Scophthalmus maximus (turbot): 118299469
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Entry
118299469 CDS
T09850
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118299469 (robo1)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
ROBO family
118299469 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
118299469
NCBI-ProteinID:
XP_035479145
LinkDB
All DBs
Position
11:8981693..9259712
Genome browser
AA seq
1694 aa
AA seq
DB search
MPGAWSGVTTLFIMALLRLAQGQELPSVPEIGVAQDGASDETTPAPTTEHEDDNSLGYTG
SRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSQ
RMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPAD
VIVAAGEPAVLECQPPRGHPEPTISWKKDGVNIDDRDERITIRGGKLMITNARKSDAGKY
VCVGTNMVGERESEVAELTVLERPSFVRRPGSQVVLVDQSVEFRCEARGDPVPTVRWRKD
DGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVAENLVGKAEASATLTVHVVSVPPAFVV
RPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRFSVSQTGDLTI
TDAERSDMGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVIRQGPTNQTVAVDGTVVLN
CMASSNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTCIASTPSGEAS
WKAYLEVQEFGVPVQPNRPTDPNLIPSAPSKPEVTDVTRTSITLSWKPNLNAGATPTSYI
IEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPITDAVKTQ
DIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSP
EGLQRSEWAVFEVRTMGEDSAVVPQLRKGVTYEFKVRPFFNEFQGTDSDVKIGKTLEEAP
SAPPREVTVMESGDNGTAIVVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGSTL
SVLIPSLAPGIRYSVEVAASTGAGPGVRSDITFFQLDASGRMTETEAPENPLSQQISEVV
KQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLPSSYAGIRKVPSFTFTPTVAYQRGGE
GVSSAGRPGLLNIGESATQPWLADTWPNSCSNHKDCSINCCTAGNGNSDSNLATYSRPAD
CIANYNNQMENKQTNLMVPESGVYGDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYA
TTQLIQSAIMGNNINSERGTGGSGGGPGGGGEVNEKHCWKPPQCQQQKQEMGSQLQYIIM
EQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRGSSSTSGSQGHKKGMRTPKL
PKQSTMNWADLLPPPPANPPPSRSAEEYSLPMEESCDPDMQCPMPPSHMYLQPDELEEEE
EMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDAPDGHERRRHAVSPPP
RPLSPSHTYGYITSPLALDTDGMEEEDILEEEEDEGDDTDAEVAKMHYHHTHPHTHPHHT
QMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSSGRSSAVSSSDGSFF
TDADFAQAVAAAAEYSGLRVAKYPNTQGQEVGGASARKYQINQSGHRPGSPVSTDSNMSM
AAVHRRPPKKQKQHPAGHPAGLPGNQRREPYNEDLPPPPIPPPAVLKSPTHPSKAALEGR
GVISPKAGEGRDRRGGTGGCRPREGSDPRTNSSERKDAQERQKTSHGEKGNRHEGSTASK
ARQYAGSEDILPYSRPQFPTVNCPRDPSSSSSMSSRGSGGRRRGEGGRRNPADMGLITAG
ALQPGDEELEMVQS
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgcgtggtcaggggtcacaaccctcttcataatggccctgctcaggttggcc
cagggccaagagctcccttcagtcccagagattggagtcgctcaggacggggccagcgac
gagacaacaccagctcccaccactgaacatgaggatgacaactctttgggctacacagga
tcccgtctgcgccaagaggacaccccacctaggattgtggagcacccctctgacctgatt
gtatccaaaggggagccggccactctcaactgtaaggcagaggggcggcccaccccaaca
gtggagtggtacaaggatggcgagcgagtggaaacggacagggacaatccccgttctcag
cgcatgctgctgcccagtggctccctcttcttcttgcgcatcgtccacggaagaaggagc
aaaccggacgaaggttcctatgtctgcgttgcccgcaactacctgggagaggcggtgagc
cacaatgcctcactggaagtagcgatcctacgagatgacttcagacaaaatcctgcagat
gtgattgtggcagcaggagaaccagcagtcctggagtgtcaacctccacgtggacatcct
gaacccaccatatcatggaaaaaagatggagtaaacattgatgaccgagatgagaggatc
actatacgtggagggaagctgatgatcacaaacgcccggaagagtgatgctgggaagtat
gtgtgtgtcggcacgaacatggttggagaacgtgaaagtgaagtagctgaacttacagtg
ctagagcgccccagttttgttcgtcgcccaggtagccaggtggtgttagtggaccaaagt
gtagagttcaggtgtgaggcccgcggtgacccagttcccaccgtgcgctggaggaaagac
gatggtgacctgcccaaaggaagatatgagatccgtgaggaccacaccctgaagatccgt
cgcctgacctcggctgatgtgggctcctacacctgtgtggcagagaacttggtgggcaag
gcggaggcatcggccacgctcaccgtccacgtcgtgtctgtgcccccggcatttgtggtg
agaccaaggaaccaggtggttggggttggcagaaccgtcactttccagtgtgaggccact
ggaaacccgcagccagccattttctggcagcgggaaggcagtcagaacctgctattctcc
taccagcctcctcaaccctccagcagattttctgtgtctcagactggggatctgactatc
actgatgccgaacgctcagacatgggatactacagctgccaggccctcaacatcgctggc
agtgtcataaccaaggctctgctagaggtcactgatgtggtgtcagaccgcccgccgcca
gttatccgacaaggcccgaccaatcagacggtggctgtggatggcacagtggtcctcaac
tgtatggcatcgagtaaccccacccctaccatcctctggaggaaggatggtgtattggtg
tccactcatgactccagggtcaaacagctggacacaggtgcactgcagatacgctatgca
aagcttggtgacactggcacctacacctgcatcgcctccacacccagcggagaggcctca
tggaaagcctatttagaggttcaagagttcggagtcccagtccagccaaacagacccact
gacccaaacctgatccccagtgccccttccaaacctgaggtcactgacgttacccgcacc
tccatcaccctttcctggaagcctaaccttaatgctggagccacacccacctcctatata
atagaggccttcagtcatgcatcagggagcagctggcagaccttggcagagcatgtgaaa
actgagtcatttgtactgaagggcttgaagcccagcgcagtctacctcttcttagtacgg
gcagccaatgcctatgggctgagtgatcccagtcccatcactgatgctgtgaaaacacaa
gatatccctcccaccagccagggtgtggaccatcgtcagatccaaagggagctgggagaa
gtggtgatccacctgcacaaccccaccatcctctcctcctcatctgtcagggtgcagtgg
acagtggagcagcagtctcagtacatacagggctacaaggtgatgtacaggccttcaccg
gaggggctgcagcggagcgaatgggctgtgttcgaggtgcgcaccatgggggaggacagc
gctgttgtgccgcagcttcggaagggcgtcacatatgaattcaaagtccgccccttcttc
aatgaattccagggaacagacagtgatgtcaaaattggcaagacgctggaggaagccccc
agtgcccctcctcgtgaggttacagtgatggagagtggggacaatgggactgccatcgtg
gtctcctggcaaccccctccagaagaggaacaaaatggggtggtccaggagtacaagatt
tggtgtttggggaacgagagcaggtaccacatcaaccgtaccgttgacggctcaaccttg
tcagtgctgattcccagtctggccccggggatccgctacagtgtggaggtagcagccagc
accggggcaggtcctggggtcaggagcgatatcaccttcttccagcttgatgcatctgga
cggatgacagagaccgaggccccagagaaccccctgtcccagcagatctcagaagtggtc
aagcagccagcctttatagcaggcataggagctgcttgctggatcatcctcatggtcttc
agtatctggttgtacagacaccgcaagaaacggaatggcctccccagcagctatgcaggc
atacgcaaagtgccctcctttactttcacaccaacagtggcatatcagagaggtggagaa
ggtgtgagcagcgcgggaaggcctggtttgctaaacattggggaatcggccactcaaccc
tggctggctgacacatggcccaactcctgctccaaccacaaggactgcagcatcaactgc
tgcacagctggcaatggcaacagtgacagtaacttggcgacctacagccgaccagccgac
tgcatcgccaattataacaaccagatggaaaacaagcagaccaacctcatggtgccagag
tcgggagtctatggagacgttgacctgtccaacaagatcaatgagatgaagaccttcaac
agccccaacctcaaagacggacgctttgtgggcccggggggccagccgacaccttacgcc
accacccagctcatccagtccgccatcatgggcaacaatataaactcagaaagaggaacc
ggaggcagtggaggtggacccgggggcggaggggaggtgaacgagaaacactgctggaag
cccccccaatgccagcagcagaaacaggaaatgggctcccagctgcagtacatcatcatg
gaacaaaacaagctgaacaaggaccgctacagaggaggtgacagtcctatgccagccacc
atcccctacaaccagacccatgacagccacactgggggctcctataacagctctgaccga
ggcagcagtagcacctccggaagtcagggccataagaagggaatgcgcacccccaaacta
cccaaacagagcacaatgaattgggctgacctgctgccccctcccccggcaaacccaccc
ccgagtcggagcgcagaggagtactctctaccaatggaagaaagctgtgacccagacatg
cagtgcccaatgcccccctctcacatgtacctgcagcctgatgagctggaggaggaagag
gagatggagaggggcccaactcctcccatccgaggggcagcatcttcccctgctgctgta
tcttacagtcaccagtccacagccactctcactccttcaccccaggaagagatgcagcca
atgctccaggacgcacctgacggccatgaacgcagacgccatgctgtgagccccccgccg
agacccctttctccttcacacacatatgggtacatcactagcccactggccttggacacg
gacggtatggaggaggaggacatattggaggaagaggaggacgagggtgacgacacagat
gcggaggtggccaagatgcactaccaccacacccacccccacacgcaccctcaccatacc
caaatgcatccgcgacggttgcttctacgagggcttgaacagacgcctgcgtccagcatg
ggggacctagagagctcagtgactggctccatgatcaacggatgggggtcggcctctgaa
gaggataatgtctcttcgggcaggtcaagtgcagtcagctcgtcagacggatccttcttt
actgatgctgactttgctcaagcggttgctgcagccgcagagtattcaggcctcagggtt
gccaagtaccccaatacgcaaggccaggaggtcggaggagcttcagcacgaaaataccaa
ataaaccagtcaggccaccgtccaggcagcccggtgtctacagacagtaacatgagtatg
gcagctgtacacaggaggcctcctaaaaagcagaaacagcatcccgcaggccatcctgca
ggccttccagggaaccagcgccgcgaaccatataatgaagatctcccccctccgcccatc
ccgcctccagcggtgctcaagtcccccacgcatccctccaaggcagcgctggagggtcgg
ggagtgatttcccccaaagcgggagagggtcgagacaggagaggaggaacggggggatgt
aggccccgagaaggctcggaccccagaaccaactcctctgaacgcaaggatgctcaggag
agacaaaagacttctcatggagagaaagggaataggcatgaggggagcactgccagcaag
gcacgccaatatgcaggctcggaggacattctgccctatagccgaccacagttccccaca
gtcaactgccccagagacccgagctcctccagctccatgtcctctagaggatcggggggt
cggcggagaggagagggagggcgcaggaacccagcagacatgggcctcatcaccgcgggg
gccttacaaccaggagatgaagagctagagatggtacaaagctga
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integrated database retrieval system
