Scophthalmus maximus (turbot): 118300438
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Entry
118300438 CDS
T09850
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118300438 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118300438 (zgc:163098)
Spliceosome [BR:
smau03041
]
Complex A
U2 snRNP components
U2 related factors
118300438 (zgc:163098)
Complex B
118300438 (zgc:163098)
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Motif
Pfam:
Surp
RRM_1
CID
cwf21
CTK3
Motif
Other DBs
NCBI-GeneID:
118300438
NCBI-ProteinID:
XP_035480715
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Position
2:complement(15342891..15353033)
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AA seq
866 aa
AA seq
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MADRKGKPVTPIKTKKEQQQRKKKEEEKAAEVFEEFLASFETSQKNEAKTFVRGGIVNAT
KEEEAAEVKKNKLYRPATKFVPVSQHVLPLSPTESKKSTFKKRTEEKKKSNLELFKEELK
IIQEEREERYKRKKNDPSGGGGGDLDIPLSGRSTLYDDLTVPTTTNLYISCISPKMNEEM
LCKEFGKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERALATLEGKVIMGFEMK
LGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRGRFRNDFTKPLGVSKGELDKTLS
EAVVKVVIPTERNLIFLIHRMIEFVVREGPVFEAIIMNKEKNNPEYRFLFDNKSQNHVYY
RWKLFSILQGEPPTEWKTTDFRMFRGGSLWRPPVLNNYSLSDEERAEAVEDTNPEEEVKK
GQLRNEHRQRLETLLKELTPNRENIASAMLFCLERADAAEEVVGHVAGSFSLLQTPLQKK
IARLYLVSDILHNSCAKVAGASYYRKYFESKLTQIFGDLNAAHKNIQARLQAEQFKQKVM
SCFRAWEDWAIYPEPYLINLQNIFLGFAKAREELTEAAEEVSVDLDGAPLDSAPVDDLDG
CPIGWDPLDGIPVDDIDGVPLGVAIDDIDGMPLDDRNVPLSRVPLSKWEKTSDTETFSQV
KAESKWDTVVEQNDEVNVSVNSQHGEEESEGDSTDDDSCSSIKYDSADFQSSLRSFQMSE
SKRKRLRELEVKVMKIQDELESGKRARKSGMSIQHQVEHCRNKLLQKEFEKDEEKNERLT
SKSKDRSTEDRRDKERSKKSDDGDRRKGQSRDPESKTRKSRSISPLRKRSPKWSKRSRSP
SPDRKAGKSRSRSPHRSHKKSKKSKH
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagaaaggggaaacccgtcactccgatcaaaacgaagaaagaacaacaacag
cgtaagaaaaaggaggaagaaaaagcagcagaggtttttgaggaattcttggcatcattt
gagaccagtcagaagaacgaagcgaaaacttttgtccgtggcggtatcgtgaacgccacc
aaagaggaggaagcagcggaggtcaagaaaaataagctgtatcgacctgctacgaagttt
gttcccgtgtcccagcatgtgttgccgttatcacctactgaaagcaagaagtctacattt
aaaaaaaggacagaagaaaagaagaagagtaatctggaactctttaaagaagaacttaag
attatacaagaagagcgcgaagagagatataaaaggaagaaaaatgatcctagcggagga
ggagggggagacctggatatacctttatcagggcgatcaacattgtacgatgacctaaca
gtgccaaccaccactaacctctacatcagctgcattagcccaaagatgaacgaggagatg
ctgtgcaaagagttcggtaagtatggtcccctggccagtgtgaagattatgtggccccga
accgacgaggagcgctgcaggacctccaacagagcctttgtggcttttatgacacggaaa
gacgcggagagagccttggctacacttgaaggtaaagtgattatggggtttgaaatgaag
ctgggatgggggaaaccggctcgaattccacctcagcccctctacacaccggtgggggtg
agggccacgccgccgcccccctctggtctgccttttaacgcccagccgagaggtcgcttc
cgcaatgacttcaccaagccgctgggcgtgtccaaaggggagcttgacaagactctgtcc
gaagccgtagtcaaagtggttatcccgaccgaaaggaatctaatattcctcattcacagg
atgatagagtttgtggtgcgcgaaggacccgtgtttgaagccataataatgaacaaggag
aaaaacaatccagaatacaggttcctttttgacaacaaaagccaaaatcacgtgtactat
cgctggaaactcttctcaatcctccagggagagccgccaacagagtggaaaaccactgac
ttccgtatgtttcgaggaggctccttgtggagaccccctgtcctgaacaactactcgctg
agtgacgaagagcgggcagaggcggtggaggatactaaccctgaggaggaggtcaagaaa
gggcagcttagaaatgagcacagacagaggctggagacgttgcttaaagagctcacccca
aacagagaaaacatcgccagtgccatgctgttctgtctcgagcgagcagacgcagcggag
gaagtagtgggacacgtcgccgggtctttttctttgctgcagacgccccttcaaaagaag
attgccagattgtatctcgtgtcggacatcttgcacaactcgtgtgccaaagtagccggt
gcatcgtactatcgcaaatattttgaatcaaagctaacccagatatttggagaccttaat
gcagcacacaagaatatacaagccaggctgcaggcggagcagtttaagcaaaaggtcatg
agttgttttagagcctgggaagactgggccatataccctgagccttatctaatcaacctt
caaaacatctttctgggcttcgccaaagcaagggaagagttgacagaggcagcagaggaa
gtgtccgttgatctcgatggtgcgcccttggacagcgcccctgtggatgacctggatggt
tgccccatcggctgggaccctctggacggaatcccggtcgatgacatagacggtgttcct
ttaggagtcgccattgacgacatcgatgggatgcccttggatgaccgaaatgtccccctc
tccagagtgcctttgtctaagtgggagaagacgagtgacaccgagacattttctcaagtc
aaggccgagtccaagtgggacaccgtggtggagcaaaacgatgaggtgaatgtgagtgtc
aactcgcagcacggggaggaggaatcggagggcgacagcaccgacgatgactcctgcagc
tcaatcaaatacgacagtgcagacttccagagctccctccgaagttttcagatgtctgag
agcaaaaggaagaggttgagagagctggaggtaaaggttatgaagatccaagacgagctg
gaatccggcaagagggcgagaaagtccggaatgagcatacaacatcaagtggagcactgc
agaaacaaactgctacagaaggagttcgaaaaagacgaagaaaagaacgagagattaacg
tcaaagtccaaagaccggtcaacggaggacagaagggacaaagaaaggagcaagaaaagc
gacgacggggacagaagaaaaggacagagtagagatcctgagagcaagactcgaaaatcg
aggagcatctctcctttaaggaagaggtctcccaaatggtccaaacgttcccgatcaccg
tctccagacaggaaggcggggaagtccaggtcgcggtcgccgcaccgctcccacaagaag
tcaaagaagagcaaacattga
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