Scophthalmus maximus (turbot): 118300655
Help
Entry
118300655 CDS
T09850
Symbol
nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03440
Homologous recombination
smau04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118300655 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118300655 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smau03032
]
118300655 (nbn)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118300655 (nbn)
DNA replication proteins [BR:
smau03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
118300655 (nbn)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
118300655 (nbn)
BRCA1-C complex
118300655 (nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
118300655
NCBI-ProteinID:
XP_035481192
UniProt:
A0A8D3B5X6
LinkDB
All DBs
Position
1:complement(12107873..12117793)
Genome browser
AA seq
848 aa
AA seq
DB search
MWILTALQPGGETHYLVASKEYVVGRKNCDILLANDQSISRAHAHLTATDQTLTLKDTSK
YGTFVNSQRLTENTSVNLKSGDIVTFGAFHSKFSVEHQKPVVCSSCLDNDGKASLSQALL
ALGGKLVNSWTQDCTHLVMPSVKVTIKTISALLCCRPIVKPEFFLELNEAAQQKQAPPKA
ESFIPEIDEPSLIKEEVNVGVMPIRKQLFTEKTFIFLSAKQLKRLSAAVSFGRGKSQLLE
EGSLPRDLLESPQSCVVDVTSGSSQTLSSSTTDWANSVKNIIQRKGLRVITESEIGLAAI
FASCDKYCNPSAVMQDSESVSKVKPRIPSASLSQNVAVDETVLPASTQNITAYAVNTEPS
ERSELCKVTGVTAVGETPEKKQNHSSNHPGGSRVVPESMSAQCVVADTMSSSLNAVDNTN
SQRKKPESKLTAEGSSGIRSQPSSSRTNGGTKTFLQKQSPQKPKIPAQVSPQKQSTLTTF
FQPVNKKRPLDDEFSAVMSEAKRPVLASSISRIQTPNTSVTSKETYLRSDRLPAATSRTP
LGSGADLFTGRPDAPEHGVSHTSLEGPRSGKRKEMEAEMQMDELESIMSEDMDFFDEQLP
GNQGQQAQLTGQSSTTQKRSLNTPEDLSSNKRQRVNVEDGGADTRPLVGLEKESGSHKNH
SQQSEQYIVSIKTEPVDPSEIKTTNHESSKSKNLLPFEQDEPSFIEDIDLLKGVNSEDKE
ATKTPLRPVTIKLEVKESKIDEDLPKKLVLVEFRSLTVTVPPKTKPKPMLSNSYAKNFKR
FRKNRVPGAETSPHIIGGSDLLVHNRGKNTDLDEWLKDAAEEERQSRRDETVGDDLFRYN
PTKLTKRR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcctgacggccctgcagcccggaggtgagacccactacctcgtcgccagtaaa
gagtatgtggtggggcgcaagaactgtgacatccttctcgccaacgaccagtccatcagc
agggctcacgctcacctcactgctactgaccagaccctgactttgaaagacacctccaag
tacggcacttttgtcaacagccagcgtttgacagagaacacgtcagtgaacctgaagtca
ggggacattgtcacatttggggcttttcacagcaagttcagtgtggaacatcagaagcca
gtggtgtgttcatcgtgtttggacaatgacggcaaggcgtcgctctctcaggccctgctg
gctttgggcggaaagcttgtcaactcctggactcaggactgcacccacctggttatgcct
tctgtcaaagtcaccatcaagactatttctgcgctgctgtgctgtcgtcccatcgtgaag
ccagagttcttcttagagctcaacgaagctgctcagcaaaaacaggcgcctcctaaagcc
gagagtttcatccccgagattgatgagccaagcttgattaaggaggaagttaatgttgga
gtgatgccaattcgcaaacaacttttcactgaaaagaccttcatattcctcagtgccaag
cagctgaagcgtctgagtgcagccgtgagttttggaagaggaaagagtcagctgttggaa
gagggctccctgccccgggacctgctggagtctccacagagctgtgtggtcgatgttaca
agcggcagctcccaaactctttcatcctcgaccaccgattgggcaaactctgtgaagaac
ataattcaaagaaaaggccttcgagtcatcacagagtccgaaattggtttggctgccatc
tttgcttcctgtgataagtactgcaatccatctgctgtgatgcaagactcagagtcagta
tcaaaagtgaaacccagaatcccaagtgcttcgctgtcacagaacgtggcggtggacgag
acagtgttaccggcttcgacacaaaatatcactgcatatgcagtgaacacggagccatca
gaacgttcggagctgtgcaaggtgacgggggtgacggcagtaggagaaactcctgagaag
aagcaaaaccatagcagcaatcaccccggtggatccagagtcgtacctgagagtatgtct
gctcagtgtgtcgtggctgatacgatgagctcatcgcttaacgctgtagacaacacaaac
tcccagaggaagaagcctgagtccaaactgacagctgaagggagtagtggcattaggtcc
cagccgtcctcttctaggaccaacggcggcacgaagacattcctacaaaagcaatctcct
cagaaaccaaagattcccgcacaagtttcaccgcagaaacagtcgactctgacgactttc
tttcagcccgtcaataagaaaaggcctttggacgatgagttctcagctgttatgtcagag
gcaaagcgacctgtactggcatcatccatcagcaggatacagacaccaaacacttcagtc
acatctaaagaaacatacttgcgttctgacagactccccgcagccacatctcggaccccc
ctgggctcgggagctgatctgttcacaggacggccagatgctccagaacacggggtctcc
cacacctccctggaggggcctcggagtggaaagaggaaggaaatggaagcagagatgcag
atggacgaactggagtctatcatgtctgaagatatggatttctttgacgagcaactgcca
ggcaatcaaggccagcaagcacagctaacagggcaaagttcaacgacacagaaacgaagt
ttgaatacgccggaggatttgtcttcaaacaagaggcaacgcgtcaatgtggaagatggt
ggagccgacacaaggccactggtgggcctggaaaaagagtcgggctcccacaaaaaccac
agccaacaatccgaacagtatattgtctccatcaagaccgaaccggttgatccgtcagaa
atcaagacaactaatcatgagtccagcaaaagcaaaaaccttctgccttttgaacaggac
gaaccgtctttcattgaggacattgatctactgaaaggggtaaatagtgaggataaagaa
gcgactaagacccctctgagaccagttacaatcaaactggaggtcaaagagtccaagatc
gacgaagaccttcctaaaaagctggtgctagtggagtttcgatctctcactgtgaccgta
cctccgaaaaccaaaccaaagccaatgctcagcaacagctacgcaaagaacttcaagcgt
ttccgcaagaaccgagtaccaggagcggagacctcaccccacatcattggagggtctgat
ctgctggttcacaacaggggaaagaacactgatctagatgaatggctgaaagatgcagcg
gaggaggagcgtcagagcagacgagacgagaccgtaggagacgacctcttcaggtacaac
cccaccaaactaaccaaaagaagatga
DBGET
integrated database retrieval system
