Scophthalmus maximus (turbot): 118294701
Help
Entry
118294701 CDS
T09850
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118294701
03041 Spliceosome [BR:
smau03041
]
118294701
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118294701
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
118294701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118294701
NCBI-ProteinID:
XP_035477559
LinkDB
All DBs
Position
11:complement(8300038..8321206)
Genome browser
AA seq
763 aa
AA seq
DB search
MEAVTAFNMELFSMIEMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVFAPRFLKNFTETFQNLYRCPEGDKTKIVRVLNLWQKN
GVFDMDIIQPLMDMADEAIVPPAALEVPSNPQPEIQPPITGASAVQAVPQLPSPDALAAV
AQLFQSPHGQELQRMLQNFQQADKTLAATITNNIPNPPPMSVTQLNPYSAHTEKKSSLAE
KLLDRFDYDDEPEDMTPKELGAQPQYTPEKVFNQFPGQMPNTENVYPHMMGQTDGTEQRG
GAMSHGEHHLMPDGYHSIDEAYSQLRRNSREDSNMRREGRHRGFGRRSRSRSGSRSPKRR
RSRSSSRSRKSRHRGSHSRSREQRWRSRSRSQDRNEREKDRERRQKGLPSIKSQTLNVCT
TTLWVGQLDKKTQQSDVMSLLEEFGQIDSINMIPPRGCAYIVMVHRQDAYTALNKLSRGS
YKVNQKPVKIAWALNKGIKSAHKKFWDVERGVTYIPWSKVKVEELESYREGGMLDTETLN
PEWNHAKDLNRQPAINGALESVPGDGMVTARIQVPAVQQVTPIGSPPAFPGPIMLSPTAM
PLGGGPFIPAEFDPTNLPPAGNVKPPEDSTRESKRDKGTPSDAGSDNHLGSPVAPGMTMP
GPAVMHGPGSGRPPLQHPPGMPNPHLPPFLSPPNMPHMPPQMMPGGPMFPPERFRMPMPF
APRGPPFHQHSSMGPEGMDDREGRHFRNGRPGFGCSPFQRGRW
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgaccgcgttcaacatggagttgttctccatgattgaaatgaagcctcca
atatcccgcgctaaaatgatgtctgtaacaaaatcggccatcaaggctatcaagctttac
aaacatgttgtccagattgttgaaaagttcatcaagaagtgcaagccagaattaaaagtc
cctggtttgtatgtggttgactccattgttcggcagtcacgccatcagtttggtgttgac
aaggatgtatttgcgccaagattcttgaagaacttcacggaaaccttccagaatctgtac
cgctgcccagagggggataagaccaaaattgtccgagtcctgaacctgtggcagaagaat
ggtgtgttcgacatggacatcattcagcctctgatggatatggctgatgaagcaattgta
cctcctgctgcactagaagttccttctaacccccaaccagagatacagcctcctatcact
ggtgcctctgctgtgcaggctgtgcctcagcttcccagtcctgatgccttagctgctgtg
gcacagctgtttcagtccccccatggtcaggagctgcagaggatgctccagaacttccag
caggcagataagaccctggcagccaccatcacaaacaacataccaaacccaccccctatg
tctgtgacccagcttaacccatacagtgcacatacagaaaagaaaagttccttagctgag
aaactccttgatcgttttgactatgatgatgaacctgaagatatgacacctaaagaactg
ggtgcccagccacaatacacacctgaaaaggtctttaaccagtttcctggtcagatgccc
aacacagagaatgtttatccacatatgatgggacagaccgatggtacagagcagcgcggt
ggagcaatgagtcacggtgaacatcatttgatgccagatggataccattccatagatgag
gcttattcacaattgcggagaaattcaagagaagactcaaatatgaggcgggagggcaga
cacagaggcttcggcaggagatccagatccagatctggttccagatctcccaaaagaaga
agatcgagatcttcgtcccgctcaagaaagtcaaggcatagaggatctcattctcgctcc
agagaacaacgctggagatctcgctctcgttctcaggacaggaatgaaagagagaaggac
agagagcgccgacagaaaggtcttcccagcataaagagccagacactcaacgtttgcacc
accacgctttgggttggacaactagacaagaaaacccagcagtctgatgtgatgtccctt
ttggaagagtttggccaaattgactccatcaatatgattcctccgaggggttgtgcctat
attgttatggttcacagacaagatgcctatacagctttgaacaagctcagcagggggtca
tacaaggtcaatcagaagccagttaagattgcttgggctttgaacaaaggtataaaatcg
gcacacaaaaagttctgggatgttgagcgtggagtaacatacattccttggagcaaagtc
aaagttgaagagctggagagctatcgagaagggggtatgctggacacagagacactaaat
ccagagtggaatcatgccaaggacctcaacaggcagccggctataaatggagcattggag
agtgtaccaggagatggaatggtcactgctcgcattcaggtgcctgcggttcaacaggta
acacctattggaagtccgcctgcttttcctggccccatcatgctgtcccccacggccatg
cctctaggaggaggcccgttcatccccgctgaatttgacccgacgaacttgccaccagca
ggaaatgtaaaacctcccgaggactccaccagggaatctaaaagagacaagggcacaccc
tccgatgcaggcagtgacaaccacctgggctcacctgtggcaccggggatgaccatgccg
ggcccagcagtcatgcacgggcccggatcaggcaggccacctctgcagcatcctcctggc
atgccaaatccccatctaccaccgttcctctcgcctccaaacatgccacacatgcccccg
caaatgatgccaggaggacccatgtttcctccagagaggttcagaatgcccatgcccttc
gctcctcgaggccctcctttccatcaacattcttccatgggaccagagggcatggatgac
agggaagggaggcatttcagaaatgggaggccgggatttgggtgttcacctttccaaaga
gggaggtggtag
DBGET
integrated database retrieval system
