Scophthalmus maximus (turbot): 118299740
Help
Entry
118299740 CDS
T09850
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04137
Mitophagy - animal
smau04140
Autophagy - animal
smau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118299740 (hif1al)
04137 Mitophagy - animal
118299740 (hif1al)
04148 Efferocytosis
118299740 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118299740 (hif1al)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118299740 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_HIF1A
PAS_3
HIF-1
PAS
PAS_9
PAS_4
Sld7_C
Motif
Other DBs
NCBI-GeneID:
118299740
NCBI-ProteinID:
XP_035479601
UniProt:
A0A8D3BCD2
LinkDB
All DBs
Position
11:5270030..5285571
Genome browser
AA seq
694 aa
AA seq
DB search
MEDKDDTVALVGGTQCHLVQVSSWGSSEQRKLRSRDAARCRRGQETEVFYELARTLPLPR
RVSTQLDKAAIMRVVLSFLRMRSLLQDENQKEGPEEEGDDAGAGGKVEEEEEEDPMDAFY
PQTLAGFITVLTEEGDMIYLTENVSRHIGITQLELLGQSVYDFVHPCDQEELRDLLTPRP
GLSMKSQKEQQIGRNFFLRMKSTLTSRGRTVNLKSATWKVLHCTGHMRRFGGSSTSPSAA
TVMTLLCEPIPHPSSVEFPLDTCTFLTRHSMDLRFTHCEGSVTELLGYKPDDLIGRSAYE
FHHVLDSDHVNKSLLTLLAKGQVSTSHYRFLANSGGFVWAETQATVLYSSKTSQPEAVVC
LNFILSAVEQPDVVFSVEQIRCGCLPKAEPHLPAPDCETPDSCDSDGDNLADSSRTEDAC
SKPSRAAELLFNPEEPEELFQLASAAGDAIIPLTGGFVELSFVSPPSPNSVPDHPQDLCT
PQLRQLLTSIFSPVMPPASSSSPASSLDSDSSPCEEEVMDTSEVEKIFAIRSEDRQKERK
KLEHTEGMDLDMLAPYISMDDDFQLTVLSGLPEDADERLSDPSAATPAVTLRRKRAHNPD
EMPSQMMSQDKRQKQAPSSTDEELLLSHGLLDCLEETDQLHLILDPGPGCRSRLLTNRDP
ILGGMQGLCETAALMRDIFIPCPPHLSPPLSPMT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaagacgacaccgtcgcgctcgtgggtggtacacagtgccatctagtccag
gtgtcgtcttggggcagttcggagcagaggaagctgcgctcccgcgatgcagccagatgt
aggcggggtcaggagacggaggtgttttacgagctcgcccgcaccctgccgctcccgcgc
cgggtgtccacccaactggacaaggctgccatcatgagagtcgtcctcagcttcctgcgc
atgcgcagcctcctgcaagatgagaatcagaaagagggccctgaggaggagggggacgac
gccggcgccggcgggaaggtggaggaagaagaggaggaggatccaatggacgctttctat
ccccagacgttggccggtttcatcacggtgttgacggaggaaggagacatgatctacctg
acggaaaatgtcagcagacacatcggcatcacacagctggagctgctgggtcagagtgtt
tatgactttgttcatccctgtgatcaggaggagctccgagaccttttgactccacgtcca
ggtttgagtatgaaatcacagaaagaacagcagatcggaagaaacttctttctccgaatg
aaaagcacgctgaccagcagggggcgcaccgtcaacctcaagtctgccacctggaaggtt
ctccactgtacaggtcatatgcggcgctttggcggcagctcaacgtcgccctctgcagcc
acagtgatgaccctgctgtgtgagcccatcccccatccgtccagcgtggagttccctctg
gacacctgcaccttcctcacccgccacagcatggacctgcgcttcacacactgcgagggc
agtgttacagaattgctgggatacaaacctgacgatctgattggtcgctcagcctacgag
ttccatcacgtgctcgactctgatcacgtcaacaaaagcctgctcacattgctggccaag
ggtcaggtgagcaccagccactaccgtttcctggcaaacagcggtggcttcgtctgggca
gagacccaggcgaccgtcctctacagcagcaagacctcgcagcccgaggccgttgtctgc
ctcaacttcatactcagtgccgtggagcagccagacgtcgttttctctgttgagcagatc
cgttgtggctgcctccctaaagctgagccccacttaccagcgcctgactgtgagacacca
gacagctgtgactctgacggtgacaatctggccgattccagtcggacggaggatgcatgt
tcgaaacccagcagagctgcggagctcctcttcaacccggaggagccggaggagcttttc
cagttggcttctgcggccggggacgccatcattccactgacaggaggttttgtcgagctg
tcgttcgtaagcccacccagtccaaactctgtgccggaccaccctcaggacctgtgcact
ccgcagctacgacagctcctcacatccatcttcagccctgtcatgccaccagcttcatca
tcatcaccagcctcctcacttgattctgattcgagcccctgtgaggaggaggtgatggac
acgagtgaggtggagaagatctttgccattaggtcagaagatcgtcaaaaggaaagaaag
aaactggagcacacggaggggatggatctggacatgttggctccttacatctctatggac
gacgacttccagctgaccgtcctcagcggtttgcccgaggatgccgacgaacgtttgtcc
gatccttcagctgcgactcctgcagtcacactcaggaggaaacgggcccataacccggat
gagatgccgtctcagatgatgagtcaggacaagagacagaaacaagctccttcgtcaaca
gatgaggaacttcttctcagccacggattgctggactgtctggaggaaaccgaccagtta
catctgatccttgacccgggcccagggtgtcggagccggctactcacaaacagagacccc
attttaggaggcatgcagggactttgtgagactgcagctctgatgagggacatattcata
ccttgcccacctcacctgtcaccgcctctctcgcccatgacctga
DBGET
integrated database retrieval system
