Scophthalmus maximus (turbot): 118299265
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Entry
118299265 CDS
T09850
Name
(RefSeq) myelin-associated glycoprotein
KO
K06749
sialic acid binding Ig-like lectin 10
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118299265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
smau04091
]
118299265
Lectins [BR:
smau04091
]
I-type lectins (Siglecs)
118299265
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
V-set
ig
Ig_CD22
C2-set_2
Izumo-Ig
DUF2631
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
118299265
NCBI-ProteinID:
XP_035478742
LinkDB
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Position
1:complement(17917220..17923362)
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AA seq
767 aa
AA seq
DB search
MEEEMDGPKHRIRTFVLIWAPLLFFMRSSNAETGASLEGREFCSRENDQYCITLTEAKIT
AEAGLCVVIPCSFTTDNDFRPQTAVWYKCDAARPNCGEADVIFHSNVYNRYVQPGFKGRV
LLLESRVWWKNCSIIINDLKESDSGSYQFRVKGYLHGRASGFSFSPRATVSVKGLSQKPT
VAIPPLTAGRPATLTCTAPGLCFGSEPSIGWTWRGAGERGSHITGNITALRAESLVAFAR
RHSSTLTFNPSAEHHGTNITCEVTFAGQVTTEETATLIVTYVKEVRISQSTSVKEGETLN
LTCSVESFPPSLIAWTKLSDQNGTGRNLQNDTLTDLRNDTERHPQEKGGTATLYIPNVAA
EDSGQYICTVQHLNNTWTGNVNVTVIYVREPVITGHTAVNRGDDLHLTCSVDSFPPSLVK
WTKLGSSTNLHSGSDMRNDTGSATLIIPNVATGHSGRYICAAEHLYKAVTVYADVTVTWF
SNILKNSGCGVQSEVLTCVCVSEGFPLPAIEWPLLKNNTEYSIITTVSNHTVNSTVVLTV
KGRPNTSVECVSSNINGEARENLTIGLTPSGHLGEGPSPKMSQNVSWLGTFIAFFIGAIL
SAVICFLAKTCHRKKQGAPGNLDETLEMVTGQEDTLMHDGQAATGDQTHGRGRAEDGTVA
VEKRAPGLDTGPEDVNYVSIDFSRLKRKSGRDAAEKQETTETVYAEIKKQAKEERGGDGG
AEGEMLEGKDEEAMIEEDEETKRCVPQEEEGDDLAVYSNVQDIMAAM
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaatggacggtcccaagcatcgaatcaggacgtttgttctcatctgggcg
cctctgcttttctttatgagaagcagcaatgcggagacaggtgcttcattggagggaaga
gaattctgctcaagggaaaatgatcagtactgtatcactctcactgaagcaaaaataaca
gcagaggctggactctgtgttgtgataccgtgctccttcactacggataatgacttcaga
ccccaaactgcagtttggtacaaatgtgacgcagctagaccaaattgtggtgaggcagac
gtgatattccactccaacgtgtacaacagatatgttcagccagggtttaagggacgagtg
ctgctgctggagtctagagtttggtggaaaaactgcagcatcatcatcaatgacctgaag
gagtccgactctggatcatatcaattcagagttaaaggttacctgcatggaagggcatcc
ggattttccttttctccgagagcaactgtctctgttaaaggcctgagtcagaagcccacg
gtggcgattcctccgctgacagcgggacggccggccacactgacatgcactgctcccggc
ctctgctttggatctgaaccctccattggctggacgtggagaggagcgggagagaggggc
tcgcacatcacaggaaacattaccgcactcagggctgagagtctggtcgctttcgcgcgg
agacacagctcgactctgacctttaacccttcagctgaacaccatggcaccaatatcacc
tgtgaggtcaccttcgcaggacaggtgaccacagaggaaacggcgactctgattgtgacc
tatgtgaaggaagttagaatctcacagagtacaagtgtgaaggagggtgagactctgaat
ctgacgtgcagtgtcgaaagtttccctccgtcgctcatcgcctggaccaaactttcggac
caaaacggaacaggaaggaatctgcagaacgacacactgactgacctgcgcaatgacact
gaacgccacccacaggaaaagggtggaacggccactctttacatccccaacgtggcggca
gaggattctggacagtacatctgcacagtgcaacatctgaacaacacctggacgggaaat
gtcaatgtgacagtgatttatgtgagagagcctgtgatcaccgggcatacggccgtcaat
cggggggacgatctgcatctgacctgcagcgtcgacagtttccccccgtccctcgtcaag
tggacaaaactcggctccagcacgaacctgcacagcggaagtgacatgcgcaacgacact
ggctcagccacactcatcatcccgaacgtggcaacaggccattctgggcgttacatctgt
gcagcagaacatctgtacaaggctgtgactgtatatgctgatgtgacggtgacttggttt
tccaacatcttaaaaaactctggatgcggggtccagtcggaggtcctgacctgtgtgtgt
gtcagcgaggggtttcctttacccgccatcgaatggccgctgttgaagaacaacactgaa
tactcaatcataaccactgtgtccaaccacaccgtcaacagcaccgtcgtcctaactgta
aaaggccgccccaacacgtccgtcgagtgtgtcagcagtaatataaatggggaagcaaga
gaaaacctcaccatcggattgaccccgtctggacacctaggtgaaggtccatccccaaaa
atgtcacaaaatgtgtcatggctgggaaccttcatcgcctttttcatcggtgctattctc
tcagcagtcatttgctttttggcaaaaacatgccacagaaaaaaacagggggcccctggt
aatctggacgagactctggagatggtgacgggtcaagaggatacgttgatgcatgacggt
caagcagcaacgggtgatcagacccacggccgggggagagctgaagatggaactgtggcg
gtagagaaaagagccccgggccttgacaccgggccagaagacgtgaactacgtcagcatt
gatttctcccggttaaaaagaaagagcggtcgggacgcagccgagaagcaagagaccacc
gagacggtgtacgccgaaatcaaaaaacaagcaaaggaggaaagaggaggtgacggcgga
gcggagggtgagatgctggagggcaaagatgaggaggccatgatagaggaggacgaggag
acaaaacgttgtgtcccacaagaggaggaaggggacgacctggcagtgtactccaatgta
caggatataatggctgccatgtag
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