Scophthalmus maximus (turbot): 118299310
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Entry
118299310 CDS
T09850
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118299310 (vps53)
Membrane trafficking [BR:
smau04131
]
Protein recycling
Others
EARP complex
118299310 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
118299310 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
hAT-like_RNase-H
Syndetin_C
COG3_N
APG6_N
FUSC
COG5_N
Snf7
MCPsignal
Tropomyosin
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
118299310
NCBI-ProteinID:
XP_035478806
LinkDB
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Position
11:complement(15439195..15461686)
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AA seq
833 aa
AA seq
DB search
MTMMEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSL
ANIDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKA
EKSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLL
QGVVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRTGGPSNVL
RDACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDY
EEKYGRMFPEEWCMTERIAVEFCHITKVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLL
AKRFTGCTLTDAPGQKRKESPLHSTNPFLEDEPGEDVGTEKDENLAKPRKPKAPDNPFHG
IVSKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYK
KCMVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTISSLLKEKEGS
DAAKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLMERINLTGEMDTFSTVIS
NSIQLLVQDLDAACDPALSAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLAST
RKYFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLR
KAPASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLK
RSEQSSMLELFRQRLPTPPSGADGGPSLSFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgatggaggaggaagaatttgaattcgctgaggatttggaggctattttgcat
ctaaccccggaggtgcaactggccatcgagcaggttttcccgagccaagacccactggac
agagcagacttcaacgccgtggagtacatcaacacactgttccccaccgagcagtctctg
gctaatattgatgatgtggtaaacaagattcgtctgaagattcggcgtctggatgataat
atcaggacggtggtgaggggccagaccaatgtgggccaggatggtagacaggcattggag
gaggcccagaaagccatccaacaactctttggcaaaatcaaagacatcaaggacaaggca
gaaaagtctgaacaaatggttaaggagattacgagggacataaagcagttggaccatgcc
aagcgccacctaactacatccatcaccaccctcaaccacctgcatatgctggcggggggt
gtggactctttagaagccatgaccaggaaaaggcagtatggtgaggtggccaacttgcta
cagggagtggtcaatgtgctggaacatttccacaagtacatgggcattccacagatcaga
caactttctgagagagtgaaagcagcacagagtgagttggggacgcagatcctggcagat
tttgaagaggccttcccctctcagggctccaagagaacaggtgggcccagtaatgtgctg
agagacgcctgtctggtggccaatgtgctggacccacgcatcaaacaggagatcatcaaa
aagttcatccggcagcacctctcagagtacctggtgctcttccaggaaaaccaagatgtt
gcttggctggacaagatcgaccgccgctatgcctggatcaaacggcagctggtggactat
gaggagaaatatggacgcatgtttcctgaggaatggtgcatgacggagcgtattgccgtg
gagttctgccacatcacaaaggtggagctagccaaagtgatgcgaacacgggctaaggag
attgaggtgaagctgcttctgtttgccattcagaggacgacaaactttgagggtttactg
gccaaacgcttcacaggatgcaccttgactgacgcacctggacaaaagaggaaagaaagc
cctctacactcaactaaccctttcctggaggacgaaccgggtgaggatgtgggcacggag
aaggatgagaatctggcaaagcccaggaagcccaaagctccggacaaccctttccatggc
atcgtctccaagtgttttgaacctcatctatacgtctacatagaatcccaggacaagaac
cttggtgaactgattgaccgatttgtggccgacttccgagcacaaggcccaccaaaggcg
ggcacggaggagggcggagcagtcctgcccagctgcgctgacctctttgtctattacaag
aagtgtatggtgcagtgctcacagctgagcactggagaaccaatgatcgcgctcacgact
atcttccagaaattcctgagggagtacgcttggaagatcctctctggaaacctgcccaag
tcgagcagtaacagcgggggtctgaccatcagcagtctgctgaaggagaaagagggctca
gatgctgcaaagttcaccgtggatgagctctgtctgatctgtagcatcctcagcactgcg
gagtactgtttggctaccacacaacagttggaagagaagctaaaggagaaagtagataaa
gttttgatggagagaattaatttgaccggagagatggatacattcagcactgtgatctca
aacagtattcagctactcgttcaagatctagatgctgcctgtgaccccgctctctctgct
atgagcaagatgccgtggcagagcgtcgagcacgtgggtgaccagagtccgtatgtgacg
tcaatcatcatgcacattaaacagaatgtgccaatcatccgagacaatctggcctccacc
cgcaaatacttcacacagttctgcatcaagttcacaaattcattcatccccaaatttatc
aaccacctgttcagatgtaaacctatcagcatggtgggagctgaacaactcctccttgac
acccactccctgaagacagtcttgctggatctgccctccataggctcccaggtgcttcgc
aaggcacctgccagttacaccaagatagttgtgaaaggcatgacccgtgcagagatgata
cttaaggtggtgatggccccacatgaaccaccggtggtgtttgttgacaactacatcaag
ctcctggctgatggtaaccctgagaccttccagaagattctggacatgaagggtctgaag
cgcagtgagcagagcagcatgctggagctcttcaggcagaggcttcccactccgccctcc
ggggctgacggaggcccctctctgtccttcagcgcccccacccctgagcaggagtcctcc
cgcatccgtaaactagagaaactcatcaagaagagactgtga
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