Scophthalmus maximus (turbot): 118300129
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Entry
118300129 CDS
T09850
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118300129
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Protocadherins
118300129
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
118300129
NCBI-ProteinID:
XP_035480130
EnsemblRapid:
ENSSMAG00025015790
LinkDB
All DBs
Position
2:complement(12583304..12589119)
Genome browser
AA seq
997 aa
AA seq
DB search
MDTRGREKGPSGKWHAVCRLALFTCFLDAVRGQIRYSIPEELEHGAFVGNIAEDLGLDLD
KLSARRFRIVSGAKKQYVEVNLENGVLFVNERIDREELCEQSLSCSFHLQVVIENPLELY
RVEVEILDVNDNSPAFPWTEFNLDISESAAPGSRFPLESAQDLDVGSNSLRTYLLSVNEH
FLLDIQTRSDGSKFAELVLQSPLDREQQGAHQMVLTAVDGGAPERSGTAQIDITVLDAND
NAPVFDQSFYRVRLAENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRQLFSVDS
RTGEIKVKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNVLDRNDNVPEVILTSVST
PVQEDAPPGTVIAVISVMDKDSGENGNVDCEIPNQVPFQLHSSFKNYYTLVTSDFLDREA
VAEYNITLTARDMGSPPLFTRKTILVQVSDVNDNAPHFKQPSYTVYLTENNAPGASICAV
AAQDPDSGQNAYLSYSIVEGDILGMSVSTYVSVNSDNGNIYALRSFDHERLKSLQITVRA
QDAGFPPLSSNVSVNVFVLDQNDNAPVIVAPVPVPRNDTAPGEAVPRSVDPGYLVTKISA
ADADAGQNSRLFYQMLQATDPSLFSVALYTGEIRTMRPLTGEDATRHRLVILVKDNGQPA
LSATVSIILSVVDSLPDSRPDLDDLSLIPHHSSHFALYLIVSLGAISFTFLVAIIVLVAV
RRLKGRPSDRESNFPSVGGGGGCCCCCRPRSEAPTATEMFKKTNLNVRMSAGASGCAEAS
GNGALPQVYCYQMCLTPESSKSDFMFLKPCSPVMSVQQNNAKSTDYLTSGWSALDRNELT
NNRAATPNELKYSNKDWTLTKNQRNSAYKRYSSANMEGTLSRQQKYDADGFSCSLAPQYW
TWGNHMKDCKISLQEEAAPNYSWTPQYTQPHSEPPDYQHNVYIPGTTSGYSTLKLAPRGD
LDVYNTFSTFGKKKRFISSYEQSFDGDDGLISNPIFK
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggacacacgaggaagggagaaaggaccgtctgggaaatggcacgcagtgtgccgtttg
gcgctgttcacttgcttcttggacgcggtccggggacagatccgctactcaatcccagag
gaactggagcacggcgcgtttgttggcaacattgcggaggacctgggcttggatttggac
aagctgtccgcgcgcagattccgcatagtctcgggcgccaagaagcaatatgtggaggtg
aatttggaaaacggagttttattcgtcaatgaaagaatcgaccgcgaggaactgtgcgag
cagagtttgtcctgctctttccacttgcaagtagtcattgaaaaccctctggagctttac
agggtggaagtggaaatcttggacgtcaatgataactctcccgctttcccgtggaccgag
ttcaatctggacatatcggagtccgctgcgcctgggtcccgtttccctctggagagcgcg
caggacttggacgtcgggtccaactcgctgcgcacctatctgctgagtgtaaacgagcat
ttcctcctggacatacagacgcgcagcgatggcagtaaatttgcagagctcgtcctgcaa
agcccactggacagggagcagcagggtgcgcatcaaatggtcctaacagcggtggacgga
ggcgcgccggagcgatccggcactgcgcaaattgacatcaccgttttggatgcgaacgac
aacgcgcccgtgttcgatcagtcgttctacagagtgcgactggcggaaaacgcgcccaaa
ggcacagttgtcatcaaactcaacgcgtccgacctggacgagggtcccaacgctgacatc
acctattcgttcagcggccacgctcccatcaaagtgcgccagctcttcagcgtggattcg
cgcacgggggaaatcaaagtcaagggagtgattgattacgaaaaggccaggatgcacgaa
atttacgtgcaggccaaagacaaagggccctccgccgtggcggtccactgcaaagtgctg
gtgaacgttttggatagaaacgacaacgtcccggaggtgatcctgacctcagtgtccaca
cctgtgcaggaggacgcgcccccgggcacggtgatcgccgtcatcagcgtgatggacaaa
gactcgggggaaaacgggaatgtggactgcgagattcccaatcaggttcccttccagctc
cactcctcctttaagaactactatacactagtgaccagcgactttctggacagggaggca
gtggcggagtacaacatcaccctcaccgccagagacatgggctcgccacctctattcact
cgcaaaactattttagtgcaggtgtccgatgtgaacgacaacgcgcctcacttcaaacag
ccctcgtacacggtgtatttgaccgagaataacgcaccgggggcatccatctgcgcggtg
gctgcccaggacccagattccggtcagaacgcgtacctctcgtactctatagtggaaggc
gacattctgggcatgtcggtgtccacgtacgtctccgtgaactcggacaacgggaacatt
tacgcactgcgctccttcgaccacgaacggctgaaaagcctccagatcaccgttcgggcg
caggacgccggtttcccgcccctgagcagcaacgtctcggtgaacgtctttgttttggat
caaaacgacaacgcgcccgtgatcgtggcgccggtgccggtgccgcggaacgacacggcg
cccggcgaggcggtgcccagatccgtggaccccgggtacctcgtcaccaaaatcagcgcg
gcggacgcggacgcgggccaaaactcgcgtctcttctaccaaatgctccaagcgacggac
ccgagcttgttcagcgtcgccctgtacacgggcgagatcaggacgatgcggccgctgacg
ggggaggacgccacgaggcacagactggtcatcctggtgaaggacaatggtcaaccagcg
ctctcggccacggtttccatcatcctgtcagtggttgacagcctgccagattcgcggccc
gatttggatgacctgtcactaatcccacatcacagctcccacttcgccctgtacttaatc
gtgtccctgggcgcaatctccttcacatttctggtggctattattgtcctggttgcagtg
cggagactgaagggcaggccgtccgacagggagtccaacttcccctccgtcggcggcggc
ggcggctgctgctgctgctgccgccctcgctcggaggcgcccaccgccacagagatgttc
aaaaagaccaacttaaacgtccggatgtccgcgggcgcgtccggctgcgcagaggccagc
ggcaacggcgccctgccgcaggtctactgctatcaaatgtgcctcacgccggaatcgtcc
aaaagcgacttcatgttcctgaagccgtgcagcccggtgatgtcggtccagcagaacaac
gccaagagcacggactacctgacctcgggctggagcgcactggaccgcaacgagctgacc
aacaacagagcagcaactccaaacgagctcaagtattcaaacaaggactggactttgacc
aagaaccaacgcaactcggcatacaagaggtacagttcagcaaacatggagggcactctt
tcacgtcaacagaaatacgatgctgatgggttctcctgctccttggcaccgcagtactgg
acgtggggaaaccatatgaaagactgcaagatttctctccaggaggaggcggctcccaac
tactcgtggactcctcagtacacgcagccccactctgaaccgcccgactaccagcacaac
gtgtacatccccggcaccacgtccggctacagcaccctgaagctggcgcccaggggggac
ctggacgtgtacaacaccttctccacattcgggaagaagaagagattcatctcgagctac
gaacaatctttcgacggagacgatggtctcataagcaaccccatctttaaatga
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integrated database retrieval system