Scophthalmus maximus (turbot): 118299197
Help
Entry
118299197 CDS
T09850
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X5
KO
K06491
neural cell adhesion molecule
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
smau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
118299197 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118299197 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118299197 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118299197 (ncam1b)
04090 CD molecules [BR:
smau04090
]
118299197 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118299197 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smau00537
]
118299197 (ncam1b)
04091 Lectins [BR:
smau04091
]
118299197 (ncam1b)
Membrane trafficking [BR:
smau04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
118299197 (ncam1b)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
NCAM1/2
118299197 (ncam1b)
CD molecules [BR:
smau04090
]
Proteins
118299197 (ncam1b)
Glycosaminoglycan binding proteins [BR:
smau00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118299197 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smau00537
]
Others
118299197 (ncam1b)
Lectins [BR:
smau04091
]
I-type lectins (Siglecs)
118299197 (ncam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_DSCAM-DSCAML_C
V-set
V-set_CD47
Ig_5
C2-set_2
C1-set
Pur_ac_phosph_N
Adeno_E3_CR1
Ig_C17orf99
C2-set_3
C2-set
E217_gp29
Motif
Other DBs
NCBI-GeneID:
118299197
NCBI-ProteinID:
XP_035478599
LinkDB
All DBs
Position
11:complement(11042682..11110181)
Genome browser
AA seq
1223 aa
AA seq
DB search
MVQSRDIFFALLLAGCTVSLEVQITPSHGEISLGESKFFMCEVVGVAKHIDWFGPTGDRI
EPNRPDITVARNDESSSTLTLYKAGTENAGTYKCVATNGDQQVESTVNVKIFQKITFTNA
PSPQEFTEGDNANIVCDVISSPPPTVLWKYKGARIQMEKDVRFKVLNNNHLQIRGIKKTD
EGAYTCEGRLMARGEIDLRVIKVVVNVLPTIRVWQSEVNSTADVGQSAMLTCAVDGYPEP
MVTWTRNDVVLDAGEKYSFNEDGSEMTLMDVTKLDEGEYTCIAKNKAGESEQELSLRVFV
KPKITYTVNQSTSELEEQVTLTCEASGDPTPTMNWSYGERVFTDGEQSLDGNVVVRSDAR
VSSLTLKYVKYTDAGQYLCTARSAIGEDGRLVYLEVRYAPKIHGNVAMYTWEGNAVNISC
EVKAHPSDVSILWLRDGLQLPNSNTTNIKIFRTPSTSYLQITPESENDFGSYNCTASNEM
GTEHKEFLLIQADVPSAPFISEVKPFSTTAQVQFEEPESTGGVPVLKFRAEWRPQGKGSW
VQRVYEVQDGSISEATITGLKPETNYEMKLTAINGKGEGESSPAEFFKTEPVHNTFRFSP
DVTEGNPNPPKIEGALQPKGNSLKVSLIKQDDGGSPIIHYLVRYKPIQASEWKPEIRLPS
SSEYVVFSGLEWDTEYNVFVVAENQKGKSQPATMSFRTSTEPDAIPDLSDEAALSMGIML
WAGILVVVFILLLLAVDVTCYFVNKCGLIMCLCGKSGTGTKGHNLEEGKAAFVKDESKEP
IVEVRTEDECTANHNAAGPTEPNETTPLTEPELAAFTAALALENLSSVATNSDTATATID
PAQDSPSSETTTLTCSLSTPANDPSPSPTPIPAPAPTPESNTTPPTPVLSSSVVEAKMAP
LLEQRGSYAPEEPEKITTPPCTPEQPKPQKSGTPIPPKRRHSPKLAALNAKGSPPVSPLV
ASSSSSSPTFGTKKHAPSPPVTKLLTQQDTETPAQTASTLTNTAPPKPHTDSNTTAPHSS
GRSLTASDTNKPSDQTVDNNIPTAKEAAASSSPSVIHSALTVLGAEQSAPLVAEVPSPLP
ITQISSSSSPAPPSLQASVSNDFLTAPPDMYDLLTPDVGPRSTALDLELMNGTERRSLPP
ADLISLDSPLSAPSLPNGDGADLPPSGPVLEASETLAKTAPPVNDEKLFSDEKVKLEEEG
LSNALIAAEHNSVTQTKTTESKA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggtccagtcaagggatattttcttcgccctgcttctcgcgggctgcacagtttcactg
gaagtgcagatcacaccaagtcatggtgagattagccttggagagtccaaattcttcatg
tgtgaagttgtaggggttgccaagcacatagactggtttggaccaactggggacaggata
gaaccgaacagaccagacataacggtagcacgtaatgatgagtcatcgtccaccctcaca
ctgtataaagctgggactgaaaatgccggcacatacaagtgtgtcgctaccaatggagac
cagcaagtggaatcaaccgttaatgtgaaaatctttcaaaaaatcaccttcacaaatgca
ccctcacctcaagagttcaccgaaggagacaatgccaacattgtttgcgacgtcatcagt
tcacctcctcccactgtcctctggaaatataaaggagcaagaatacagatggagaaagat
gttcgcttcaaggtgctgaacaacaatcaccttcagatccgtggcataaagaagacagat
gagggcgcatacacatgcgagggtcgcctcatggcccgcggcgagattgatctgcgggtc
atcaaggtcgttgtgaacgtgctcccgaccatcagggtatggcagtcagaggtaaattcc
acagcagatgttgggcagtctgccatgttgacttgtgcagttgatggctatcctgaaccc
atggtgacatggacaaggaatgatgtggttctcgatgcgggagagaagtatagctttaac
gaagatggctcggaaatgacattaatggatgttaccaagctggatgaaggagagtacacc
tgcattgccaagaacaaggctggggaaagtgagcaggagctcagtctaagagtgtttgtc
aaaccgaagatcacatacacggtaaaccagagcacttcagaattggaggagcaggtaacc
ctgacttgtgaggcttcaggcgatccgactcccaccatgaactggagctacggagagcgc
gtcttcactgatggagagcagagtctggatggaaatgtggtggtgaggagtgatgctcgg
gtgtcctcgctcactctgaagtacgtcaagtacacagacgctggtcagtacctctgcaca
gcacgcagtgccatcggagaggatggtcggctggtatatctggaggttcgctatgcccct
aaaatacatggtaatgtggcaatgtatacctgggagggaaacgcggtgaatatcagctgt
gaggtcaaggctcatcccagtgatgtgtctattctttggctgagagacggactgcaactc
cccaactcaaacaccaccaacattaagatcttcagaactccatccaccagctatctgcag
ataaccccggagtctgaaaatgactttgggagctataactgcactgcctctaatgagatg
ggcacagagcacaaggagttcctgctcatccaggctgatgtgccatcagctccgttcatc
agtgaggtgaagcccttctccaccacagcacaggtccagtttgaggagcccgagtccact
ggaggtgttcctgtcctgaaattccgggcggagtggaggccgcagggcaagggcagctgg
gtgcagagggtgtacgaggtccaggatggctccatcagtgaggcgactatcacaggcctg
aagccagagaccaactacgaaatgaagttgactgccatcaacggcaagggtgaaggtgaa
agcagcccggctgagttcttcaagacagagcctgtccacaacacttttcgtttttcccct
gacgttacagaagggaatcccaaccctcctaagattgaaggggctcttcaacctaaaggc
aactccctaaaggtcagcttgatcaagcaggatgacggcggctcacccatcatacattat
ctcgtccgctataaacccatacaagcgtcagagtggaaaccagaaatccgactcccgagc
agcagcgagtacgtggttttcagcgggctggagtgggacacagagtacaatgtgtttgtg
gtggctgagaatcagaagggcaagtcccagccagcgaccatgtccttcaggacgtccaca
gagccagacgccatcccagatctgagtgacgaggcagcgctctccatggggatcatgctc
tgggcagggatccttgtcgtggtgtttatactgctgctgctggctgtggatgtcacctgt
tactttgtcaacaaatgtggcctcatcatgtgcctctgcggcaaatctggcacaggcacc
aaaggacacaacttggaggagggcaaggcagcgttcgtgaaagatgagtccaaagagccg
atagtggaagtcagaacagaggacgagtgcacagccaatcacaacgcggcaggaccgaca
gaacccaatgaaacgacgcctctcacagagccagagctggcggctttcactgctgctctg
gcactggaaaacctctcctccgtagccaccaactctgacacggccacagcaacaattgac
cctgctcaggacagcccctctagcgagaccactaccctcacttgtagcctgtctaccccg
gccaacgacccctccccctcacccacccccatcccggccccggcccctactccagagtcg
aacacaaccccgccgactcctgtgctctcttcgtctgtcgttgaggctaaaatggccccg
ttactagagcaaagaggaagttacgccccggaagaaccggagaaaataaccacccctcct
tgtacacctgaacagcctaaaccgcaaaaatcggggacaccgataccaccgaagcgtaga
cactcccccaaactcgccgcactgaatgctaaaggcagcccccccgtatcgccgctcgtt
gcatcttcctcatcgtcctctcccactttcggtaccaagaagcatgctccaagcccgccg
gttaccaagcttctcacgcagcaagacactgagacaccagcgcaaactgcctccactcta
accaacactgcccctccaaaaccacacactgattccaataccactgccccacattccagc
gggcgtagccttactgcctccgacaccaacaaaccttctgaccaaactgttgataacaac
atacccactgccaaagaagctgcggccagcagctctccttcagtgatccacagtgctctt
acggtcctgggcgctgaacaatctgcccctctagttgcagaagtcccctctcctcttcct
attacccagatctcttcttcttcttctcctgccccccctagtctacaggcgtctgtctcg
aatgatttcctcacagcaccgccagacatgtatgacttactaacccccgatgtggggccc
agaagtacagctttagacttagagctgatgaacgggaccgagagacgctcgctgcccccc
gccgaccttattagcttagatagcccgctctctgccccctctctgcccaacggagacgga
gcagacctccccccctcaggcccagttctggaggcatcagagactctggccaagactgct
cctcctgtcaacgatgagaagcttttttctgacgagaaagtcaaactggaggaggaggga
ttgtcaaacgccctgatcgctgcagaacacaacagtgtcacacagacaaaaaccaccgag
agcaaagcatga
DBGET
integrated database retrieval system
