Scophthalmus maximus (turbot): 118292774
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Entry
118292774 CDS
T09850
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118292774 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118292774 (dcp1b)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118292774 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
118292774 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
118292774
NCBI-ProteinID:
XP_047192524
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All DBs
Position
12:complement(18141013..18153727)
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AA seq
678 aa
AA seq
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MMTATSAGGAHCLPATGLDISLAALQRQDPYINDIVDVASQVALYTYNNRANEWEKTEVE
GTLFIYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQDPFLLYRNARLVIHGIWFYD
KEDCQRVAQRMKLLTQQEQVLAQSQGGWLSPAGGGGVVVVGGGGGGGGGGGGIFVGGGGG
GGGKAVDIIQMLTKARTAYDKEKSTSEPKEIGGSSVLFGNPNLIKPIPVKPNTQDSEGAE
PKSLSLATLFGPQHHPSPKSDPVSPVALPVAGSATGKFARPPVARTLIYDDTVNSGRGVT
SKGGNAVVIGDGGNIVAGLLQGPVTHQQQQQQHQQQNQPQHCPAIQKLMQGQRGVLQPLS
ESPENRLCDNGVPLEHHHHHHLFPHHHQQHHHHHHHQQQQLQPDPIKRLFQTQPPPPSFP
SAAPPCCSIPPPLQQHPHLFSQPIMVDSGSCSHLQAQQSQHLFFSLSKPQPEVQHNSHSA
STLQGAGFFPSQVTSDQVFQASQGLSSQMPGVVSPHELLQKLQLVQQEQSLASNDPPRPS
PGLAPRFLGPTHQSQSTDLVVAPVPNQIAATAGQKAALQFQVTSPQRIPATVAPNLLLSP
SVFTQAKSSGGLSAVALENCPVPSTLPRAPPQEEVRVLSRGQLQTTLLHLIQGDSSFLDT
IYEAYISCFAHDSRTKYQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagcgacttctgcgggtggcgcccactgcctccccgccacgggactggatata
agtctggctgctctgcagcggcaagacccatacatcaacgacatcgtggacgtggccagc
caggtcgccctgtacacgtacaacaacagggcgaacgagtgggagaagaccgaggtggaa
gggactcttttcatctacacaaggctggcatctcccaggcatggtttcaccataatgaat
agactcagcatggagaacttgacagagccaatcacaaaagacctggacttccagctccag
gaccccttcctgctgtaccgcaacgcacgactggttatccatgggatttggttctatgat
aaggaggattgtcaacgcgttgcccagaggatgaagctactgacccagcaggaacaggtc
ctggctcaatctcagggcggttggttgtcccctgcaggaggaggaggagttgttgttgtt
ggaggaggaggaggaggaggaggaggaggaggaggaatttttgttggaggtggtggtggt
ggaggtgggaaagcagtagacatcatccagatgttgaccaaagcacgcaccgcgtatgac
aaggagaagtctacttccgagccaaaggagatcggtggcagcagtgttctatttggaaac
cccaacctgatcaaaccaatacctgttaaaccaaacactcaggatagtgaaggtgctgaa
cccaagtctctctctctggccactctcttcggaccgcaacatcacccctcacccaaatcg
gacccggtctctcccgtggctctgcctgtggcggggtcagcaacagggaaattcgctcgc
ccacctgtagcccgcacgctgatctatgatgatacagtgaactctggccgaggtgtgacc
tccaaaggaggtaacgccgtagtcattggagacggtggaaatattgttgcgggcttgttg
cagggtcccgttactcaccagcagcagcagcagcagcaccagcagcagaaccagccgcag
cactgcccagccatccagaagctcatgcaggggcagaggggggtgcttcagcccctgtct
gagtcccctgagaacaggctgtgcgacaacggggtgccactggagcatcaccaccatcat
catctgttccctcatcatcatcaacagcaccatcatcatcaccaccaccaacagcaacag
cttcaacccgacccaatcaagagacttttccaaacccagccacctcctccctccttcccc
tctgctgctcccccttgttgctccatcccccctcctctgcagcagcacccccacctcttt
tctcagcccatcatggtggattctgggtcatgttcccaccttcaagcgcagcaaagccag
cacctgtttttcagtctttctaagcctcaaccagaagttcagcacaacagccactcagct
tcaactctccagggagcaggtttttttccatctcaggtgaccagtgaccaagtctttcaa
gcttcacaaggcctgtcttcccagatgcctggcgtggtgtctccccacgagctcctccag
aagctccagttggttcaacaggaacaaagcctggcttccaacgaccctcctcgacccagt
ccaggactggcccctcggttcctggggcccactcatcagagtcaaagtacagacttggtg
gtagctccggtcccaaatcagattgcagccactgcaggtcaaaaggctgcactgcagttt
caggtcacctccccccagcgaataccagccactgtggccccaaacctgctcctctctccc
agtgtgttcactcaggcaaagtctagtggcgggttgtcagcagttgccctggagaactgc
cccgtaccctcaaccctgcccagagcccctccacaggaggaggtcagagttctgtcccga
ggccagctccaaaccacactgctgcatctgatccagggtgacagctcgttcctggacacc
atctacgaagcctacatcagctgctttgctcacgactccaggaccaagtaccagtga
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