Scophthalmus maximus (turbot): 118299243
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Entry
118299243 CDS
T09850
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118299243 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118299243 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118299243 (srsf1a)
Spliceosome [BR:
smau03041
]
Common components
Common spliceosomal components
SR proteins
118299243 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118299243
NCBI-ProteinID:
XP_035478690
UniProt:
A0A6A4SGH2
LinkDB
All DBs
Position
11:complement(10176667..10180670)
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AA seq
245 aa
AA seq
DB search
MSGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFE
DPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVI
VSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE
GETAYIRVKLDGPRSPSYGRSRSRSRGSRSRSRSHSVSRSRSNSRGRGRGSPRYSPRHSR
SRSRS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgttgtgcgaggccccgctgggaacaacgactgtcggatctatgtggggaac
ctcccgcccgacatccgcaccaaggacgtggaggacgtgttctacaagtacgggacgatc
cgagacatcgacctgaagaaccggagaggggggccgccgttcgccttcattgaattcgag
gacccgagggacgccgacgacgcggtgtatggacgcgacggttacgactacgacggctac
agactgcgggtggagttccctcggagcggcaggggctccagaggcggcttcggagggatc
ggcggagcccccaggggccgatacgggcccccgtccagacgctccgagtacagggtcatc
gtgtcagggcttcctcagagcggcagctggcaggacctgaaggaccacatgcgcgaggca
ggcgacgtgtgctacgcggatgttttcagagatgggacgggggttgtagaatttgtccgc
aaagaggacatgacctatgctgttcgaaagctggacaacaccaaattccgttctcatgag
ggagagactgcttacattcgtgtgaaattagacggtccccgcagcccaagttacggaaga
tcacgctcccgcagccgtggcagccggagcagaagccgcagtcacagcgtcagccgcagt
cgaagcaattcccgcggccgcggcagaggatcgccccgctactcgcctcgtcacagccgc
tctcgctcccgttcctaa
DBGET
integrated database retrieval system
