Scophthalmus maximus (turbot): 118300548
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Entry
118300548 CDS
T09850
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118300548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118300548
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118300548
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118300548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
PA
Motif
Other DBs
NCBI-GeneID:
118300548
NCBI-ProteinID:
XP_035480934
LinkDB
All DBs
Position
2:10943112..11027688
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AA seq
826 aa
AA seq
DB search
MTVPQRRLAGLWPWLFMAALQVVLGQPGLEPERPALRAVIRVTLLRSEPAGQPITLEGLF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDALPRPVVLVEAEDAEELMGLVNKNEEAKVLIEILVEQS
RWPHYDVGILLTIILAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYSSQGC
SGSQRHRAAWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCP
LCMHNIMGEDKHSYRAERQPPRSRLQQSSEQSQGFLHPQPYSSPHNHPFPQHAIPFSMRP
HYPRGPSGPYPPLGHYGGSSPMDAQTLRFLSSRPLGPGCGYRPPAEGPGRPHRIGGNCRT
STHHYTPRRSCHNYRSSCPTQRSASCSRLHHAASVMPQTRGAAARSRQDEGSCSGGSYHT
ERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYG
PGAGRGPRRNSLEAGAQARPRSLDSVVNKPGCPEEQPQTVFSHIHYHRHRHHHYEEGEHS
QGPSKGSDEEQGASAAAAPAALVLDKDLPVCPSKHSPCQCPKPDPTDRPGPGQAEFQSHE
RSSPTGPPVLMSPLPLQLQPHCCHQAHGHPSAPLGRVGGCVLDGPSVCFHQSLDLQDDRS
IHIHYGQGRGGFCCSPPELHPALLPVPLILDSGGMEEWPCCAGAHVVWQKRVPQARSEPQ
LLGPGAAKDRPPCRFHQGPAADCNTDICLYCQTLHHNQGSEEESGV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgttcatggcggccctg
caggtggtgctgggccagccgggcctggagcccgagcggccggccctgcgagcggtcatc
agggtgaccctgctgaggagcgagcccgcggggcagcccatcaccctggaggggctgttc
gtgggagggagcgccggctacgcggaggggaaactgatgcagtatcaccctttgtctctg
tgcaacacaagcgaggatgaaaggcaagagagtgacttcatcaccatcgtcaaactggag
cacagggtaccccgctgtctgccgctgctcgataaggctcgcatggcgctggataaagga
gctcaggctgtaatctttgacgtcagtgatgatgctaatgctgctgctgagctgcgagaa
acagacgcccttccccgaccagtcgtgctggtggaggccgaggacgccgaggagctgatg
ggcttggtcaacaagaacgaggaggccaaagttcttattgagatcctggtggagcagtcc
agatggccacattatgatgtgggtatcctgctcaccatcatcctggctatactgaccatc
gtcttaatctttgccttccgttacaagtgcaagtccaacaggacctgggactccgtccat
cagcagaccatgcgggccattagtcgcctggagactaaaacctacagctctcagggctgc
tcgggctcacagcgtcaccgggcggcctgggggtccgccagcagctccaactcaagcccc
gtctgcgccatttgcctggaggagttccaggacgggcagcatttgaggatcatctcctgt
gctcatgagttccataaagactgcgtggacccctggctgttgcagcaccgcacctgtccc
ctctgcatgcacaacatcatgggtgaggacaagcatagttacagggccgagcggcagcct
ccgaggagcagactccagcagagttcagagcaaagtcaaggcttcctgcaccctcagcct
tacagcagcccgcacaaccaccccttccctcagcatgccatccccttctctatgaggccg
cactatcctcgtggaccctccggaccatatccgcctctgggccactacggcggctcttct
cccatggacgcccaaacgttacgtttcctcagcagcaggccacttggccctggctgcggg
taccgcccccccgcagagggtcccggaaggccccacaggattggaggtaactgcaggacg
tccactcaccactacacccctcgtcgatcctgccacaactatcgctcgtcctgtccgacg
cagcgaagcgcgtcctgctcgagactgcaccacgctgcctctgtcatgccacagacccgc
ggggcggctgcccgcagccggcaggacgagggcagctgctcgggcggcagctaccacaca
gaacgcagtggatacttggctgacgggccggcaagtgactccagctcggggccctgccat
ggctcctccagcgactcagtcctcaactgtacggacgtgtccctgcagggagtctatggc
agctggtccaccttccgtagctctctgagtagtgactacgatccatttgtttattatggg
ccaggtgctgggcggggccccaggagaaacagcctggaggccggtgcccaggccaggccc
aggtccctggattctgtggtgaacaaaccgggctgtcctgaagagcagccacagactgtg
ttcagccacatccactaccaccgccacagacaccaccactatgaggagggggagcacagc
cagggcccgagcaaaggctcggacgaggagcagggggcctccgctgccgcagcaccggct
gctcttgtcctggacaaagacttacctgtgtgcccttccaagcacagcccctgccagtgc
ccaaagccagaccccacagatcggcccggcccgggacaggccgagttccagagccatgag
cgcagcagtcccacgggacctcctgtcctgatgtccccgctcccattacagctgcagccc
cactgctgccaccaggcacacggacacccctccgctcccctcgggcgggttggtggctgt
gtgctcgatggcccctccgtttgcttccaccagagcctggacctgcaggatgaccgcagc
atccacattcactacggccagggcagggggggcttctgctgctctccccctgagctgcac
cccgcattgcttcccgtgcccctcatcctggactctgggggcatggaggagtggccttgc
tgtgccggggcccacgtcgtgtggcaaaagcgggtgccgcaggcacgatcagagccccaa
ctcctggggcctggggctgctaaggacaggccaccctgcaggttccaccaggggcctgct
gctgactgcaacacagacatttgtttatactgccaaacgttacaccacaatcagggatca
gaagaggagtccggtgtgtga
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