Scophthalmus maximus (turbot): 118299226
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Entry
118299226 CDS
T09850
Symbol
cldne
Name
(RefSeq) claudin e
KO
K06087
claudin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03272
Virion - Hepatitis viruses
smau04382
Cornified envelope formation
smau04514
Cell adhesion molecule (CAM) interaction
smau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
118299226 (cldne)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118299226 (cldne)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118299226 (cldne)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118299226 (cldne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smau03037
]
118299226 (cldne)
04147 Exosome [BR:
smau04147
]
118299226 (cldne)
Cilium and associated proteins [BR:
smau03037
]
Other cilia and associated proteins
Stereociliary proteins
118299226 (cldne)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
118299226 (cldne)
Exosomal proteins of colorectal cancer cells
118299226 (cldne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM37
DUF1129
DUF7319
Motif
Other DBs
NCBI-GeneID:
118299226
NCBI-ProteinID:
XP_035478648
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All DBs
Position
11:6259268..6260642
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AA seq
210 aa
AA seq
DB search
MVSLGRQMLGFALAIIGFLGTIIVCALPMWKVTAFIGANIVTAQVIWEGLWMNCVTQSTG
QMQCKIYDSMLALPQDLQAARALVVVAIIIAALGVLMGIVGGKCTNFVEDQNAKAKVAIA
AGIIFICAGVLILIPVCWSANTIIRDFYNPIMTNAQRRELGAALYIGWGTAALLILGGAL
LCSSCPQKDSPEYPVKYSGARSTATSRAYV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctgggacgacagatgctgggctttgccctggccatcatcggcttcttgggg
accatcatcgtttgtgctctgcccatgtggaaggtcacagccttcattggagccaacatt
gtgacggcgcaggtcatctgggaaggtttatggatgaactgtgtcacgcagagcacaggc
cagatgcagtgcaagatctatgattctatgctggctctacctcaggacctccaggctgcc
agggctctcgtggtcgtcgccatcattattgcagcccttggggtcctcatgggcatcgtc
gggggcaagtgcaccaactttgtggaggaccaaaatgccaaggccaaggtggccatcgcc
gcaggaatcatcttcatttgtgccggcgttctcatcctcatcccagtctgctggtctgcc
aacaccatcatcagggatttctacaaccccataatgaccaacgctcagaggagagagctg
ggagcggccctctacatcggctggggcacagcagcacttctcatcctgggtggtgccctc
ctctgcagctcctgccctcaaaaagatagcccagagtatccagtcaagtactccggtgcc
aggtcaacagccaccagccgagcgtacgtctga
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