KEGG   Scophthalmus maximus (turbot): 118300686
Entry
118300686         CDS       T09850                                 
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K04551  ubiquitin B
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04120  Ubiquitin mediated proteolysis
smau04137  Mitophagy - animal
smau04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118300686
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118300686
   04137 Mitophagy - animal
    118300686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smau04121]
    118300686
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smau04147]
    118300686
Ubiquitin system [BR:smau04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   118300686
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   118300686
  Exosomal proteins of other body fluids (saliva and urine)
   118300686
  Exosomal proteins of colorectal cancer cells
   118300686
  Exosomal proteins of bladder cancer cells
   118300686
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 118300686
NCBI-ProteinID: XP_035481215
LinkDB
Position
2:5514691..5518310
AA seq 457 aa
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtagagcccagc
gacagcattgagaatgtgaaggccaaaatccaagataaggaaggcatccctccagaccag
cagaggctgatcttcgccggcaaacagctggaagatggccgcaccttgtctgactacaac
atccagaaggagtccaccctccatcttgtgctccgcctgaggggaggtatgcagatattc
gtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccattgag
aatgtgaaggccaaaatccaagataaggaaggcatccctccagatcagcagaggctgatc
ttcgctggtaagcagctggaagacggcagaaccctctccgactacaacatccagaaagag
tccaccctccatcttgtgctccgtcttaggggaggtatgcaaatctttgtgaagactctg
actggcaagaccatcaccctggaagtggagccaagtgacaccattgacaatgtgaaggcc
aaaatccaggacaaagagggcatccctccagaccagcagcgtctcattttcgccggcaag
cagctggaagacggcagaaccctctccgactacaacatccagaaggagtccaccctccat
cttgtgctccgcctgaggggaggtatgcaaatcttcgtgaagaccctgactggcaagacc
atcaccctggaggtagagcccagtgacaccattgagaacgtcaaagctaagatccaagat
aaggaaggcatccctccagaccagcagaggctgatcttcgccggcaagcaactagaagat
ggccgcaccctgtctgactacaacatccagaaggagtccaccctccatcttgtgctccgt
ctgaggggaggaatgcagatattcgtgaagaccctgactggcaagaccatcaccctggaa
gtggagccaagtgacaccattgagaatgtgaaggccaaaatccaggacaaagagggcatc
cctccagaccagcagcgtctcattttcgccggcaaacagctggaagatggccgcaccctc
tccgactacaacatccagaaagagtccaccctccatcttgtgctccgtctgcggggaggt
atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtagagcccagc
gacaccattgagaatgtcaaagctaagatccaggataaggaaggtatccctccagaccag
cagaggctgatcttcgccggcaagcaactggaagatggccgcaccctgtctgactacaac
atccagaaggagtccaccctccaccttgtgctccgtctgaggggagggaactaa

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