Scophthalmus maximus (turbot): 118299068
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Entry
118299068 CDS
T09850
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118299068 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118299068 (dhx36)
03012 Translation factors [BR:
smau03012
]
118299068 (dhx36)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118299068 (dhx36)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118299068 (dhx36)
Translation factors [BR:
smau03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118299068 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NB-ARC
NPHP3_N
PhoH
Motif
Other DBs
NCBI-GeneID:
118299068
NCBI-ProteinID:
XP_035478350
LinkDB
All DBs
Position
11:11916764..11936697
Genome browser
AA seq
1124 aa
AA seq
DB search
MSYGYGGGGGRRGGGGGGGGRGGRGHRDGSRERWDRGGDGGGGAGRGGRGHRDGSRERWG
RGGDGDGGGGGGGGRGSRGGGRGGRGSRGPGSDFDQGGGAGGAGGPRDGPPPHLKGREIG
MWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDHARPDRDRWEARPSTSDN
WQTDADRGGHSYFDGDLPEEKKQQIKSEEEEEEVSSGQKKAAHKSNRYFTPSVVKDELPD
NWDEEDPQEEEREKLRRTDKDLEFLFQDVVRDGSLDDDLMRDLQSKKSNPKYKEMLKFRE
KLPSYRKKEELVELINSNSVLVVSGETGCGKTTQVTQFILDDYINRGVGSMCRVVCTQPR
RISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSVLYCTTGIILQWLRSDTML
SSISHLVLDEIHERNLQSDVLLIIVKNLLALRDDLKVILMSATLNAEKFSKYFDNCPMIH
IPGSTFPVEEFLLEDIIELTRYRPQNQDCRPSWKRGFWQGQNSRPEKEEKEAEYKDSWPC
YERTLQDRYSDDTISAVEMLDSNDKIDLELILALIRHIVLQEEEGAILVFLPGWDNISGL
NDLLTAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIEDVV
YVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVRPGKCYHLYNGLRASLLD
AYQLPEIMRTPLEELCLQIKILKLGSIARFLEKALDPPTEKGISLAIKNLTDLNALDHSE
NLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMR
RKTLSRNSKSDHLTIVNAFQGWEEAKRRGARYEKEYCWDNFLSANTLQMLHNMKGQFAEH
LMRTGFVSSKDPRDPKSNVNSDNEKLIKAVIVAGLYPKVATIKPSHSKKRPGVKVYTQAD
GKVCIHPKSVNAEETEFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKDEG
QETIAVDKWIVFRSPARIAHLVKSLKKELDSLLEEKIRNPAPVDWENRQSKDCAVITAII
DLITTQEKPTGNTQGHGRPWASSSAQRGQHVYLNDDDNDDDDWK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatatggtggtggtggtggaagaagaggaggaggaggaggaggaggagga
agaggaggtcgagggcacagagacggaagcagagaaagatgggacagaggaggagatgga
ggaggaggagctggaagaggaggtcgagggcacagagacggaagcagagaaagatggggc
agaggaggagatggagatggaggaggaggaggaggaggtggaagaggctccagaggagga
ggaagaggtggaagaggctccagaggacccggttccgactttgaccagggcggtggagcc
ggtggagccggtggaccacgggacggtcctcctccgcacctgaagggccgggagattggg
atgtggtacgcgagatacggagccgtgaggaggaaacaggcggacaggagatcgcgggcg
gtggtccagatggacgaggccagagaacagcacattaccaagctgctgaattctgtccag
aatgaccacgctcgtccagacagagaccgctgggaagcaagaccctctacgtctgacaat
tggcagacggatgcagatagaggtggtcacagttactttgacggagatttgcccgaagag
aaaaagcaacagatcaaatctgaagaagaggaggaagaagttagttcgggccagaagaaa
gcagctcacaaatcaaatcgttacttcactccatcagttgttaaagatgaactgccagac
aattgggatgaagaggatccgcaggaggaggagagagagaaactgagacgcacagacaag
gatctagagtttttattccaggatgtagttagagatggttcactggacgatgacttgatg
agagatctgcagagcaagaaatcaaatcccaagtacaaagaaatgctgaaattcagggaa
aaactaccatcttatcggaaaaaagaggagctggtggaactgatcaactccaacagtgtc
ctggttgtgagtggggagaccgggtgtggaaagaccactcaggtcacccaattcatcctg
gacgactacatcaatagaggcgtgggctcgatgtgccgcgtggtgtgtacgcagccccgt
cgcatcagtgccatctcagtagcagagcgtgtagcagcagagagggcagaaagtgtcggg
aatggaaattcctgtggttaccaaattcgcctacagagccggttaccacggagacaaggt
tcggtcctgtactgtacaacaggaattattcttcagtggcttcgctcagacacaatgttg
tccagtatcagtcacctggtgttggacgagatccacgagaggaacctgcagtcggacgtt
ttgctcatcattgtgaagaacctacttgccctccgggacgatctcaaggtcatcctcatg
agtgccacgctcaatgcagagaagttttccaaatattttgacaactgtccaatgatccac
atccctggttcgactttcccagtggaagaattcctacttgaggacattatagagttgacc
aggtatcgtccccagaatcaggactgtcgtccctcatggaagagaggcttttggcaggga
cagaactccagacctgagaaggaggagaaagaggccgaatacaaagatagttggccttgt
tacgaacgcacactgcaggacagatactctgacgacaccatttcggctgtggagatgttg
gacagcaatgacaaaattgacctggagctgatcctggcactgatccgtcatattgtgctc
caagaggaggaaggagcaatcttggtgttcctccccggctgggacaacatcagcggcctc
aatgacctgctcacggctcagcaaatgttccgatcagatcggttcgtcatcatccccttg
cactccctcatgccgaccgtaaatcagacgcaggtgttcaaaaggcctcctcccggagtt
agaaagattgtgattgctaccaatatagccgagaccagcatcaccatagaggatgtcgta
tatgtgatagatgggggaaagattaaggagaccaactttgacaccaacaacaacatcagc
acgatgactgccgagtgggtcagccttgccaacgccaaacagaggaaaggacgcgctggc
agagtgcgcccagggaagtgctatcatctgtacaatggtctcagggcaagcctgttggac
gcctatcaattacccgaaattatgaggacacccctggaggagctctgcctgcagattaag
atattgaagcttgggtctatagctagattcctggagaaagccctggaccctcccactgaa
aagggcatcagtctagccatcaagaacctcacagacttgaatgccctggaccattcagag
aatctgacggcgctgggtttccacctggctcgtctgcctgtggagccacacattggcaaa
ctgatcctgtttggagctctgctgggctgcctcgaccccgtacttaccattgctgcttca
ctcagcttcaaagaccctttcttcatacccctggggaaagagaagatggccgacatgagg
agaaagaccctgtccagaaactccaagagtgaccacctcaccattgtcaatgccttccag
ggctgggaggaggcgaagcggcgtggcgcgaggtatgagaaggagtactgctgggacaac
ttcctgtcggccaatacactccagatgctgcacaacatgaagggtcagtttgccgaacat
ttaatgcgtacaggctttgtgagcagcaaggaccccagagacccaaaatctaatgtcaac
tcagacaatgagaagttaatcaaagcagtgatcgtcgcaggcctgtacccgaaggtggcc
acgatcaaaccgtctcacagcaaaaagaggccgggtgtcaaagtttacacccaggctgat
ggaaaggtgtgtatccacccgaaatctgtcaacgctgaagagacggagttcaactacaca
tggctcatctaccacctcaagatgagaacgagcagtatcttcctgtacgactgcaccgaa
gtgtccccgttctcactgctgtttttcggaggagacatcaccattcagaaggacgagggc
caagagaccatcgcggtggacaagtggattgtcttcagatccccagcacgcatcgctcac
cttgtcaagagtttaaagaaagagttggactctctgctggaggagaaaatccgtaacccg
gcgcctgtggactgggaaaaccgtcagtccaaagactgtgccgtcatcactgccatcatt
gatctcatcaccacccaggagaagcctacaggcaacactcaaggccatggcagaccgtgg
gcgtcgtcgtctgcccaaagaggccaacacgtttacctcaatgatgacgataatgacgac
gatgattggaagtag
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integrated database retrieval system
