Scophthalmus maximus (turbot): 118299074
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Entry
118299074 CDS
T09850
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03440
Homologous recombination
smau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118299074 (brca2)
03460 Fanconi anemia pathway
118299074 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118299074 (brca2)
03036 Chromosome and associated proteins [BR:
smau03036
]
118299074 (brca2)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118299074 (brca2)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118299074 (brca2)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
118299074 (brca2)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
118299074 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
118299074 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
118299074
NCBI-ProteinID:
XP_035478365
LinkDB
All DBs
Position
11:9826432..9840577
Genome browser
AA seq
2944 aa
AA seq
DB search
MDLPSKNMYDAFKDHIWKELGPLDPDWFQVLTAQTFTGEGSVSDPDDLCANQEGHFKTPL
DKAALDSQLFSTPKVFRHRRVVSPETTEGEQSFTPEQEKETLPWTETQSPQLFRVTKESV
PGAKYGGMRHQNLEHFDMVHTPSKSPVSYAKQISESLGAQIHPDISWTSSLNTPPAVPST
LILSKTDESPCPMSVSEDKTVVIVRKLFPSLSNGAGVAATSPTNTGLPLPRGVISPEADQ
IPESHGSPQESLNPTASVWRQKLPDAIEGGDVRSTVASVLDGAENVLSIFFSNSSSALRK
VKTDRVKRKQIIATKEHGCSFTDILTANNAAVAPSEQRTEELEPVELSSPPQLKTRDIGI
TQWSPLSLSEIPPFTDSACCEKSHATQVENNILTERPQSDSVSGQLVRLPLTGTFSGFTK
RKRKFVYTIDTSRIQGKETASLKTDSSSQIPDSGYKVSADLLRKAPDEAACHSIRENEKQ
KQKNVTGENLPLSVQPNVQDLDMSQLCRDFEHDFTQTSDPGKLSEVAKDNPRNGFSPSAC
LSAMKQAKQKAKQASVPPDCDGVSVRRPVSATNQNDSINEGTVSDSGFQSAVADITHPTS
TSFILPSSENIGQSQQWSTTGTYRAASSLSTNTRNRGKNNLDEMLQEAETDAKLPGAIKE
SRTLVPCRKNEHTESTSTQLPGGAKGSVTSGICFPFECQVNDSFPEKTTVSLPSVHASGF
KTASNKTIKISSVDLEKAKHLFEENEAERTFSDQPSKRAHDTKDEISMSDVSGKNTIPNQ
PPSSREHFGDISCQLTVSQKADVTELCTLLEEADSQFEFTQFKTAKLQQHCQDNATSPRK
VDKELDPDFLMGIDFDDSFDDRRSDAEKHLVTAVMLDKMTLVADHKTNCETSKVTSKSSM
KKENASIEDALSSSKCISEGSHGIMSAEPQNLDRARCTETSKQENKSPLMLGGGFKTARG
NFLTVSKECLSKARALFADLEDNLTEQKSAGEQSGDAAAETDQRQVVCIKDNNAAKSFKN
DKIDTTTCQSGRGISISAKAMKEADALFKDCDISENNTGGSVKHEKNVEHLPSFLSHKKN
LLKCKNIQETEENFSAEGISEFKKGNAGPAACHTEVVQHIVEMQSAGLEDTKALTNAVSS
RGNLCSTAKTLSSPSGTASKNSGSSAVNQLSNGGGGFCTASGKKVSVSADAVKKAERLLS
EIHTHKDTNQQLKGEASRTAHLTNQFQVGRIENGGFQTASGKGVVISAAALKKAKSLLSE
CEAIEDKKPVCGLPSRNSGFLAASGKPVALSAAALQKAKALFSDITVNAGIPAASDTRKS
DSRRNNSGNSDKIPCGFMTAGGTTVCVSQNNLFKATNALREFDGGSLSEKTKQGANTFFK
DCDTENGVAPVSGGSSEHGHGCSEFENSNVGSVVNEENLTRHDNAEILKGVFKNSNSTSG
NPSFMAKPLSSPLCTTSKNTGSSAFSGFSNGVGFCSASGKRVSVSDEAMTKAKSLLNESA
TFPDTDKKSRGKADNMPPQIGGKDVALSFAAPEKAKTLPSKGVEDKISVESSLAKMPVSF
SPPRICGFLAASGKPMAFSSEALQKAKALFNDIGFSEVPIVSDKRKSDKHEDVKNINCGF
TTAGDVENINCGFTTAGGAKVQVSQKNLMNAKNLLKDFADGESPSESDLSNVKKASKSCL
TASRDKDMFTKESAPQVVKSFQSLQETEHENETLQNSTVHSCISVKRRAITVTSELKEGK
IVPSWEGNLRDTPVEEAVNVLGPGVNHTSSGEALRFKSTEESSFLMFQSLNLSGCSETQQ
RFFAQEALDCTKALLEDESLAGQSPTVEKGPLQDTTRSNDWSAEEQKGRGKRSVDDADMT
GQPPLKRRLLDEFDRTVDGPRGSTLHPQKSSPNSVMKDRRAFKYSVSPHPNITRPYGSGT
NYVETKLQNTTPTQRSASGDGRSAHCRVPAFVPPFLKNTKTETHKNAVVKVSIKTPSAFV
PPFKKQRTVVQESSCKPQEEEDKHQHVCIKPTSSNIYMSPSRNTQNSADATSDKSKEYIQ
AVALAHTTNDNLMNNQKAPGGCGSEDSAAMASCDEDTVHRGQDMFSNLENVEMARDMQDM
RIRKKKRQTIRPLPGSLFLTKTSGVQRIPLKAAVDGKPPARFTPKQLYGYGVHQHVFDIT
SETSETFRFNLKHFLKLEAFIDGGGVHLADGGWLIPSNDGTAGREEFYRALCDTPGVDPK
LISVEWAYNHYRWIVWKQASMERSFPETMSSLCLTPEQLLLQLKYRYDVEIDHSRRPALR
KIMEKDDTAAKTLVLCVCGVVSRGHSPNRPSRNDSKTPQGANAKVEPPFAVVWLTDGWYA
IKALLDEALTAMLHKGRLAVGGKLIMCGAQLVGSQEACSPLEAPESLMLKICANSSRLAR
WDAKLGFHRDPRPFLLPVSCLYSNGGPVGCVDIIILRSYPIQWMERKPDGGVVFRSVRAE
EKEARRYSSHQQKAMEILFAKIQTEFEKEQKGNDKPQRRRRTTNRQDIASLQDGEELYDA
VGDDPAYLEAQLSEQQSETLQTYRRSLMEKKQSELQDRYRRALEAENSDGSCPKREVTPV
WRLCIADSTAQPGSVYQLNLWRPPSDLQSLLKEGCRYKVYNLTTSDGKKRNGVENVQLTG
TKKTQFQDLQASQEWLLARFQPRASSNFVNLQNPEFQPLCGEVDLTGYIISVIDGLGSSP
AFYLADGELNFVKVRCFSSFAQSGLEDVVKLRVLLALSNLQLRGQSSSPTPVVFAGDLTI
FSTNPKEVHLQESLSQLRNLLQVQQNFFLNAEEKLSHLLKSDGLSSITSPALHPRTPAAT
NQRQDTKTSLISQQPIRSLGSFTPVSRNQPAVTASTEKDPKSLKRRRALDYLSRIPSPPT
LSHLGPGTSLCVKKTFNPPRRSGTPSTLKTVQTPARKTVVSPMEDEWVNDEELAMIDTQT
LRVG
NT seq
8835 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccctcgaagaacatgtacgacgccttcaaggatcacatctggaaagagctg
gggccgctggaccccgactggtttcaagtactgacggctcaaacgttcaccggtgaggga
agtgtctcggatccggacgacctctgtgccaaccaagagggacattttaaaacacctctg
gacaaagcggcgctggacagtcagctgttttcaactcccaaggtcttcagacacagacga
gttgtgtcacctgagacaaccgagggcgagcagtcgttcacgcctgagcaagaaaaggaa
acactgccatggacggaaacacaaagtccacagttgtttcgggtgacaaaggagagtgtc
ccaggagcaaaatatggaggaatgcggcatcagaatctggaacattttgatatggttcac
accccatcaaaatccccagtcagctatgccaagcaaatatcggaaagtcttggtgcacag
attcatcctgatatctcgtggaccagttctctgaataccccaccagctgtgccatccacc
ctgatcttatctaaaactgacgagagtccctgtccaatgagcgtttctgaagataaaacg
gttgttattgtacggaagctttttccgtctctttcaaatggggccggagttgcggcaaca
tcacccacaaacaccggcttgcctttgccccgaggtgtcatttcccctgaggctgatcag
attccagagtcccacggctcccctcaagagtcactgaatccaactgcgagtgtttggaga
cagaagctgccagatgctattgaaggtggagatgtccgcagcaccgtagcaagtgtccta
gacggagctgaaaatgttctttcgatatttttctccaacagtagttcagctctgagaaaa
gtgaaaactgacagagtcaagaggaagcaaatcattgccacaaaagaacatggctgcagc
ttcacagacatcttgactgctaacaacgctgcggttgcacccagtgaacagaggacagag
gaactggaacctgtcgagctttcctcacccccgcagttgaaaactagagatattggaatc
acccagtggtctccgttgagtttatctgaaattcctccctttaccgattctgcttgctgt
gaaaaaagtcatgctacacaagtggaaaacaacattttaacagaacggccacagagtgac
tctgtttccggacagctagtccggctgcctttgacgggcacattctctggatttactaag
agaaaaaggaaatttgtttacaccattgatacttcaagaattcaaggaaaagaaacagcg
tctctgaagactgactcctcatcacagattccagattctggatacaaagtgagtgccgat
ctgttgaggaaagccccagatgaagcagcctgtcacagtatcagggagaatgagaaacaa
aaacagaaaaatgtcacaggagaaaatctacctctctctgttcaaccgaatgtccaggac
cttgacatgtcgcagctctgcagggattttgaacacgacttcactcaaacttcagaccct
ggtaaactgagtgaagtagcaaaggataatcctcgaaatggcttctctccttccgcctgt
ctgtctgccatgaaacaagctaaacagaaagcaaaacaagcaagcgttccccctgactgt
gatggcgtcagtgtccgaagacctgtttctgctactaatcaaaatgactccatcaacgag
ggcacagtaagtgacagtggattccagtctgctgttgcagatatcactcacccgacttca
acgtcgtttattcttcccagctcagagaacattggccaaagtcaacagtggtcaaccact
ggtacctacagggcggcttcttctctatctacaaatacaagaaatcgtggaaagaataat
ttggatgaaatgttacaagaagctgaaactgatgccaagctgcccggtgccatcaaggag
agtcggacgttggtcccttgcagaaagaatgaacacacagagagcacatcgacacaacta
cccggtggtgcaaaaggaagtgttactagcggcatttgctttccattcgagtgtcaagtg
aatgatagtttcccagagaaaacaactgttagtcttccttccgtccatgcatcaggattc
aaaacggcttcaaataagacgattaagatttcctcagttgacctagagaaagccaagcat
ctctttgaagagaacgaagctgaaaggacttttagtgatcagccatcaaaaagagcccat
gacactaaagatgaaattagcatgagcgacgtatcagggaaaaatacaatcccgaaccag
ccaccttcttcaagagaacattttggggacatcagttgccagctaacagtgtcacaaaaa
gctgatgtgacagaactgtgcactctgctggaagaagccgatagccagtttgaatttaca
cagttcaaaactgcaaagctacagcaacattgtcaagataacgccacttccccccgaaaa
gtcgacaaagaacttgaccctgattttctaatgggtatagattttgacgacagcttcgat
gaccggcgttcagatgctgaaaagcacctggtaacagctgtgatgcttgataaaatgacc
ttggttgcagatcataaaacaaactgtgagacatcgaaggtgacaagtaaatcctcaatg
aaaaaagaaaatgcctctattgaagatgctctttcctcctcaaagtgcatctctgaaggc
agtcacggtattatgtcagctgaaccccaaaatcttgacagggccaggtgcactgaaaca
agcaaacaggagaacaaaagtcctttgatgctcggtggaggattcaaaactgcacgagga
aattttttgacggtgtcaaaagaatgcctgagcaaagcgagagctttgtttgcagattta
gaggataatctgacagagcagaagtcagcaggcgagcaaagcggtgacgctgctgctgaa
accgatcagagacaggtcgtgtgcattaaagataacaacgctgccaaaagctttaaaaat
gacaaaattgacacaaccacgtgtcaaagtgggagagggatttctatttcagcaaaagct
atgaaagaggcagatgctctcttcaaagactgtgacatcagcgaaaataacactggcggg
tcagtaaaacatgaaaagaacgttgaacacttgccttcatttctcagtcacaagaaaaat
cttttgaaatgtaaaaatattcaagaaactgaagagaacttctctgcagaagggatcagt
gaatttaaaaaaggaaatgctggaccagctgcgtgccatacagaggtcgtacagcacatt
gtggagatgcaaagtgctggtttggaggatacaaaggctttaacaaatgcagtttcttct
cgtggaaacctgtgttcgactgcaaagacactttcttctccctcgggcacagcatcaaag
aattctggctcctctgccgttaatcaattgagcaacggtggaggcggattctgtacagcc
agtgggaagaaagtctccgtgtcggctgatgcagtgaaaaaagcagagcgccttttgagt
gaaattcacacgcacaaggacacaaaccaacaactgaagggagaggcttcgagaacggct
catctcaccaatcagtttcaagttggacgaattgaaaatggtggattccaaacagccagt
ggcaaaggagtcgtcatctcggctgcagctctcaagaaagcaaagtcattgttaagtgag
tgtgaagcaattgaggataagaagcccgtttgtggtcttccatcccgcaacagtgggttt
ctcgcagccagtggtaagcctgtggcactttcagctgcggccctccagaaggcaaaagct
cttttcagtgacataactgtcaatgcagggatcccagctgcctcagacacgaggaaaagt
gacagcagacgaaacaatagtggaaactctgacaaaataccttgtggtttcatgacagca
ggcggaacgactgtctgtgtgtctcagaacaatctgttcaaagcaacaaacgctttgaga
gagtttgatggtggttctctttcagaaaaaacaaagcaaggagcaaatactttcttcaaa
gactgtgacactgagaacggcgtcgcacctgtgagtggaggcagcagcgagcatggacat
ggatgcagtgagtttgaaaactcgaatgtgggatcagttgtaaacgaagaaaacttaacg
cgtcatgacaatgcagagattctcaaaggtgtttttaagaactcaaattctaccagtgga
aacccgtctttcatggcaaagccgctttcttccccgttgtgcacaacatcaaagaacaca
ggttcctctgccttcagtggatttagcaatggtgttggattttgttcagccagtgggaaa
agagtatctgtgtcggatgaggcaatgacaaaagcaaaatcgctattgaatgaaagtgct
acctttccagacacagacaaaaaatcaaggggaaaagcagacaacatgccaccacagatc
ggcgggaaagatgttgctctttcatttgcagccccggagaaagcaaaaactctgccaagt
aaaggagttgaggataaaatcagtgtggagtcatcacttgctaagatgccagtttccttt
tcaccacccaggatctgtggatttcttgcagccagtggtaaaccgatggcattttcatcc
gaggccctccagaaggcaaaagcactgttcaatgacatcggtttttcagaggtcccaatt
gtttcagataaaaggaagagtgacaaacacgaagatgtaaaaaacataaattgtggtttc
acgactgcaggggatgtagaaaacataaattgtggtttcacgactgcagggggagcaaaa
gttcaggtgtcacagaaaaatcttatgaatgcaaagaaccttttgaaagattttgcagat
ggggaaagtccttcagagtcagatctatcaaatgtgaaaaaagcctcaaaatcttgtctc
actgcatcgagagacaaggacatgttcactaaggaaagtgcccctcaggtagttaaatct
tttcagtctttgcaagagactgagcatgaaaatgaaactctacaaaactcaactgtacat
agttgcatttctgtcaaaagaagagcaattacagtcacatccgagttgaaagaaggcaaa
atagtcccatcatgggagggcaacctccgtgacactcctgttgaggaagcagtaaacgtg
ttgggccctggagtaaaccacaccagcagcggtgaggcgctcaggttcaaaagcacagag
gagtcttcatttctaatgtttcagtcactaaacctcagtggctgctcggaaacccagcag
aggttttttgcccaggaagctctcgactgcactaaagctttgttggaggatgagagtctg
gctggccaaagtcccacagtagaaaaggggccactgcaagatacaacaaggtccaacgac
tggtctgcagaggaacaaaaaggaagagggaaaagatctgttgacgatgcagatatgacg
ggtcagcctccgctgaaaagacgattacttgacgaatttgatcggactgttgatggtcca
agaggttcgacacttcatccgcaaaaaagttccccaaatagtgtaatgaaagacagaaga
gctttcaagtacagtgtctctcctcatccaaacatcacaaggccatacgggagtggaaca
aactatgtggaaaccaaactgcaaaacaccacaccaacacaacgctcagcctccggagac
ggcagatcagcacactgcagggtgccggcgtttgttcctccgttcctcaagaacacaaag
acagaaacgcacaagaatgcagttgtcaaagtcagcataaagacaccgtctgcatttgtt
cctccgttcaaaaaacaaagaactgttgtccaagagagctcctgtaaaccacaggaggag
gaggataaacaccagcatgtctgtataaaacccactagcagcaatatttacatgtcaccc
tctagaaacacacaaaacagtgcagatgcaactagtgataaaagcaaagaatacattcaa
gcggtggccttggctcacactacaaatgataatttgatgaacaatcaaaaagctcctggg
ggctgtggatcagaggactctgctgcgatggcatcgtgtgacgaggacacagttcacaga
ggccaagacatgttttcgaatctcgaaaatgtggaaatggcacgagatatgcaagacatg
aggatcaggaaaaagaagcgccagacgattcgaccgttgccgggcagtttgtttctaacc
aaaacctcaggggttcagaggatcccgctaaaagctgccgtggatggaaagcctcctgcg
agattcaccccaaaacagctgtatggttatggagtgcaccagcatgtgttcgacatcacc
agcgagacctcagaaacgtttcgcttcaatttgaagcacttcctgaaactggaagcgttc
atagacggagggggtgttcatctcgctgatggagggtggctaatccccagcaatgatggg
actgcaggaagagaagagttttatagagcattatgtgacactccgggtgtggatccaaaa
ttgattagtgtggagtgggcgtacaatcactacagatggattgtttggaaacaggcctcc
atggagagatcttttccagaaaccatgagcagcctctgtctcacaccagagcagcttctc
ctgcagctgaagtacagatatgatgtggagatcgaccacagtcggaggcccgctctgaga
aagatcatggaaaaggacgacacggcagctaaaaccctggtcctctgtgtatgcggggtc
gtctccaggggtcactccccaaacagaccgagtcgcaatgactccaagactccacaaggt
gccaatgcaaaggttgaacccccattcgcagtcgtttggctgacagacggatggtacgcc
attaaagctctgctggatgaggctctgactgccatgcttcacaaaggtcgattggctgtt
ggtgggaaattgatcatgtgtggggctcagctggtgggatcacaagaggcttgctccccg
ctggaggcacctgaatctctcatgttaaagatttgtgccaatagcagcagattggctcgg
tgggatgctaaactgggatttcaccgagatccccggccattcttgcttcctgtctcatgt
ttgtacagcaacggagggccagtaggatgtgtggacattatcatactgagaagctacccc
atacagtggatggagaggaaaccagatgggggagttgtgttccgttctgttcgcgcagaa
gagaaggaggcgaggcgatacagcagccaccaacaaaaggccatggagatcctctttgcc
aagattcaaactgaatttgaaaaggagcagaaaggtaatgacaaacctcaacgcaggagg
cggacgacaaatcggcaggatattgcaagtctgcaagacggagaggagctgtatgacgca
gtgggggatgatccagcatacctggaggctcagttgagtgaacaacagtctgagacctta
cagacgtacagacgctctctgatggagaagaaacagtccgaactgcaggaccgataccgc
cgcgctctcgaagcagagaacagtgacgggagctgtcccaaacgagaagttacaccagtg
tggagactctgcatcgctgactccacggcccagcctggctcagtttaccagttaaatctt
tggcgacctccctcagatcttcagtctttactgaaagaaggctgtcgatacaaagtctac
aacctcaccacgtcagatggaaagaaacgcaatggagtagaaaatgttcaactcaccggg
acaaagaaaacacagtttcaggacctgcaggcttcccaggaatggttattagcacgtttt
caaccgagggcttcaagcaattttgtgaatcttcaaaacccagaattccagccactctgt
ggagaggttgatctcacgggatacatcatcagtgtcattgatggactgggttcctctcct
gcgttttatttggctgatggggagctgaactttgttaaagtgcgctgtttcagcagcttt
gctcagtctggcctggaagacgttgtaaaactgcgtgtgctgttggctctgagcaacctg
cagctgagaggtcagtcctcatctcccactcctgtcgtcttcgctggagatctgaccatc
ttctccacaaaccccaaggaggttcacctacaggaatccctaagccaactcagaaacctg
ctccaggttcagcagaacttttttcttaatgctgaagagaagctttcacatctactcaag
tctgatggcctgagctccatcacttctcccgctctccaccctcgaaccccagctgcaacg
aaccaaagacaagacaccaagacaagtctgatatctcagcagccaatcagaagcctcgga
tctttcacaccggtcagcaggaatcagcctgcagtgaccgcttcgacagagaaagacccg
aaaagcctgaagaggagaagagctctggactatctttctcgtatcccgtctccaccgact
ctgtcccatctgggcccagggacttctctgtgtgtgaaaaagacattcaacccccctcga
aggtccgggacaccaagcactttaaaaactgtacagactccagctcgcaaaacggttgtt
tcgccgatggaagatgaatgggtgaatgacgaagaactggcgatgatcgatactcagaca
ttgcgtgtcggctga
DBGET
integrated database retrieval system
