Scophthalmus maximus (turbot): 118299548
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Entry
118299548 CDS
T09850
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118299548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118299548
Transporters [BR:
smau02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118299548
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
118299548
NCBI-ProteinID:
XP_035479254
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Position
11:21637862..21646897
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AA seq
583 aa
AA seq
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MNKKRPTENKQEGVEERGHWGSKVEFLLAVAGNVVGLGNVWRFPYLCYKNGGGAFLVPYV
VFVVTCGVPLFLLETTIGQYTQEGGITCWRKLCPLAEGIGYGGQLILLYSCMTYILILSW
ALFYLVFSFSSQLPWASCDNDWNTDACVDFSSRNKSIQWTNQTNSSSAATEFWERRVLAI
SGGIEQIGSVRWEVLLCVIAMWVTCYFCVWKGVRSTGKVVYFTATFPYAMLVVLLIRGLS
LPGALQGVLFYLLPEPSRLTDPQVWMEAGAQIFFSYSIGVGSLTVLGSYNTYNNNCYRDC
LWLCLLNSGTSVVAGFAVFSVLGFMAHEQGIPISEVAESGPGLAFIAYPQAVAMMPLPQV
WSICFFVMLILLGLDTQFVAMEVVMTSITDMFPAVMRRAGRRERFLLLFCLTCFFCQLVM
ITEGGMYVFQMFDYYACNGACILFLCVFETLALGWVFGVERLYGIIKDMTGVSANPFFKV
CWLYLTPLVSLGSFIFSLVEYQPLTFNRWYVYPDWAYVLGWLLALSSILLVPGWALYKLG
TGTGSLRQRVRELCRPDHDFQLTRGKEAELQLVGGEDTKCFTG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaaggccaacggaaaacaagcaggaaggagtggaggagcgaggacactgg
ggcagcaaggtggagtttctactggccgtggcgggaaacgttgtcggcctgggcaacgtg
tggaggttcccttacctctgctacaaaaatggaggaggtgcgttcctggtgccctatgtg
gtctttgtggtgacctgtggtgtacccctgttcctgctggagaccaccatcggccagtac
acccaggagggcggcatcacctgctggaggaagctgtgtccactggcagaaggaatcggc
tacggcggacagctgatcctcctctacagctgcatgacctacatcctcatcctgtcctgg
gccttgttctacctggtgttctccttcagctcccagctgccctgggccagctgcgacaac
gactggaacacagatgcctgcgtagacttctcatcgagaaacaagagcatccagtggacc
aaccagaccaactcgtcctctgccgccacagaattctgggaacgacgagtgctggctatc
tccggggggatcgagcagatcggcagcgtccggtgggaggtgctgctctgtgtcattgcc
atgtgggtcacctgctacttctgcgtctggaaaggagtcagatccacaggaaaggtggtc
tatttcactgccaccttcccctacgcgatgctggtggtcctcctgatccgtggcctgtct
cttcccggcgccctacaaggagtcctgttctatctgctgcccgaaccctcgcgactcaca
gaccctcaggtgtggatggaggccggggctcagatcttcttctcgtacagtatcggcgtg
ggctccttgacggtgctcggcagctacaacacctacaacaacaactgctacagagactgt
ctgtggctgtgtttgctgaacagcggcaccagcgtggtcgccggcttcgcggtcttctca
gtgctggggttcatggcccacgagcaaggcattcccatttcagaggtggccgagtcaggt
cctggtctggccttcatcgcgtaccctcaggccgtggccatgatgcctctgcctcaagtg
tggtccatctgtttctttgtcatgctcattctcttgggcctggacacacaattcgttgct
atggaggtggtgatgacatccatcacggacatgtttcctgccgtgatgcgccgagcgggc
cggcgggaacgtttcctcctcctcttctgcctcacgtgcttcttttgtcagcttgtcatg
atcaccgagggagggatgtacgtgttccagatgtttgactactacgcttgtaacggagcc
tgcatcctcttcctctgtgtgtttgaaaccctggcactgggatgggtcttcggggtcgag
cggttgtacggcatcatcaaggacatgacgggggtcagcgccaaccccttcttcaaagtc
tgctggctctacctcacaccgctcgtctcactgggctcttttatattttctttagtggag
taccagcccctgaccttcaaccgctggtacgtgtacccggactgggcctacgtgctgggc
tggctgcttgccctgtcctccatcctgctcgtgccgggctgggctctgtacaagctggga
accgggaccggaagcctccgtcagcgtgtccgtgagctgtgtcggcccgaccacgacttc
cagctgaccagagggaaagaagccgagctgcagctcgtcggaggggaagatacgaagtgt
ttcacagggtga
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