Scophthalmus maximus (turbot): 118299677
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Entry
118299677 CDS
T09850
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118299677 (npas1)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118299677 (npas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
118299677
NCBI-ProteinID:
XP_035479478
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All DBs
Position
11:13344379..13404493
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AA seq
810 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFANQGDPPWNPLMEGDSNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTAPESASSSASASSLAGTPEPAPSSPHSPADEPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPLGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSNATVSINHKAPHERNIIWVNYVLSRTELPDTPL
DLLQLPEGVRAERLRVSASPANSSPQGRGSQSAKGSAGKSDPDTKGREKFTAATIQSEDR
RKRLLRSDPEGAPPENRRRLEELRHVEESVSASSDLASESEGEEDEEMEWDQGGDSDRLK
LEDGGGKQSREGDTPTRGERGGRAHNGRAVIQQLKSVVTPSPLSGSPSIKTEHDSLTTGG
RWGSHTQTSTSHNTQHQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSPALS
PAMSVSSPLPREERAVSGVVSRGSGGVGGAGCGPDFELLQRLAAGGAAGRVLFHPLALGP
QGPQSLYAPSTIRYAPPELPPSHHHSAGHSDGLQLRSDHHKGPPPAFFPHLQRLAGLPPF
SGFSPSDSPFSSGLPFCMNGLRGAAGSEED
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccgttcgtcagcgaaggaaagtgtgtgagtgtggaatgggactttcta
caaggactgctggccaagcctcccaccctgccctgcctgcagaacctgcgtaaagagaag
tctcgcaatgcggctcgttcacggcgggggaaggagaatttcgagttctttgagctggct
aagatgttgcctctacctggggccattaccagccaactggacaaggcctcggtcatccgg
ctgaccatcagctacctgcacatgcgcaccttcgccaaccagggggaccctccctggaac
cctctgatggagggtgacagcaactgcagcaaagtgaggcgatcgtcccattctctggcc
actgacatgtttgagcaacatcttggggcgcacctcctgcagtctctggatggctttgtg
ttcgtggtcagtcaggagggacggttcctctacatctcagagacagtttctatctacctg
ggactctcacaggtggagctgaccggcagcagcgtgttcgactatatacacccagcggac
cacgtcgagatggccgagcgactgggaatcaggccgcatctgagggccgaggccggctgc
cacacagctcctgagagcgcctccagctccgcatccgcctcctcgctggctggtacccca
gagcccgctccatccagtcctcactctcctgctgacgaacctcctgatcgcggcttcttt
atccgcatgaagtccacgctcaccaaaagaggcctgcatgtcaagtcttctggatacaag
gtgatccatgtgacagggcgaatacgctgccgtcctgcactggtgccgggctccacgcgg
tcagtgcgtcgtccgctgggtttggtggcactggcgcacacactcccgccctccaccctt
aatgaagtccgcatggagagccagatgttcgtcttccgcgtgaacatggacctacaggtc
acgtattgtgagaacaggatctcagagtacatggatctgaccccagcagaggtggtggga
catacctgttaccactttatccatgtagaagacctagaaaacctgaggcagagccatgag
gacttgctgaggaaaggccaggtagtgacgggttactatcgttggctccagaggagagga
ggctacctgtggatccagtccaatgccactgtctccatcaaccacaaagccccccacgaa
cgcaacatcatctgggtcaactatgtcctgagtcgaacagagttgcccgacactcccctg
gatctactccagctacctgagggcgtacgagcagaaagacttcgagttagcgcctctccc
gctaacagctccccacagggccgtggttcacaatcagcgaagggctcggcggggaagagt
gaccccgacactaaaggaagagagaaattcactgccgctacgatccaatcagaggacagg
aggaagcgccttctgaggtccgacccggagggggctcctcccgaaaaccgtcgcagactg
gaggaactccgtcacgtggaggagagcgtatcagcctcctcagacctggcgagtgaaagt
gagggggaggaggacgaagaaatggagtgggaccaggggggagacagtgaccgattgaaa
ctggaagacggaggaggtaaacagagtagggaaggagacaccccgactagaggggagaga
ggagggagggcacacaacggccgggctgtgatacaacagctgaagagtgtagtgaccccc
tcccccctgtcgggcagccccagcatcaagactgagcatgactccctgaccaccgggggt
cgttgggggtcccacacacaaacctccacctcacacaacacccagcatcagccctcacat
gcacatactccctccagcagtctcaacggcgacagccccaccaccccaatccccgactct
tcttccagcagtgaagcccctccgaaaggtttgttcactcccccatcccctgcgttgtcc
ccggccatgtctgtgtcctccccgctaccccgtgaggagagggctgtgtcaggcgtggtc
agtcggggcagtggtggtgtcggcggtgcaggttgtggtccggactttgaactgctccag
agactggctgcaggcggtgctgcggggcgggtcctctttcacccccttgccctcggacca
cagggccctcagagcctctatgcccccagcactatccgctacgctccacctgagctgcct
ccctcccaccatcacagcgcgggacacagtgacggcctgcagctacgctcagaccaccac
aagggacccccgccagccttcttcccccacctacagcggctggccggcctgccacccttc
agtggtttctccccgtctgacagccctttctcctccggcctgccattctgtatgaatgga
ctgaggggggctgcaggctctgaggaggactga
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