Scophthalmus maximus (turbot): 118299161
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Entry
118299161 CDS
T09850
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118299161 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118299161 (snrpa)
Spliceosome [BR:
smau03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
118299161 (snrpa)
Complex B
118299161 (snrpa)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
118299161
NCBI-ProteinID:
XP_035478540
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Position
11:12753949..12756580
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AA seq
279 aa
AA seq
DB search
MATTDVRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARNLKMKGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKIKVPDAAGA
KKGVPGAAPMVAGVPAAMPGMPPMSQAPRMMHIPGQPPYMPPPGMMPPPGMAPGQMPPGA
MPPGQMMPGQMPGQMPPQAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGR
HDIAFVEFENEVQAGAARDALQGFKITQANAMKISFAKK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccacaacggacgtccggcttaaccacacgatctacatcaacaacttgaatgagaag
atcaagaaggatgagctcaaaaagtctctgtacgccatcttctcgcaattcggccagatt
ttggacatcttggtcgcgcgaaaccttaagatgaagggtcaggcctttgtgatcttcaag
gaggtgaacagcgcttccaatgctctgagatccatgcagggattccctttctatgacaaa
cccatgcgtatccagtacgccaagcaggactctgacatcatagctaaaatgaaggggacc
tatgtggagcgtgaccgcaaaaaagagaaaaagatcaaggttccagatgcagcaggagct
aagaaaggtgtaccgggagctgcacccatggtcgctggggtacctgctgccatgcctgga
atgcctcccatgagccaggctccacgcatgatgcacataccaggccagccgccctacatg
ccccctcctggcatgatgcctcctccggggatggcacctggtcagatgccccctggtgcc
atgcctcctggtcagatgatgcccggacaaatgcctggacaaatgcctccccaggccgaa
aatccacccaatcacatcctcttcctcaccaacctgccagaagagacgaacgaactcatg
ctctcgatgctcttcaaccagttccctgggttcaaggaggtgcgtctggtccctggtcgc
cacgacatcgcctttgtggagtttgagaatgaagtgcaggccggagctgcgcgtgatgca
ctgcaaggctttaagatcacacaagcgaacgccatgaagatctcattcgcaaagaaataa
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