KEGG   Scophthalmus maximus (turbot): 118300689
Entry
118300689         CDS       T09850                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03082  ATP-dependent chromatin remodeling
smau03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118300689
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118300689
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:smau01009]
    118300689
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smau03021]
    118300689
   03036 Chromosome and associated proteins [BR:smau03036]
    118300689
Protein phosphatases and associated proteins [BR:smau01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118300689
Transcription machinery [BR:smau03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     118300689
    SWI/SNF complex
     118300689
Chromosome and associated proteins [BR:smau03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    118300689
   PBAF complex
    118300689
   SWI/SNF complex
    118300689
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 118300689
NCBI-ProteinID: XP_035481220
LinkDB
Position
2:complement(5695456..5702635)
AA seq 368 aa
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSITTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESNPTDGMLEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSEKENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTIEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcagttggctctcagtaaaaccttcgggcagaagccggttaagttccaattagaacaa
gatggggacttctacatggtcgggtcggaggttggaaactatttgcgtatgttcagaggc
tctctgtataaaagatacccgtccctgtggaggaggctcgcctcggtggaggagaggaag
aagattgtggcatcgtcacatgccactagcgttactctgctgaaggcatcagaatgtgaa
gagatctttgagggtaatgacgagaaatacaaggcggtgtccatcaccacggagccccca
gcttacctcagagagcagaaagcaaagaggagcagtcagtgggtccccacgctgcccaac
agctctcaccatcttgacgccgtgccttgctccaccaccatcaaccgaaacaggatgggc
cgggacaagaaaaggacttttcccctgtgcttcgacgaccatgaccctgcagtgatccat
gagaatgcagcccaggtagaggctctggttccgattcgtctagacatggagatagacgga
cagaaactccgagatgccttcacatggaacatgaatgagaaactgatgaccccggagatg
ttcgcagagattttgtgtgacgacctggacctgaatcctctggccttcgtccccgccatc
gcctctgccattcgtcagcaaattgagtctaaccccacggacggcatgctggaggagcag
gcggaccagagagttatcatcaagctgaacatccacgtggggaacatctctctagtggac
cagtttgagtgggacatgtcggagaaggagaactccccggagtcgtttgcactgaagcta
tgctctgagctgggtctgggtggagagtttgtcaccactattgcctacagcattcgaggt
cagctcagctggcaccagaggacctacgccttcagtgagaacccactccccactatagag
attgccatccgcaacacaggcgatgcagaccagtggtgccccttgctagagaccctcaca
gatgcagaaatggagaagaagatccgagaccaagacaggaacacaaggcgtatgaggaga
ctggccaacactgctccatcctggtag

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