KEGG   Scophthalmus maximus (turbot): 118300143
Entry
118300143         CDS       T09850                                 
Name
(RefSeq) tubulin alpha chain isoform X1
  KO
K07374  tubulin alpha
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04145  Phagosome
smau04210  Apoptosis
smau04530  Tight junction
smau04540  Gap junction
smau04814  Motor proteins
smau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118300143
  09143 Cell growth and death
   04210 Apoptosis
    118300143
  09144 Cellular community - eukaryotes
   04530 Tight junction
    118300143
   04540 Gap junction
    118300143
  09142 Cell motility
   04814 Motor proteins
    118300143
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118300143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smau03019]
    118300143
   03036 Chromosome and associated proteins [BR:smau03036]
    118300143
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smau04812]
    118300143
   04147 Exosome [BR:smau04147]
    118300143
Messenger RNA biogenesis [BR:smau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     118300143
Chromosome and associated proteins [BR:smau03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     118300143
Cytoskeleton proteins [BR:smau04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    118300143
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118300143
  Exosomal proteins of other body fluids (saliva and urine)
   118300143
  Exosomal proteins of colorectal cancer cells
   118300143
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 118300143
NCBI-ProteinID: XP_035480166
LinkDB
Position
2:13818554..13834274
AA seq 468 aa
MISSLDLQNFTENRKILSQRECISMHVGQAGTQMGNACWELYCLEHGIQPDGQMPSDKTV
GGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG
KKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP
SYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAY
HEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQ
FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR
AFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSVGDEGEEGEEY
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgatctcttctctcgacctgcaaaacttcactgaaaatcgtaagattttgtcacagcgt
gagtgtatttctatgcatgttggccaggccggcacccagatgggcaatgcatgctgggag
ctctactgtctggagcacggcatccagccagatggtcagatgcccagtgacaagacggtc
ggcggcggagacgactccttcaacaccttcttcagtgagactggagctggcaaacatgtc
cccagagctgtttttgtggatttggagcccacagtcatagatgaagtgcgaacaggaatt
tatcgtcagctcttccaccctgagcagctgatcactggaaaggaggatgcagcaaacaac
tatgctcgtggtcactacacaattggcaaggagataatcgacctggttttggacaggact
cgtaaactggctgaccagtgcaccgggctccaaggtttcctcatcttccactcgtttgga
ggaggaactggctcaggattcacctctctgctgatggagcgtctctctgtcgactacggc
aagaagtccaaactggagtttgctgtttaccctgctcctcaagtgtccacagcagtggtt
gaaccctacaactccatcctgaccacccacaccaccctggagcactccgactgcgccttc
atggtggacaacgaggccatctatgacatctgccgcaggaacctggacatcgagcgccca
tcctacaccaacctcaacaggctgattggacagatcgtctcctccatcaccgcctccctg
cgcttcgatggcgccctgaacgttgacctgacagagttccagaccaacctggtaccctac
cctcgtatccatttccctctggccacctatgccccggttatctcagcagagaaggcctac
catgagcagctcactgtggctgaaatcaccaatgcctgcttcgagccagctaatcagatg
gtgaaatgtgaccctcgccatggcaagtacatggcctgctgtctcctataccgtggcgac
gtggtgcccaaagatgtcaactctgccatcgccaccatcaagacaaagcgcaccatccag
tttgtggactggtgtcccactggcttcaaggttggtatcaactaccagccccccactgtg
gttcctggaggagacttggccaaagtgcagagggccgtgtgcatgctgagcaacaccacc
gccatcgccgaggcctgggctcgactggaccacaaatttgacctgatgtacgccaagagg
gcctttgtccactggtatgttggagagggaatggaggagggagagttctcagaggccaga
gaagacatggctgccctggagaaggattacgaagaggttggaacagacagcgttggggat
gaaggggaggaaggagaggagtactag

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