Scophthalmus maximus (turbot): 118299069
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Entry
118299069 CDS
T09850
Name
(RefSeq) rho guanine nucleotide exchange factor 26
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau05100
Bacterial invasion of epithelial cells
smau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118299069
05100 Bacterial invasion of epithelial cells
118299069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118299069
Membrane trafficking [BR:
smau04131
]
Endocytosis
Macropinocytosis
Others
118299069
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118299069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SOS1_NGEF_PH
SH3_2
RHG20_PH
PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
118299069
NCBI-ProteinID:
XP_035478351
LinkDB
All DBs
Position
11:complement(11936981..11962618)
Genome browser
AA seq
1008 aa
AA seq
DB search
MDIGNDVDLSNNNNITPLWRRRTGKKKQDSSKPKPRPFSYHINGAATTDFPVEDNRCSLT
SGQPAEKLAAAPPCSGSNLVVLKHILHKPSRKSRVVRSISIGHLSSGLFSLSRFRSEDSR
SASLDNRVCNGDHDRGKSSNGETVWPEKRLLDSHVRLSSPFTLSTQKDEIAFGTSSPSPE
AFPVNCSSPVLSQCTPTTNNNNYNHHELSSLSSASSSSPPACRTPTPSHSSISSIPSLSS
LTSSDPPTPRSPSPADRGQALLKQSSPSPASSQDTRHASSSSSISSASASPSLSPSISPS
PSIILSTHSRAALKMGTQQLIPKGLASDVRQSKVPPSGQLGQGLAGLLGLDHSKRALKSL
SMVETGAYFSTSRDHSEGTEGESESPGTLRRGLRSTSYRRAVVSGVDLEVPGVDPKVHRL
SQPLIQGPELDKPASPVNPASPGNVNLTSPVTAKPARPRTPKLASPGTPKLTSPGFSKPS
SPGIEKPTSTGKNKNPDKKKVLTSQRTFDSEEEELYQNYQEKALHNDSDEDADSRDSAGD
RGIVVQYRPIRTSWSQLSVVKKSGLSDRMSQEDRKRQESIFEVISSEHSYLHSLEILIRM
FKNSAELSEAMTKTEHHHLFSNITDVCEASKRFFKELEERHQQNIVIDDVSDIVYKHAQS
NFDPYVTYCSNEVYQQRTLQRLVSKNPAFKEVLTRIEGHPDCRNLPMISFLILPMQRITR
LPLLMDTICQKTPKDSAPYEECKKALQAVSKVVRKCNEGARTMERTEMMYTINSQLEFKI
KPFPLVSSSRWMVKRGELKAFVEDNGIFLKRTSRQQVYFFLFNDVLIVTRKKSEESYTVI
DYALRDQIWVGSCQLEDLNLSPVRSTTGMLSSRQAGANHLFRLRFRSNHSGEKVPMILGT
ELLNERARWISALGQNVTNNKSRDRMHAMQMEVIRTYTAKQPDELSLQVADVVLVSQTVE
DGWCEGERLRDGERGWFLAECAEPITCQVTIERNMQRMDRLQGLETNV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggatattggcaacgatgtcgatctgtccaacaacaacaacatcactcctctgtggagg
cggcgcacgggcaaaaaaaaacaggactccagcaaaccgaagccgcgacctttcagctac
cacattaacggggccgcgacgacggacttccccgtggaggacaacaggtgttccctcacc
tcgggccaacctgctgagaagttggcggccgccccgccatgttcgggcagtaaccttgtg
gtgctgaagcacatcctacacaagccctccaggaaatcccgcgttgttcgaagcatcagc
atcgggcacctctccagtggacttttctcgctgtccagatttaggtccgaggacagcaga
tctgcttcactggacaatcgagtgtgtaatggagatcacgacagggggaaaagcagtaat
ggagagacggtgtggcccgaaaagcgtctcctggactcccacgtacgcctgtccagtcca
ttcactctgagtacacagaaagacgagatagcatttgggacgagttccccctcacccgaa
gcgtttcctgtcaactgttcctctcctgtcctttctcaatgcactcctaccaccaacaac
aacaactacaaccaccatgaactgtcttccctttcatctgcatccagctcctctcctcca
gcctgtcgcacccctacgccctcccacagctccatctccagcatcccctccctgtcttcc
ctcacctcctcagaccccccgacgccccgttccccgtcaccggcagacagaggacaggca
ctcctgaaacagtcttcgccctcgccggcctcctcacaggacaccaggcatgcctcttcc
tcctcttccatctcttccgcctcggcctctccctctctttctccatccatctctccttct
ccctccatcattctcagcacccacagtcgtgcggccctgaagatgggcacccagcagctc
attcccaagggtttagcatctgatgtgcggcagagcaaggtgcctccctctgggcagctt
ggccaaggtttggccgggctgcttgggctggaccattccaagcgagcgttgaaatccctc
agtatggtggagacaggggcctacttttccacaagcagggaccacagtgaagggacagag
ggcgagagcgagagcccggggacactgaggagaggcttgaggagtacatcctataggagg
gctgtcgtgagcggagtcgacttagaggtcccaggagtagatcccaaggttcatcggttg
tcccagccgctcatccaaggaccagaattggataagccagcttcaccggtgaacccagcg
agtcccggcaatgtcaacctcacgagcccagtaacagccaagcctgcgaggcctaggacg
cccaagcttgctagtcctgggacacctaaactgaccagccccggattttctaagccttct
agccctgggatagagaagcctaccagcactgggaagaacaagaatccagataagaagaag
gttttgacttctcagcggacatttgacagtgaggaggaggagctgtatcagaactaccag
gaaaaggccttgcacaacgattcagatgaggatgctgattcgagagattccgctggtgat
cgtggcatcgtggtgcagtacagacccatacgcacctcctggagccagctcagtgtggta
aagaaaagtggtctgtctgatcggatgagtcaagaggatcgcaaaagacaagagtccatc
tttgaggtgatctcgtcagagcactcatatctccacagtctggagatcctgatccgcatg
ttcaagaactctgcggagctcagcgaggccatgaccaagactgaacaccaccacctcttc
tccaacatcaccgacgtctgtgaggccagcaaaaggttctttaaggaattggaggaaaga
caccaacagaacatagtgatcgatgacgtcagcgacattgtctacaagcacgctcagtcc
aactttgacccttacgtcacatactgctccaatgaggtctaccagcagagaaccctgcag
aggctggtgtccaagaatccagctttcaaggaggtgctgaccaggatagagggccaccca
gactgcaggaacctccccatgatctccttcctcatcctgcccatgcagaggatcacccgt
ctgcccctgctcatggatacaatttgtcagaagacgcccaaagactctgcaccgtatgaa
gagtgtaagaaagctttacaagcagtcagcaaggtggtaaggaagtgtaatgaaggcgct
cggacaatggagagaacagagatgatgtacaccattaactctcagctggagttcaagatt
aagcctttcccgctggtctcatcctccaggtggatggtaaagagaggggagctgaaggcc
tttgtggaggacaacggcatcttcctcaagcggacgtcgcggcaacaggtctacttcttc
ctcttcaacgacgtcctcatcgtcaccaggaagaagagtgaggagagctacactgtgata
gactacgctctgagggaccagatctgggtgggctcctgccagctggaggatctcaacctc
tcgccggtcagaagcaccaccggcatgctcagctcccggcaagccggcgccaatcatctt
ttccgcctgcgtttccggagcaaccactcgggtgaaaaggtgcccatgatcctggggacg
gagttgctgaatgagcgcgctcgatggatcagtgctctgggccagaatgtgaccaacaac
aagagtcgggacagaatgcatgccatgcagatggaggtgatcagaacatacacagccaag
caacccgacgagttgtccctgcaggtggctgacgtggtgctggtctcgcagacggttgaa
gacggctggtgtgaaggtgagcgactgcgcgacggagagagggggtggttcctcgccgag
tgcgccgagccaatcacatgccaggtcaccatcgagcgcaacatgcagaggatggaccgc
ctgcaggggttggaaacgaacgtgtga
DBGET
integrated database retrieval system
