Scophthalmus maximus (turbot): 118300441
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Entry
118300441 CDS
T09850
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118300441 (supt6h)
03036 Chromosome and associated proteins [BR:
smau03036
]
118300441 (supt6h)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118300441 (supt6h)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118300441 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
118300441
NCBI-ProteinID:
XP_035480721
LinkDB
All DBs
Position
2:complement(22203013..22217066)
Genome browser
AA seq
1757 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFLEEDDEEEEENTEDQDEQGNLRGLIDDGEEV
EEEEAPKSGSGAGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDRVK
TLDDDEDDDDEKDMIADEIFHGDAEGELEEGEAVDEPLQHVDDDEEGEDEESDIDDFIVD
DDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEEGWDR
PKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRTTDMPERFQLRSIPVKPAEDDELE
EEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEVPF
IAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSYQFEQISADPDKP
LADGIRPLDTSDMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKTSKKRLKKIKEV
TEDGEEEELEVEEEEEQQQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLR
DSYQRHETEQFPAEPVELAKDYVCSQFTTPETVLEGTRYMVAMQIAREPLVRHVLRQTFQ
ERAKINIKPTKKGKKEIDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAEEEGLLSIDICI
DLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKELKS
KLIAEAKESIVRSCCRRLYNWLKVSPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSRD
TPVFCALINGEGEVVDFLRLPYFMKRRNAFREDDREKKAHDIETLKKFLSSKKPHVVAVA
GENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSEVDFRDYPPLLR
QAVSIARKIQDPLVEYAQVCSSDEDILCLKLHPLQEQVVKEDLLSALYCEYINRVNEVGV
DVNRAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINC
AGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEE
ILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRIPNTEEVFN
LLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELSE
VWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKID
IEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTETEDQKLDEDLKKKQQRTPYIKRVIA
HPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENA
FSLGHTLWINSEEFEDLDEITARYIQPMASFARDLLGHKYFQECHGGSKEKMEELLVRTK
REKPTFIPYFISSCKELPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLFRWF
KDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAIAAVT
GQGQNPNTTPAQWGSSQYGYGGSTGGGGGGSSSAYHVFATPQQPIATPLMTPSYSYTTPS
QQALGTPQYPSSTPQSSHSHTHAHPHMPPHHSHHSHHGSQPGHSSGTPSSSTSSSRGRTP
QQQQPQPQPPQPPKASGSNASAVDWGKMAEQWLKEKEAEGRKKTPRMTPRPSPSPMIEST
PMSIAGDATPLLDEMDR
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttcatcgagagcgaggccgaggagtcagaggaggagtttgaagagaaagac
ctgaagcctaaaaaaacccagaggtttttggaggaagatgatgaagaggaagaagagaac
acagaggaccaggatgagcaaggaaatttacgcggactcattgatgatggagaggaggtg
gaggaggaagaagccccgaaaagtgggagtggagcagggagcgactcagaggaggaagtg
aggcatcggcgtaaaaagcgaaattatgacgactacctggatgatgatgatctcgacctt
attgaggaaaacttaggtgttaaagtgaagagaaggaagaaaaaatatgaccgtgtaaaa
accctggacgatgatgaagatgacgatgatgagaaggacatgatcgcagatgagatcttt
catggggatgcagagggggagctggaggaaggagaggctgtggacgagcctctccaacat
gtagacgatgacgaagaaggagaggacgaggagtcagatatagatgattttattgtggat
gacgatggccagcccatcactaaaaagagaggcaagaagttctcaggatacacagatgca
gccctccaggaggcccaggagattttcggtggtgacttcgactttgccgactttgacgca
gacgcctatgaccagggtgaggaggaggaagaggaccaggatgaggagggctgggaccgg
cctaagaaacagactaaaaggaggcaggggcggaagagcatctttgagatttacgagccc
agtgaactggaaagtagtcacatgaccgaccaggacaatgagatccgcactacagacatg
cccgagaggttccagctacgatccatcccagttaaacctgctgaggacgatgagcttgag
gaggaagccgaatggatcttcagacatggcttctccactcttactatatcgatgcaggag
agcacagattatctcgatagggggacaaccacaaacttcagcaggaaagggccgagcact
attgcaaagatcaaagaggccctgaacttcatgaggaatcaacagtttgaggttccattc
atagctttttacaggaaagaatatgtggagccagagttaaacatcaacgacctttggaag
gtctggcagtgggatgaaaagtggactcaactgaagacccggaagcagaatctgacccgt
ctgtttcagaagatgcagtcctaccaatttgagcagatctctgctgatcccgacaaacct
ttggctgacggcatccgtcctctggacacttccgatatggagaggctgaaagatgtgcag
actcttgaagagctgggggatgtgtataaccactttctgctctactacggccgagacatc
cccaagatgcagaatgctgccaagaccagcaagaagaggctcaagaagatcaaggaagtg
acagaggatggtgaagaagaggaattggaggtagaggaagaagaagaacaacaacagaaa
ggacctgacctcaagctggcgtctcggagggatatgtacagcatctgtcagagcgtagga
ctcgatggcttggccaaaaagtttgggttaactccagagcagtttggagaaaatctgaga
gacagttaccagcgtcacgagacagagcagttccccgccgagcccgtggaactggccaaa
gattatgtttgcagtcagttcaccaccccggagacggtgctggaaggaaccaggtacatg
gtggccatgcagatcgctcgggaacctctggtcagacatgttctgaggcagacctttcag
gagagggctaagatcaacatcaaaccgacaaagaagggcaaaaaggagatagacgaggct
cattttgcctactccttcaagtatcttaagaacaaggcggttaaagagctgaatggggat
cagttcttgaagatgtgcctggcagaagaagaggggctgctctccattgacatctgtata
gaccttatcggggtcaaagggtatgctggggaccaaacgtactttgatgagatcaaacag
ttctactacagggacgagttcagtcaccaggtgcaggagtggaacaggcagcgaacctta
gccatagagagagcgctcacccagttcctctacccccagatggccaaggagctcaagagc
aaactgatcgctgaggccaaagagagcattgtcaggtcctgctgtcgccggttgtacaac
tggctcaaggtgtctccgtacaggccagatcagcaggtggaggaagacgacgatctgatg
gatgagagtcagggcaaaggcattcgggtactgggtgtagcctatgcacccagcagagat
acgccagttttctgtgctctgatcaatggggaaggagaggtggttgacttcctgcgtctg
ccctacttcatgaagaggaggaatgccttcagggaggatgatagagagaagaaggcgcac
gacattgaaactctcaagaagtttctgtccagcaagaagcctcatgtggtcgcggttgcc
ggagaaaaccgagacgcccaaatgatcatggaggacattaagaggaccatcagcgagctt
gagcaggagtcctctctgcctgcggtgggagtggagcttgttgacaatgaattggccaca
ttgtacatgaacagcaagaagtccgaggttgatttcagggattacccccccttgctgcga
caggctgtgtcgatagccagaaagatccaggatcctctggtggagtacgctcaggtctgc
agcagcgacgaagatatcctctgcctcaaacttcacccgctgcaggaacaagtggtgaag
gaggatttgctctcggctctttactgtgaatacataaaccgcgtcaacgaggtcggagtg
gacgtgaacagggcgatcgcccatcctcacactcagagcctggtgcagtacgtctgcggt
ctgggaccaaggaagggctcccacctcctcaagatcctgaagcagaacaacacccgtctg
gaaaacagaacccagctggtcacgatgtgtcacatgggacccaaggttttcatcaactgt
gctggtttcatcaagatcgacactgcatcacttggagacagtacggactcctacatcgag
gtgctggatgggtctcgtgtccaccccgagacgtacgagtgggctcgtaagatggccgtg
gacgccctcgagtacgacgagtcagcagaagacgctaacccggccggcgctctggaggaa
atcttggaaaatccagagcgtctcaaagatctggacctggatgccttcgccgaagagctg
gagagacagggttacggcaacaagggaatcactctttatgatatccgtgcagagctgagc
tgcaggtacaaagacctgagagttccctacagaatccccaacactgaggaggtcttcaac
ctgctcaccaaggagactccagagaccttttatatcggtaagctgatcacgagtattgtg
actggtatcgctcaccggcggcctcagggcgagagctatgaccaggccatacgtaacgat
tctacaggtctgtggcagtgtcccttctgccagcaggacaacttccctgagctcagcgag
gtgtggaatcactttgacagtggttcgtgtccaggtcaggccattggggtgcggagcaga
ttagataatggtgtccagggttttattcccaccaagtttctaagtgacaaagtggtcaaa
caccccgaggagagggtcaaggtgggcatgacagtccactgccgcatcatgaaaatcgac
attgagaaattcagcgttgacctcacatgccgcacgtcggatttgatggacaaggccaat
gagtggaagctccccaaggacagctactacgactttgacacagagactgaagaccaaaag
cttgacgaggacctcaaaaagaaacaacagcgaacaccgtatataaagcgtgtgattgcc
caccccaacttccacaatatcagtttcaaccaggcagagaagatgatggagacgctggat
cagggagacttgatcatcaggccgagcagcaagggagagaaccacctcaccgtcacctgg
aaagtggctgacgggatctaccagcacgtggacgtgagagaggagggcaaagagaatgca
ttcagcttagggcacacgctctggatcaacagtgaggaatttgaagatctggatgaaatc
accgctcggtacattcagccaatggcatcgtttgcccgagatctgctgggacataagtac
ttccaggagtgccacgggggaagcaaggagaaaatggaggagttgctggtcaggacaaag
agggagaagccaactttcattccttattttatttcgtcctgcaaagagctgcccggaaag
ttcatactgggctaccagcctcgcggaaaaccacgggttgagtatgtgaccatcacccca
gatggcttccgctaccgctcacagatatttcccacagtaaacggactgttccgttggttt
aaggaccattaccaggagcctgtaccgggcatcactccgagcaacagcagccgaacaaga
actcctgcctccctgaacgccaccccagccaatatcaacatcgcagacttgacgcgagct
gtcaacgccctcccacgcaacatgacctcacagatgttcagtgccatcgctgcggtcact
ggccagggccagaaccccaacaccacacccgcacagtggggctccagccagtacggctat
ggaggcagcacaggaggaggaggaggggggagctcctctgcttatcacgtgttcgccaca
ccacagcagcccatcgccacgcccctgatgacacccagctactcctacaccacgccgagc
cagcaagccctgggcacgccgcagtaccccagctccaccccgcaatcctcgcactctcac
acgcacgcccacccgcacatgccaccacatcacagccaccacagccatcacggcagccaa
cccggccactcgtccggcacgccgtcatcctccacctcatcatccagaggacggacgcca
cagcagcagcagccgcagccgcagccaccgcagccgccaaaggcaagcggaagcaacgcc
tccgcagtggactggggcaaaatggcggagcagtggctgaaggagaaagaggcggagggg
cggaagaagaccccgaggatgacgccgcggccgtcgcccagccccatgatcgagagcacg
cccatgtccatcgccggagacgccacgcctctgctggatgagatggaccgatag
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