Scophthalmus maximus (turbot): 118300210
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Entry
118300210 CDS
T09850
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118300210 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118300210 (nup98)
03036 Chromosome and associated proteins [BR:
smau03036
]
118300210 (nup98)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118300210 (nup98)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118300210 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
118300210
NCBI-ProteinID:
XP_035480313
LinkDB
All DBs
Position
2:complement(26794629..26813490)
Genome browser
AA seq
1839 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGNASTFGQQNAGFGATGGFGTSAFGTTTNTGGLFGTTQNKPGG
LFGSSTFSQPPAASSASTGFGFGATSATSTSLFGSTATGASGGLFSQPNNAFGATKPTSF
GSFGTSTNSSGGLFGATNTASNPFGAASSLFGGAGGFSATQQQQQQQPGTTVKFNPPTGS
DTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTTQMAAATASLFSSA
TPTSSAATGLFGAAAPNASFSFGPNKGTFGAAAAAPGGFGAATGSLFTQPTQQPASSLFK
PFGQTTTAPNTGFSFGNTNTIGQANTSTMGLFGQTAPAQAGGLFGAAQTSTAPGFGTATG
LFGQTNAGFGNVGTSSTLFGNKTSGFGATTTSAPSFGTGGGLFGNKPALTLGPGTNASSF
GFGTNPAAGSLFGNKPATGGLGTGLGTSFGAAVGAGQTSLFGNNQNKLGTTLGTMGTFGA
TGFNSGSSALGFGAPQQPVALTDPSGAAAQQAMLQQQLSVLAYSPYGDSPLFRNPLSDPK
KKEERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKALTSSGSSKSQLFDGLDDDEPSLT
NGAFVPRKSIKKLVLKNLNSSQYNSQTEIETDDLASPSEYPHNGHSLVEDEDELRELVRP
GSRVDDDPEVTHFYVNPIAKPIPQGRVHASLQDTISDLNMHKPARNGLELSSDDVSASLG
EESLQEEREEEPQEVQQAPHPAGIVLNRVGYYTIPSMKDLAEMVDDHGDCSVDNFTVGRK
GYGSIFFPGEVNVTGLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPND
KTSCAQIRSPERLTDMNYEGRLEKASRKQGARFLEYRSETGSWVFEVAHFSKYGLQDSDE
DDDVPLKTDPKKLKTMMSLPPSQQQVAPQAQSKVVVEVPSGGVAELDSDMADITQSFPTE
SMLGGGEEEDHDAESDLPGAESTSAKLGGLTLAEHDGISASSHIASSLGINPHTLQIMKA
SLFAEDEEESDMFVDRGVMKVDVSSPRLVLTGAQSRTSVGGLLQARFTSGLLSQLSDSSP
HPPRPLSRASPSLGDAPRSLHWAGPSPSFLLPPRTPEPSVRTVGVRRLGGPVALKESVTV
GKGSFLMDTGLFVGRSFRVGWGPGWTLAHCGERLSSPTSKHQEQTGKTDFSFLPKPARSK
PLVESPYKVVLEQLVGLEPRATCEEEGEGSQAVLQRPLEICLQHSTISATDASACPLVRP
QLGVAALHEYAKWITELNDAQGDADPILGHWAEVWTLCAALWGRLGPADQEPDDDAPSDY
EQQLERRRTFSAWLSHGATCRVEEEVAQVERGRHTDAIFSYLTGNRISEACRLAQKEGDH
RLSLLLSQAVGSQYGRDLLALQLADWNRMQTDCYLPEERLRIFTLLAGKPVWQSSDSVVN
VCSQLDWKRCVAVHLWFMLPPTASVADALAKYEAAFQGSCEGGKYACAPLPPYLEAEKLD
MMMDEEEEEEESKRPLYDLCFHLLKLYSDRHYSLQQLLEPLTITWQRLDYRLSWHLWGVL
QALHYSHLSASRQGLLHASYAAQLESAGLWHMAIFILLHIPEHTQRERAVREMLTLHCPL
LETDESLRRERFLTERLLIPGQWIHEAKATRARRDADRHQEALQLYRAGYWSQCHRLLIQ
HLASDCIINDNHDYLLEFLEGLAVPEHSTSIQDWDTAGRVYLDYIRVIKTLQDIQQMENS
GYELERLYTDVTSLCGRIELLPCSTARDRLAQSEMAKRVSNILRVVLSLQQGDAASDSLG
VPLAQLAPHVTRLPMPEDYTLEELRGLTQSYLRQLIVGQ
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgttcgggacgcccttcggcggggggacgggcgggttcggcaacgca
tccaccttcggacaacaaaacgccggcttcggggcgacgggcggcttcgggacgtctgcg
ttcgggacgaccaccaacaccggaggcctgttcggcaccacacagaacaaacccggcggc
ctgttcgggtccagtacgttcagccaaccgcccgctgcctcctccgccagcaccggtttt
ggcttcggcgcgaccagcgccacgtccaccagcctgttcggcagcaccgcgaccggcgcc
agcggcggactcttctcccagccgaacaatgccttcggcgccaccaaacccacatctttt
ggaagcttcgggacaagcaccaacagcagcggcggcttgttcggggcgaccaacacagcc
tccaacccgttcggtgcagccagctcactgttcgggggcgcggggggattctccgccacg
cagcagcagcagcagcagcagccggggacgaccgtgaagttcaatcctccaacaggaagt
gacacgatggtgaaagccggcgtgaccacaagcatcaacaccaaacaccagtgcatcacg
gcaatgaaggagtatgagaacaaatctctggaggagttgaggctggaggattaccaggcg
ggccggaagggcccgaccacccagatggcagctgcgacggccagcctgttcagttcggcc
acgcccacatccagtgccgccacgggcctgtttggcgccgcagcccccaacgccagcttc
tcgtttgggccgaacaaaggcacgtttggagcagcagcggcggcgcccggcgggttcggt
gccgccaccggtagcctgttcacgcaaccgacccagcaaccggccagcagcctgttcaag
ccgttcggtcagaccaccactgcgcccaacactggcttctccttcggcaacacgaacacc
attggccaggccaacaccagcaccatgggtttgtttggccagactgcgccggctcaggcg
ggcgggttgtttggcgccgctcagaccagcacagcccccggcttcgggacggccaccgga
ctgttcggacaaaccaacgccgggtttggaaacgtcggcacatcgtcgactctgttcggt
aacaagacaagtgggttcggcgccaccaccaccagcgccccgtccttcggcaccggtggc
gggctcttcggcaacaagccagccctcacgctgggacccggcaccaacgcgtcctccttc
ggcttcgggacgaacccagctgcagggagtctgttcgggaacaaaccagccactggcgga
ctcggcaccggactgggaaccagctttggagcagcagtgggcgccgggcagacgtcgctg
ttcgggaacaaccagaacaaactgggaaccacgctgggaacgatgggaaccttcggagcg
acgggattcaacagtggatccagcgccctgggcttcggagcgccgcagcagccagtcgcg
ctcacggacccgagcggcgccgcggcccagcaggccatgctccagcagcagctcagcgtt
ctggcatattctccgtacggagactcgccgctattcaggaacccgctgtcagaccccaag
aagaaggaggagcgtctgaaaccaaccaatccaacagcccagaaggctctgaccacgccc
acccactacaagctgacccctcgacccgcaaccagggtccggcccaaagcgctgacgtca
tccggctcatccaagtcgcagctatttgacggcctggacgatgacgagccctcgctcacc
aatggcgccttcgtacccaggaagagtatcaagaaacttgtgttgaagaatctgaacagc
agtcagtacaacagccagacggagatcgagacggacgacctcgcttcaccatcagagtat
ccacacaacggacacagcctggtggaggatgaggacgagttgagggagctggtgaggccc
ggcagccgagtggacgacgaccccgaggtcacgcacttctatgtcaaccccatcgccaag
ccgatcccgcagggccgcgtccacgccagcctgcaggacaccatcagtgacctgaacatg
cacaaacccgccaggaacggcctggagctgagcagtgatgacgtgtcggcgtctctgggg
gaggagtctctgcaggaggagagggaggaggagcctcaggaggttcaacaagctcctcat
ccggcaggcatcgtcctgaaccgagtgggttactacaccatcccctccatgaaggatctt
gcggagatggttgacgaccacggagattgttcagtggataacttcaccgttggcaggaaa
ggctacggttccatcttcttccccggggaggtgaacgtgacgggactgaacctggacgag
atcgtgcacttcagacgcaaggaggtcatcgtgtacccggacgacaagaacaagccacca
gagggggaggggcttaacaggcgggcggaagtgacactggacggcgtttggccaaatgac
aagacgagctgtgctcagatccggagccccgagcgtctgaccgacatgaactacgagggg
cgtctggagaaagcctcgcgaaaacagggagcgcgtttcctggagtaccgatctgagacg
ggctcctgggtgttcgaggtggcccacttctccaaatatggcctccaggactctgacgaa
gacgacgacgtgccgttgaaaaccgaccccaagaagctgaagaccatgatgtcacttcct
ccttcccagcagcaggtggcaccacaggctcagtccaaagttgtcgtggaggttccaagc
ggtggcgtggcggagctggacagcgacatggccgacatcacccagagcttcccgacagag
agcatgctgggaggaggggaggaggaggaccacgacgctgagagcgacctgccgggggcg
gagtcaacgagcgcaaagctcggaggtctgaccctcgccgagcacgacggcatctcggcg
tccagccacatcgcgtcttcgctgggcatcaacccgcacactctgcagatcatgaaggca
tctctgttcgcggaggacgaggaggagagcgacatgtttgtggatcgaggagtgatgaag
gttgacgtctcctctcctcgtctcgtcctgacgggagctcagagcagaacgtctgtgggc
ggtctccttcaggctcgtttcacctccggcctcctctctcagctctcagactcttctcct
caccctccacgtcctctgtcccgggcgtccccgtctttgggcgatgccccccgctctctc
cactgggcggggcccagcccctccttcctgctgccccctcgcaccccagagccgtcggtc
aggacggtgggcgtacggcgactgggcggccccgtcgccctcaaagagtcggtcactgtc
gggaaggggagttttttgatggacaccgggctatttgtgggtcgatccttccgggtcggg
tggggtcccggctggacgctcgcgcactgcggcgagcggctgagttcaccgacctccaaa
caccaagaacagaccggcaagaccgacttcagcttcctgccgaaacctgccaggagcaaa
ccactcgtcgagagcccgtacaaggtggtgttggagcagctggtgggtcttgagcctcgg
gcaacctgcgaggaggagggtgaagggagccaggcggtgctgcagcgccccctggagatc
tgcctgcagcacagcaccatcagcgccactgatgcctccgcctgccccctggtgcgaccg
cagctcggcgtggcggcgctgcacgaatatgccaagtggatcacggagctgaacgacgca
cagggcgacgcagaccccatcctgggccactgggccgaggtgtggaccctgtgtgcggcg
ctgtgggggcggctgggccccgcagaccaggagccggatgacgacgcgcccagcgactac
gagcagcagctggagagacggcgaaccttctcggcctggctgtcgcacggcgccacctgc
agggtggaggaggaagtggcccaggtggaaagggggcgccacacggatgccatcttcagc
tatctgacgggcaaccgcatcagcgaggcgtgtcgactcgcgcagaaagaaggtgaccac
cgcctgtcgctgctgctgtcgcaggccgtgggctcgcagtacggccgcgacctgctcgcc
cttcagctcgccgactggaaccgcatgcagacggactgctacctgccggaggagcggctg
cgcatcttcacactgctcgctgggaaacctgtgtggcagtcgtcggactccgtggtgaat
gtttgctcgcagctggactggaaacgctgcgtcgccgttcacctctggttcatgttgcct
ccgaccgcctccgtggcggacgccctcgccaagtatgaagctgccttccagggctcgtgt
gagggggggaagtacgcctgcgcccccctgcctccatacctggaggcggagaagttggac
atgatgatggatgaggaggaagaggaggaggagtctaaacggccgctgtacgacctgtgt
ttccacttgctcaaactctacagcgacagacactacagtctgcagcagctgctggagccg
ctcaccatcacgtggcagcgcctggactatcgtctcagctggcacctgtggggcgtcctg
caggcgttacactatagccatctgagcgcctcgcggcagggcctcctccacgccagctac
gccgcgcagctggagagcgccggcctctggcacatggccatcttcatcctgctgcacatc
cccgagcacactcagcgcgagcgagcggtgagggagatgctgacgctgcactgccccctg
ctggagacggacgagtcgctgcggagggaacgcttcctgacggagcggttgctgatcccg
gggcagtggatccacgaggccaaggccaccagggcccggcgggacgctgaccgccaccag
gaggcgctgcagctttaccgggccgggtactggagccagtgtcaccggctactcatccaa
catctggcctcagactgcatcatcaacgacaaccacgactacctgctggagttcctggag
gggctggcggtccctgaacacagcaccagcatccaggactgggacacggcggggagggtc
tacctggactacatccgggtcatcaagaccctgcaggacatccagcagatggagaacagc
ggctacgagctggagcgactctacaccgacgtgacgtcgctctgtggcagaatcgagctc
ctgccgtgcagcacggccagagaccggctcgcccaatcagaaatggcgaagcgtgtgtcc
aacatcctgcgcgtggtgctcagcctgcagcagggcgacgcggcgtccgactccctcggc
gtccctctcgcccagctggcgccgcacgtcacccgcctgccgatgccggaggactacacg
ctggaggagctgcgcggcctcacccagtcgtacctgcggcagctaatcgtcggccaatga
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