Scophthalmus maximus (turbot): 118299306
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Entry
118299306 CDS
T09850
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118299306 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118299306 (rsf1a)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
118299306 (rsf1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
Motif
Other DBs
NCBI-GeneID:
118299306
NCBI-ProteinID:
XP_035478795
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All DBs
Position
11:18983161..18998701
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AA seq
1502 aa
AA seq
DB search
MAAPAVARSSGPALCPSFAEVCSFLERYGATLDLPEMTFPQMERYLRDTTTVPKPLVELH
VKLLRKLGRSVTTERWEKYLAKVCQELNSTWAWELEQKGYQDMSMECKSSILKYLCECQF
DDNLKFKMAINEEDPEKMRLLPVGRDRQGLMYWLQLDHEQNIRLYTEEQDDLDGSTWKCI
VRTRNDLSEALELLKAQIEPNQSQERDQNQAETRSASPTEKDKVDEAIGSNNQDSSKTTE
EHAESKKVDPGEEEEKPLKEVVKQEQIKQENSEAEVKEDKADLKTPVFDNRVSTITTIVK
SESRDADAPKNTVSVVMAPGATVIKQEVNKEEEAGRAVVRSNQQAKIPLKKRELKLAESY
QSKHINNNNSSSSSSSSSSSSSSSSIIVCNPSVIQSKDAHGREGKLPNSVAPPDGSAVSQ
QQQQPVVSASRQELTNGRASVLLPHKDGQNGVIGVIGQVGVIGHVGVIRSPSERLRAPGA
ELQEPNGASLDPWSSRALEEEREGSRQSVLVRKGPVERETAAAAAAGLPPHVAKEAQTAA
KLLMPSKSDQPTEASSERKVDAVISLLSPVTEEPKRQKAEDLGKETTEEPLEKGTKTGHG
SCQQKDDDDVDEKDGKTRDVSVAEEGSQNDQEKNKSTLGKVQVESTGPAPPLKVDQREEN
DHQGEGVNGELGAQVRVKDTGLKSEVRQCPLEEASSELQKEGIRLKIKIPPHRRNKLKGK
GGKEEEKEREQDAQDAQEEGRTLRRSARICRPSSKVAESQRKKQQKKQALPSSTREGEEE
EDEEEDEDEEEQSSTTKKDRKAEPVGQIRKQRGKRRHRRARWSNIRSKRRKLNEGAELED
RGRKRGEGEDEEESEGGSDSEDSCKSEEIPSEDACSQCGLPNHPELILLCDSCDSGFHTA
CLRPPLMLIPDGEWFCPPCQHKLLCEKLEEQLQNLDSALKKRERAERRRERLVYVGISVE
NIIPEGDVEEEEKTAKKKDTKKSKNLGRRSTRTRKHISYRFDDFDDAIDEAIEEDIRDLC
GGTGQGKDVTPVLPEDGKESQRPIRSQAHSARSRKKRRLNDLESDSTAAESEDEFMLSNS
SEDEDCVATGADEEEEEEDAGSDVGSWDGGTRPKRAMKVVPKHRPSKTQRRGRKRQRRRR
RRSSEEEEEETEEEIDSDQYSDMTDSDADKKRRGLRRGQRQQVNYRETSESSDNSRASAA
NKKKVRPRGRPRKEHLSSDYSDVSPSSSKDSEEEDDYEEEDDQRRRGHKRRREEEDPRRN
RMRVKERRRRDEEDDDRERGRRLKRKLSEKEDEDKRRRLKRTSREEEDLEKMGRGKRREI
LSQQRRKRLAQMLKKRRPSTDEDDSEESEESESSSEEDRPVRKRLNRIDSDDDDDDEEEE
EDDDDEEEEEEGRQKVTTKKSSAAERRADSDAQEKGRGRSLSPSNRHRTSRGPAKPGDGS
PAEPRDSAGSDRQDSRNGPFHAEEEENEEGEENKREDDEEEEEEEEEGQTDSLNSVQNSP
QS
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggcggtggcgagaagctccggcccggcgctctgcccgagcttcgcggag
gtctgctcgttcctggagcgatacggagcgacgctggatctgcccgagatgacctttccg
cagatggagaggtatctgcgggacacgacgacagtccctaaaccccttgtggagctccat
gtgaagctgctcagaaaactgggcaggtctgttactacagagcgctgggaaaaatacctg
gctaaggtttgccaggagttgaacagtacctgggcatgggagctggaacaaaagggctac
caggacatgtcaatggagtgcaagtcaagcatcctcaaatatctctgcgagtgtcagttt
gatgacaacctgaagttcaagatggcgatcaatgaggaggacccggagaagatgcgcctg
ctgcccgtaggccgggaccggcagggtctgatgtactggctccagctggaccacgagcag
aacatcaggctgtacacggaggagcaggacgatcttgacggatccacctggaagtgcatc
gtcagaactcgtaacgacctgtctgaggctctggagctgttgaaggctcagattgagcca
aaccagagtcaggagcgggaccagaaccaggctgaaaccaggagcgccagccccacggag
aaagataaagtggatgaggccattggaagcaacaaccaagactcgtccaagaccacagag
gaacacgctgagagtaagaaggttgatcctggagaggaagaagagaaacccctaaaagaa
gtggtgaagcaggagcagatcaagcaggagaactcagaggccgaggtgaaagaagataag
gcggacctcaaaaccccggtgttcgataaccgcgtgagcacgatcaccacaatcgtcaaa
tcagaatccagggacgctgacgcccccaaaaacactgtgtcggtagtcatggcgccgggc
gcgactgtgataaaacaggaagtgaacaaggaagaggaagcggggcgggcagtcgtcagg
agcaaccagcaggcaaagataccactgaagaagagggagcttaagcttgcagagagttac
cagagcaaacacattaacaacaacaatagcagcagcagcagcagcagcagcagcagcagc
agcagcagcagcagtattattgtgtgtaacccttcagttatccagagcaaggacgctcat
ggaagagaagggaagttacctaattcagtagcaccccctgatggttcggctgtgtcacaa
caacagcagcagcccgtcgtcagtgcgtcgaggcaagaactgacaaatgggagagcatct
gtcctcctgcctcacaaagatggacagaatggagtcataggggtcataggtcaagttggt
gttataggtcacgtaggggtcatccgcagcccgtctgagcgcctccgggcccctggtgct
gagctgcaggaaccaaacggggcaagtttagacccctggagctccagagctttggaggaa
gagagggaggggagccggcagtcagtgctggtgaggaagggacccgttgaacgggagacg
gcagcggcagcagctgcaggtcttcctcctcacgtggcgaaggaggctcaaacagctgca
aagctgttgatgccctcaaaatctgatcaacccactgaggcctcctccgagagaaaagtg
gatgctgtgatttccttgctgtctccggtcacagaggaacccaagaggcaaaaggcagaa
gacctgggcaaagaaaccactgaggaaccattggagaaggggacaaaaactggacacggc
agttgtcaacagaaggatgacgatgatgtggatgagaaggacggaaagacaagagatgtg
tctgtggcagaagaaggcagtcagaatgaccaagaaaaaaataaaagcactttagggaaa
gtgcaagtagagtcaaccggccccgctccacctctaaaagtagaccagagagaggaaaat
gaccaccagggagagggggtcaatggtgagctgggagcccaggtcagggtgaaggacact
gggcttaaatcagaggtgaggcaatgtcccttggaggaagcctcctctgagctccaaaaa
gagggaatcaggctgaagataaagattcctccccacaggagaaacaagttaaaggggaaa
ggagggaaagaggaggagaaagagagggaacaagatgcccaagatgcccaagaggaaggg
aggacgctgaggagatctgctaggatttgcaggccgagctccaaggtggcagagagccag
agaaagaaacagcaaaagaaacaggcactgccgtccagtacaagggaaggagaggaagag
gaggacgaagaagaggatgaggacgaagaggagcagagctcgactaccaagaaagacaga
aaagcagaacccgtcgggcaaatcaggaaacaaaggggtaaacggaggcaccgtcgcgct
cgatggtccaacattcgctcgaaaagacgtaaactgaacgagggagcggagctggaggac
agagggaggaaacgaggagagggggaggatgaggaggagagcgagggagggagcgactcg
gaagactcctgtaaatcagaggagattcccagtgaggatgcctgctcccagtgtggcctg
cccaaccaccctgaactgattctgctgtgtgactcttgtgacagtggtttccacactgcc
tgcctgcggccgccactcatgttgattcctgatggagagtggttctgtccgccctgccaa
cataagctgttgtgtgagaaactggaggagcagctgcagaatctggacagtgctctcaag
aaaagagagagagcggagagaaggagggagcggctggtgtatgtgggaatcagcgtggag
aacattattcctgagggagatgtggaggaggaggagaagacggcaaagaagaaagataca
aagaagagtaaaaatctgggaaggagatcgaccagaaccaggaaacacatcagctacagg
ttcgatgactttgacgacgcaattgatgaggccatagaggaggacatcagagatctctgt
ggtggaactgggcaaggcaaagacgtcactcccgtcctgccagaggatgggaaggagagc
cagcggccaataagaagccaggctcattccgccaggagcaggaagaagcggcggctgaat
gacctggagagtgacagcacggcagcagagagtgaagacgagttcatgctcagcaacagc
tcagaggatgaagattgtgttgcgacaggagcagatgaggaggaggaggaggaagatgcc
ggcagtgacgtcggcagctgggacggtgggactcgccccaagcgggcgatgaaagtggtg
cccaaacaccgacccagcaagacccaacgcaggggcaggaaacgacagaggcggcggcgg
agacgctcttccgaggaagaggaggaagaaactgaggaagaaatagactcggatcagtac
agcgacatgactgacagtgacgctgacaaaaagaggcggggcctgaggcgcggccagcgg
cagcaggtcaactaccgcgagacgtccgagtcgtcggacaactcccgggcctccgccgcc
aacaagaagaaggtcaggccgcggggccggccgcgcaaggagcatctctccagcgactac
agtgatgtgtcgccttcttcctccaaagactcagaggaggaagacgattacgaagaagaa
gatgaccaaagaaggagagggcacaagaggagaagagaggaggaagacccccggagaaac
aggatgagggtaaaggagaggagacgcagagacgaggaggacgacgaccgagagagaggg
aggcggctgaagcggaaactgtcggagaaggaggacgaggacaagcggaggagattaaag
aggacgagcagagaagaggaggacctggagaagatgggcagaggaaagaggagagagata
ctgtcacagcagcggcgcaaacgactcgctcagatgctgaagaagcggcggccttccacg
gacgaggacgactcagaggaatcggaggaatccgagtcgtcatcggaagaggatcgtcca
gtccgcaaaagactcaaccgcatcgactcggatgatgatgatgatgatgaagaagaagaa
gaagacgacgacgacgaggaggaagaggaagagggaagacagaaggtgacgaccaaaaag
tcttcagcagccgagaggagggccgacagcgacgctcaggaaaagggaaggggccgcagc
ctgtctccatcaaacagacatcggacctccagaggcccggcgaagcctggggatgggagt
cctgcggagcccagggacagtgcaggatccgacaggcaggacagtcgcaacggccccttc
catgcagaagaggaggaaaatgaggagggggaggaaaataagagggaggatgatgaggag
gaggaggaggaggaggaggagggccagacagactcattaaactctgtccagaacagtccg
cagtcatga
DBGET
integrated database retrieval system