Scophthalmus maximus (turbot): 118299446
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Entry
118299446 CDS
T09850
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118299446 (ddx4)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118299446 (ddx4)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118299446 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118299446
NCBI-ProteinID:
XP_035479090
LinkDB
All DBs
Position
1:24902715..24911079
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AA seq
652 aa
AA seq
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MGVDGGDSHTLPPTGQPLLRKMDDWQETEPSSGPVTNTSHAASEGNSWNSDGGEFGKSRF
GRGRGGRGGSFSSGGDENGSDNDSWKNTGGESGGFRGRGRGRGRGFGRSDTTGDDDGDRE
NGFRGRRGNRGGGFRQGDQGGRGGFGGGYRGKEEDIFAQGDDSGEKDASEAERPRVTYVP
PSLAEDEDSVFAHYEKGINFDKYDDIMVDISGTNPPEAIVTFDEAKLCESLRKNITKSGY
AKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQLMAEGVAASRFSELQEPEA
IIVAPTRELICQIYLEARKFAFGTCVRPVVVYGGVSTGHQMREIERGCNLLCGTPGRLLD
MIGRGKVGLQKVRYFVLDEADRMLDMGFEPDMRRVVGSPGMPSKENRQTLMFSATYPEDI
QRMAADFLKTDYLFLAVGVVGGACSDVEQTFVEVTKFSKKEQLLDLLKTTGTERTMVFVE
TKRQADFIATLMCQENVPSTSIHGDREQRERELALMDFRSGKCPVLIATSVAARGLDIPD
VQHVVNFDLPNNIDEYVHRIGRTGRCGNTGRAVSFFDPDADGQLAQSLVTILSKAQQVVP
PWLEEYAFSGPSSSDVKSSFASTDSRKGGSFQDNTVKRQVAAAPAADEEEWE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgatggtggagactcccacacactgccacccactggccagccgctgttaaga
aaaatggacgattggcaagaaacggaaccttcttcaggtcctgtaacaaataccagccat
gccgcaagtgaaggaaactcctggaactctgatggtggtgaatttggaaagagccgcttt
ggaagaggcagaggcggacgaggaggctccttctcctcaggtggtgatgagaatgggagt
gataacgacagctggaaaaatacaggaggagagagtggtggtttccgcggtagaggaaga
gggcgtggccgggggtttggcagaagtgatacaactggagatgatgatggagatcgtgaa
aatgggttcagaggcagaagaggcaaccgaggaggagggttcagacaaggtgaccagggt
ggcagaggaggctttggtggaggttaccgtggaaaagaagaggacatctttgctcaagga
gatgattcaggagagaaggatgccagtgaggctgagaggccacgggtcacttatgttcca
ccaagccttgctgaggatgaagactcagtctttgcccactatgagaagggcatcaacttt
gacaagtatgatgacatcatggtggacatcagtggaaccaacccaccagaggccatcgtg
acctttgacgaggccaaattgtgcgagtccctgagaaaaaacatcaccaaatccggttat
gcgaagccgacccctgtgcagaagcacggtataccaatcatctctgctggcagagatctc
atggcctgtgcccagactggatccggtaaaacggctgcattcctgctccccatcctgcag
cagctgatggcagaaggagtagcagccagtcgcttcagtgagctgcaggagcctgaagcc
atcattgtggccccgaccagggagctcatctgccagatctacctggaagcaaggaagttt
gcctttgggacatgtgtgcgtccagtggtggtttatggtggcgtcagcactggacaccaa
atgagagaaatagaaaggggatgcaatttactgtgtggaacaccagggaggctgttggac
atgattggaagaggaaaggtcgggttgcagaaggtgcgctactttgtgctggatgaggcc
gaccgcatgttggatatgggctttgagccggacatgcgccgcgtggtgggctcccctgga
atgccatccaaagaaaaccgtcagaccctgatgttcagtgccacctaccctgaggacatc
cagaggatggctgctgacttcctcaagacggactatttgttcttagctgtgggcgtggtg
ggcggagcctgcagtgatgtagagcagacatttgttgaagttactaagttctccaagaag
gagcagctccttgacctcctgaaaaccacaggaacagaacgcaccatggtgtttgtggag
accaagagacaggctgattttattgccacgttgatgtgccaggagaacgttccatctacc
agcattcacggtgaccgtgagcagcgggagcgagagctggccctgatggacttccgctct
ggtaaatgtccagtcctgatcgcaacctctgtggctgcccggggcctggatattccagat
gtgcagcatgtggtgaactttgacctccccaacaacattgacgaatacgttcaccgcatt
gggagaactggccgctgtggcaatactgggagggcggtgtctttctttgacccggatgca
gatggccagttggctcagtccttggtcacaatcctgtctaaggcccagcaggttgtgccc
ccgtggttagaggagtatgcgttcagtggccccagtagctcagatgtcaaatcctccttt
gcctccacagactccaggaagggagggtcctttcaggacaacactgtgaagagacaggtg
gcagctgcgcctgcagccgatgaagaagaatgggaatag
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