Scophthalmus maximus (turbot): 118300154
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Entry
118300154 CDS
T09850
Name
(RefSeq) CD166 antigen homolog isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118300154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118300154
04090 CD molecules [BR:
smau04090
]
118300154
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
Other
118300154
CD molecules [BR:
smau04090
]
Proteins
118300154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
C2-set_2
Ig_2
I-set
V-set
C1-set
Ig_PDGFR_d4
Syndecan
Par3_HAL_N_term
Motif
Other DBs
NCBI-GeneID:
118300154
NCBI-ProteinID:
XP_035480195
LinkDB
All DBs
Position
2:8278802..8352909
Genome browser
AA seq
633 aa
AA seq
DB search
MCHLQLSLSQRPRSRCVPDFPQLLPTTVTLSARRVPTTLTRRLLLLLVVVVVVSLPHARR
SLFSSGATRATVSSGMTPAAFLLLALAGAGTLVQVLGTKRVTALYGETIVIPCNEGAALP
EDLMFIKWKYERDVGPAGDLLIKQAHSDQATVQATDDYANRVSIDDKSNLLIAQATLKDQ
KTFTCMVVSGSNLMEFPVSVAVYKKPTSVQVLDKAEALQRDKPTTVGTCVATDANPAATI
TWKKNGQLLAADGKAVVITPSVKLDPSTGLSTTSSMLQYVVTKEDVGAVFACVSTHELTN
QETDLDPFPIHYPTEKVSLQIMSKRPIVEGDNVTLKCHADGNPPPSSFFFHIKGHKMLVE
NLDTYTLASISREAAGDYKCSLFDNETLEASQSISVGYLDLSLSPTGKVVKTVGDTLPVK
MEKNSSGDAKVSWTKNGKASTVPEFSKLTYADTGVYLCEVSMGGLTRRQSFQLVVEGRPV
ITSLTKHRADDAKVLTCEAEGVPEPTFQWSVNNTNEESSYINGKATHKITVIPRVNLTVS
CSVSNKLGDDVMTINVSSVFKEEREEKGSEEESEDQAKLIVGVVVGLLVAAGVVGLMYWL
YMKNSRQGSWKTGEKEDGTSEENKKLEENNQTV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcacctgcagctctccctctcacagagaccacgctctcggtgtgttccggacttt
ccgcagctcctcccgacaacagtgactttatccgcgcgccgcgttccgaccacactcaca
cgccggcttctcctcctcctcgtcgtcgtcgtcgtcgtctcccttccgcacgctcgccgg
agccttttctcctcgggagcaacgagagccactgtgtctagcgggatgactccggccgcc
ttcctgttgctggcgctcgccggcgccgggacgctcgtccaagtgttgggtacaaagaga
gtgactgccctgtatggagagaccattgtcataccgtgcaacgaaggagctgcgctacca
gaagatctgatgttcatcaagtggaaatatgaaagggacgttggccctgccggcgatctg
ttgatcaaacaggcccacagtgaccaggccacagttcaggccacagacgattatgccaac
cgggtcagcatcgatgacaaatccaacctgctcatcgcccaggccacacttaaggaccag
aagacattcacctgcatggtggtgtccggctccaacctcatggagttccctgtctcggtt
gctgtttacaagaaaccgacatcagttcaggtgttggacaaggctgaggcactgcagagg
gacaaaccaacaacggtgggaacatgcgttgcgacagatgcaaaccccgcagccaccatc
acatggaaaaagaacgggcagctcttagcagctgacgggaaagccgttgtgatcacgccc
agcgtgaagctggacccatccacaggcctctccaccacgtcctccatgctccagtacgta
gtcaccaaggaggatgtcggcgcagtgttcgcctgtgtgtccacacatgagctgaccaat
caggagaccgacctggacccttttcccattcactatccaacggagaaggtgagcctccaa
ataatgtccaagaggcccatcgtggaaggagataacgtgacgctgaagtgtcacgctgac
ggcaaccctccgcccagctccttcttcttccacatcaagggccataaaatgctggtagaa
aatttggacacctacacgctggcttccatcagcagagaggctgcaggggactacaaatgc
tccctgtttgacaacgagacactggaggcctcccaaagcatcagtgttggctacctggac
ctgagtctgagtcccacagggaaggtggtgaagacagtaggggacaccttgcctgtgaag
atggagaagaacagctcgggcgatgctaaagtgtcctggacaaagaacggaaaggcatcg
acggtgccagagttcagcaagttgacctatgctgatacaggagtctacttatgtgaggtt
tccatgggcggcctcacacggcgccagagctttcagctggtcgtggaagggaggcctgtg
atcaccagtctaaccaaacaccgtgctgacgacgccaaagttctgacctgcgaggcggag
ggagtaccggaacccaccttccaatggagtgtcaataacaccaacgaggagagctcctac
attaacggcaaggccacccataaaatcactgtgatcccaagagtgaacctgactgtcagc
tgcagtgtcagcaacaagctgggagatgacgtcatgaccatcaatgtttcctctgttttt
aaggaggaaagggaagaaaaaggctcggaggaggaatcggaggaccaggcgaagctcata
gtgggtgtggtggtggggctcctcgttgctgctggagtagtggggctcatgtactggctc
tacatgaagaattcaagacaaggaagctggaaaactggcgagaaagaggacgggacatct
gaggagaacaagaaactagaggagaacaatcagaccgtctaa
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