Scophthalmus maximus (turbot): 118299086
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Entry
118299086 CDS
T09850
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118299086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118299086
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118299086
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118299086
NCBI-ProteinID:
XP_035478389
UniProt:
A0A8D3BA91
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Position
11:complement(4858811..4898790)
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AA seq
753 aa
AA seq
DB search
MENGRTQSKVEPDQDQEEEGNSLDWLLRKDVSEGIPAPMDTNVLTSSVSGDNISSKAFTR
ARVFEAASQGDATQLRGLLHYLRVHDKRLTSPEFTDETNGKTALLKALLNLKDGRNDTIE
VLLDIAEETGDLDNLINAAYKDLFYKGQTALHVAIERRSFEHVKLLVQKGADVQARANGK
FFQRHAGLGFYFGELPLSLAACTNQHNIVSFLIENPHRRADLAEKDSQGNTVLHTLVVIA
DNTKENTDVVARMYDEILVQHSRLEKTRRVKLEEIENNQGLTTLKLAAKLGKIGLFRHIL
HREFEDEEMRPLSRKFTEWVYGPVHSSLYDTSSIDTNEDNSVLEIVVFGSEIPNRPEMLQ
IEPLRSLLKDKWNRFASKLFLMNFSAYLIYVIIFTTVALYRKDGQPPFPIEDVPVDYLRS
VGELISVLGAVWFLFKAITIFKGNPPNFKALYTDGFCDILFFLQATLLLICTILYICGRR
EYVGLLVLSLALAWINVLYYSRGSKAMGIYSVMMQRMILGDLLHFLCVYSVLLFGFSAAI
VALIDNSAPAPKELTNGSPPRGRSFGDETFKCEKPSYNDIRFTILELFKFTIGMGDLEFT
DHVQYKEVFYILLILYIVLTYILLLNMLIALMGNTCERITEESENIWNLQRAFTILDMER
TLPRGLRSKLFTGESKMVCLRGKKDECRRFFRVEEMNWSQWRTDLGVIREEDPGNHMMEP
QPLSHTPGNLWNMNPLLERIRARRHQLQHSSVP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatggacgaacacagagcaaagtggagccagaccaagaccaagaagaggagggg
aacagtctggactggctcctcagaaaagacgtctcagagggaattcctgcgccgatggat
accaacgttctgacgtctagtgtcagtggtgacaacatttccagtaaagcattcaccagg
gcgagagtctttgaagcagcatctcagggggacgcgactcaactgcgtggcctgctccac
tacctgcgagttcatgataagcgactgacgagcccagaattcacagatgaaacgaatggg
aaaacggcgctcctgaaggctttgctaaatctaaaagacggcagaaatgacaccattgag
gttctcctcgacatagcagaggaaaccggagatttagacaatttaatcaacgcagcttac
aaagatcttttctacaaaggtcagacggccttgcatgtcgccattgaaagaaggagcttt
gagcacgtgaaactgctggtccagaaaggagcagatgtgcaggccagagccaacgggaag
ttcttccagcgtcacgcgggactgggcttttattttggagaactcccgctgtcactggcc
gcctgcaccaaccagcacaacattgtgtccttcctcattgaaaacccgcacagaagagca
gacttggccgaaaaggactcgcaagggaacaccgtcttgcacaccttggtggtcatagcg
gacaacacaaaagaaaacacggacgtggttgcaaggatgtatgacgagatcctcgttcag
cacagcagacttgagaagacacggagagtcaagctggaggagattgaaaataatcagggg
ctgaccactctgaagttagcagccaagctgggaaagattgggctgttcaggcacattttg
caccgggaattcgaggacgaggagatgaggccgctgtccaggaagttcacagaatgggtc
tacggaccagtccactcctcactctatgacacgagttccatcgacactaacgaagacaac
tccgtgttggagatagtcgtctttgggagcgagattccgaatcgtcctgagatgctccag
atcgagcctctgcgcagtcttctcaaggacaaatggaacaggttcgcttccaaattattc
ctgatgaatttctcggcgtatctgatatacgtgatcatcttcaccactgtggccttatac
agaaaggatggacagccaccgtttcccatcgaggatgtcccagttgactacctccgcagt
gttggtgagctcatcagtgtcctcggagcagtttggtttctctttaaagcgataaccatt
ttcaaggggaaccccccaaacttcaaggctctatacactgatggattctgtgacattctg
tttttcctgcaggccaccctccttctgatctgcacaattctgtacatctgcgggcggaga
gaatatgtcggactccttgtgctgtcactggctctcgcctggatcaacgtcctttactac
tcaagaggctcgaaagcaatggggatatacagcgtcatgatgcaaagaatgatcctgggt
gacctgttacactttttatgcgtctacagtgtcttgctgtttggattttctgcagccatc
gttgctctcatagacaactctgctccagctcctaaagaactgaccaatggctcaccgcca
cgtgggaggagctttggtgacgagacgtttaagtgcgagaagccgagttacaacgacatc
cgatttacaatcctggagctgttcaagttcaccatcggaatgggagatctggagttcact
gatcacgtgcagtataaggaggttttctacatcctcctcatcttgtacatagttttgacc
tacatcctcctgctcaacatgctcattgccctgatgggcaacacgtgcgaaagaatcacc
gaagaaagtgaaaacatatggaacctgcagagggcctttaccattctagacatggagagg
actctgccgagaggcctgaggagtaaactgttcactggagagtcgaagatggtgtgtttg
agaggcaagaaggacgagtgtcggagatttttcagggtggaggaaatgaattggagccaa
tggaggacagatcttggtgtgatccgagaggaagacccaggaaatcacatgatggagccg
cagcccctcagccacactcctgggaatctctggaacatgaatccactgttggagaggatt
cgagccagacgccaccaactgcagcattccagcgttccctaa
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