Scophthalmus maximus (turbot): 118300611
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Entry
118300611 CDS
T09850
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118300611 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118300611 (cadm1a)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
Nectin family
118300611 (cadm1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
C1-set
Ig_C17orf99
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
118300611
NCBI-ProteinID:
XP_035481027
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Position
2:24092942..24437588
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AA seq
444 aa
AA seq
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MANAGCGSLATILFSFVFQAALLKGAAQYPVVSQNLVTDNVSVVEGEMAIISCRVKDSDD
SVIQLLNPNRQTIYFRDMRPLKDARFQLVNFSENELRVSLSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIEARDEVLSEGNETEMTCTAMSSKPAATIRWMKGDKELPGKPR
VELTYDKMYTVTSRLTFTVNKEDDGVPVICIVDHPAVKDFQAQKYLEVQYKPEVKIVVEF
PQGLTREGENLELTCQAKGKPQPQLVSWVKVDDDVPSHAVITGGDLYIENLNKSYNGTYR
CVASNSVGESFDDYILYVYDALTTTPIPTTATTTTTTTTITTTISYPEVNQDTAPSTEPA
AHDSRAGEGAPRTVDHAVIGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAA
DADTAIINAEGGHTNSDEKKEYYI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcaggctgcggctctctggcgactattctcttttcattcgtctttcaggcg
gctcttctcaaaggagctgcacagtacccagtggtgagtcagaacctggtgacggacaac
gtgtcggtggtggagggagagatggcgatcatcagctgtcgggtgaaggacagcgacgac
tcggtgatacagctgctcaaccccaacaggcagaccatttacttccgagacatgaggcca
ctgaaagacgctcgctttcaactggtgaacttctcagagaacgagctgcgggtgtcactg
tctaatgtctcgctgtcagacgagggtcgatatgtttgccagctctacacggatcccccg
caggaagcctacgctgacatcactgtgctaattcctccaggtaaccccatcatcgaggcc
cgggatgaggtcctgagcgagggcaacgagacagagatgacctgcactgccatgagcagt
aagcctgccgccaccatccgatggatgaagggagataaggagcttccaggcaagcccaga
gttgagctgacctacgacaagatgtacaccgtcaccagccgcctgacgttcaccgtgaac
aaggaggacgacggcgtgcctgtgatttgcatcgtagaccacccggcagtcaaggacttc
caagcacagaaatacctggaggtgcagtacaaaccggaggtcaagatcgtggtggaattt
cctcagggtctgaccagggaaggagagaacttggagctgacgtgtcaggccaaaggcaaa
ccccagccgcagctggtgagctgggtgaaggtggacgacgacgtgccgtcgcacgccgtc
atcaccggcggcgatctgtacatcgagaacctgaacaagtcctacaacggaacctaccgc
tgcgtggcgtccaactcggtgggggagtccttcgacgactacatcctctatgtctatgat
gctctcaccaccacccctatacccaccacagccaccaccaccaccaccaccaccaccatc
accaccaccatctcctaccccgaagtcaatcaagacactgcgcccagcactgaacctgca
gctcatgattcccgagctggagaaggagcgccgcggacggtggaccacgcagtgattggg
ggagtggtggccgtggtcgtcttcgccatgctctgtctactcatcgtcctggggcgctac
tttgcgagacacaaaggtacctacttcacacacgaagccaaaggagcagacgacgcagcg
gacgcagacacagccatcatcaacgcagagggtggccacaccaactcggacgaaaagaag
gagtactacatctaa
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