Scophthalmus maximus (turbot): 118299062
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Entry
118299062 CDS
T09850
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118299062
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smau01007
]
118299062
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smau03016
]
118299062
Enzymes [BR:
smau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
118299062
Amino acid related enzymes [BR:
smau01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
118299062
Transfer RNA biogenesis [BR:
smau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118299062
Prokaryotic type
118299062
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
118299062
NCBI-ProteinID:
XP_035478382
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Position
1:12862447..12891072
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AA seq
694 aa
AA seq
DB search
MGVTQMLQLLVCRPAARASFRAHRRYSKLRATPILSERLHVFESLREKRGSETRVDASEK
PLSIRLADGRTVKGKAGVTTPLFVAQSVRVKGALVSKVNGELWELGQPLEADCELQLLGF
DTVEGKQAAWRTAACVLGGVLEGVFGAKVCREGASELGFYSDHLLDNGALSLSDVEDRCK
DAAALRLPLSTLELNVEEVRELFQSCKLRLQLVDEEMNGSPVTVYRCGDSVGVCAGPLLP
HTGLLKFFKLLQLSPVTLANQTESSGLMRLSGVAFPGEKDKDEWEREQEEARRRDHRRIG
TDQELFFFNDVSPGSCFFLPKGAHIYNRLTDFIKSEYQRRGFTEVVTPTLYSTALWERSG
HWEHYSENMFTVTSEGSQTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELS
GTLGGLTRVRRFCQDDAHIFCTPEQLEEEIVSCLDFVRSVYRVFGFSFHCLLSTRPTPCL
GEPEQWDSAEQQLERSLQHFGERWELNAGDGAFYGPKIDIQIRDAIGRQHQCATVQLDFQ
LPIRFDLQYVGQDGQLHRPVMIHRAVLGSLERMIAILAENFGGKWPLWLSPAQVMVVPVG
GNSESYAKQVVRQFRDAGFMADLSDDQGATLNKKIRSAQLAQYNYILVVGDKERESGTVN
VRSRQGKQLGRRPTDDVLTSLTLLRDTRSNLDEF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggggtaactcagatgttgcagctgcttgtctgtcggccggctgctcgtgcgtcattt
cgcgcgcacaggaggtacagcaagctgcgggcaaccccgattttatctgagcggcttcat
gtctttgagtcgcttagggagaaacgaggcagtgagacgagagtagacgcttcggagaag
cccctcagcatccgtctggctgatggccggacggtgaaaggaaaggctggcgtcaccacg
cctctctttgtggcccagagtgtccgggtgaagggagccttggtgagtaaggtgaatggg
gagctgtgggagcttggacagcccctagaggcagactgtgaactacaacttctagggttc
gacacagtagaaggaaaacaggcagcatggaggacagcagcgtgtgtcctcggtggggtg
ttggagggggtgtttggtgccaaggtttgcagagaaggagcgtcagagctcgggttttac
tctgaccatctgctagataacggagccttgtctctaagcgatgtagaggacagatgtaag
gatgctgcagccctcagacttcctctgtccacactggagctgaatgtagaagaggtgcga
gagctcttccagagctgtaagttgagactgcagcttgttgatgaggagatgaatggctcc
cctgtcacagtatacaggtgtggagacagcgtaggggtctgcgcgggccccctcctccca
cacaccggcctcctcaagttcttcaagttgctccagctgtcgcctgtgacattggccaat
cagacggagtcttcaggtttgatgcgtctgtcgggtgtcgcctttccgggagagaaggac
aaagatgaatgggagagggagcaggaggaggcgaggaggagggaccacaggcgcatcggg
acagaccaggagctgttcttcttcaatgacgtcagtccaggcagttgcttcttcctgcct
aaaggagcccacatctacaacagactcactgacttcattaagagtgaataccaaaggcga
ggcttcaccgaggtcgtgaccccaactctgtacagcactgcattatgggagcgctcaggc
cattgggagcattacagcgagaacatgttcactgtgacgtcggagggatctcaaacctac
gctctcaaacccatgaactgccctgcacactgtcttatgtttgagcaacgagttcgctcg
tggagggagcttcctctgcgctgggctgatttcggggccctgcatcgtaatgagctctcc
ggcactctgggaggtctcacacgtgttcgccggttctgccaggacgatgctcacatcttc
tgcacacctgagcagctggaagaagagattgtgtcttgtttggactttgtgaggagtgtg
tatcgagtgtttgggttttctttccactgcctcctgtctacacgtcctacaccgtgcctc
ggggagcctgagcagtgggacagtgctgagcagcagttggagaggagcctacagcacttt
ggtgaacgttgggaattgaacgcaggagatggagcgttctacggaccaaagattgacatt
cagatcagagacgccattggcagacaacaccagtgtgccacagtccagttggacttccag
ctgccaatcagatttgaccttcagtacgtcgggcaagatggacagctgcaccggcccgtg
atgatccacagagcggtgctggggtcgctggagaggatgattgctatactggctgaaaac
tttggcgggaaatggcccctgtggttgtctccggcacaggtcatggttgttcctgtgggg
ggcaacagtgagtcatacgccaagcaggtggtccggcagttccgtgacgccggcttcatg
gctgatttgagtgacgatcagggagcgaccttgaataagaagattcgctctgcacagctg
gctcagtacaactacatattagtggtcggagataaggagcgtgaaagtggaacagtgaat
gtgaggagcagacagggcaaacagcttgggaggaggccgacagacgatgtgctgacatcc
ctcacactgctgcgagacaccaggagcaaccttgacgagttctga
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