcaccacccagcagccgctgtccggcaggacctcctacttccacatggtcacctgg
tccgtccccttcgtcctcactgtggccatcctggctatcgctgaggtggacggagactcg
gtgagtgggatctgtttcgtgggctacaaaaactacagataccgtgctggctttgtgctg
gcgcccattggcgtcgtgcttcttgtcggtggctacttcctcattcggggtgtcatgacc
ttgttttccatcaagagtaaccaccccggactgctgagtgagaaagcggcgagcaaaatc
aacgagacgatgctgagacttggcatatttggtttcctcgctttcggctttgtgctgatc
acattcggttgccacttctacgacttcttcaaccaggctgagtgggagaggagcttcaga
gaatatgtgctgtgcgaagccaatgtgacaatcgcctctcagaccaaccagccaatccct
gaatgcaccatcaagaaccgaccgagcctcatggtggagaaaataaacctgttctccatg
ttcgggacgggcatcgccatgagcacctgggtctggaccaaagccaccatcctcatctgg
aaacgcacctggtgcaggatcattggtcgtagcgacgacgaacccaagaggatcaagaag
agcaagatgatcgccaaggcattcgccatgaggaaagagctccacaaggacccggagaag
gaactgtctttcagcatgcacaccgtgtcacatgacgggccagtggctggaatcaatttt
gaaataaacgaaccatccaacgacatgtcatcagcttgggcgcagcatgtgactaagatg
gtggcccggcgaggtgccatcctgccgcaggacatttctgttacccctactggtacacca
gtgccacctccggacgagaggaatagactgtggatggtggaggctgagatttcaccagag
atgataaagaggaaaaagaagaaaaagaagaggaagaaggaggtgcgtccagcgaaggag
gtagtggacaaccaggcttatcaccagcgtgagtttggccgcagctcggtgcctcgtctg
cccaaactgccctgccacccgagcctggtcgccaacctgcaggaacagcagaagctggag
gaggaagtcctgccgggggcctgcccagactaccaaacctcacaccccctgtcctgtgag
gagagatgcccctacctgccctaccagagtagtcggaacagctacggccgcagcctgctc
tctaatcatctggccctcaatgatcttccagaggatctgggtcttggcccccgctgcccc
ccctcagcttccacctggcagccaagtggatcttctcacttcccccgtgagatggatcgc
accgacgggctctcggacaggttggcccatgtggctcgggtaccagtaggccggagggcc
ggctacgggcccatccactcccggaccaatttgatggaggcggagcttatggatgctgac
tctgacttctag
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