KEGG   Scophthalmus maximus (turbot): 118300707
Entry
118300707         CDS       T09850                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smau03019]
    118300707 (zc3h12b)
Messenger RNA biogenesis [BR:smau03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     118300707 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C PRORP
Other DBs
NCBI-GeneID: 118300707
NCBI-ProteinID: XP_035481250
LinkDB
Position
2:13689795..13702614
AA seq 847 aa
MTAWSMVEKLKMEKRPCREENIDSSEAQHATDESEDGSSSESESEERQRQRVQGNNSSCK
KREPLAVAKPHRQLCRSPCLDRPSFSQSSTVQDLREDETSARPGIKAASEREYQTKMEFA
LKLGYSGEQVETVLNKLGAAALINDVLAELVRLGNKVEPEIQPCSSTATLISRPPCVKEI
RDSPEVSVEEESVDPYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFREKAHKDIT
VFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALVK
CGIGPATAKGESISEVKRVAPKRQSDPSIRSVACEPPEALSVARKSEANSVPSLVSALSV
PTMQPAKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASITYNDQ
FPKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNS
DSFSSYGDLYPSSVDSSLEESMKGQQQSPAQGRMQTFSHGFRHEALTRVQSYGPEEPKQG
PRKQPGSHLAPHIQHVAVGARSSCPGDYPLTQNVLPPLSAQPTRSLGMTRMDSISDSRLY
DSNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQI
WNSPWETPSAVEHQDRYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIV
TKLRSCH
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggaggag
aacattgactcaagcgaggctcagcatgccactgacgagtctgaagatggcagcagctcg
gaaagtgagtcggaagaacggcaacgtcagagggttcaagggaacaacagcagctgtaaa
aagcgggagcctttggccgttgcaaaaccccaccgacagctgtgtcgctcaccatgtctc
gaccggcccagtttttcccagagtagcactgtacaagatttgcgcgaggatgagaccagc
gcgcgaccagggatcaaggcagccagtgagcgagagtatcagactaagatggagtttgct
ctgaagctgggctattcaggagagcaggtggagactgtgctcaacaagttgggggctgct
gctttaattaacgatgttctcgctgagttagtgaggctcggaaacaaagtcgagcctgaa
attcaaccttgcagcagcacagccacattgatatcacgacccccctgtgttaaagagatt
agagatagtcccgaagtgtcagtggaagaggaatctgtggatccctacgacaacctcagg
cccatcgtcattgacggctcaaatgttgcaatgagccatggaaacaaagaggtattctct
tgtcgtggtatccaacttgctgtggagtggtttcgggagaaagcacacaaagacatcact
gtgtttgtcccagcctggaggaaggagcagtcgaggccagacgccctcatcacagaccaa
gaaatactacgcaaactggaaaaagagaagatcctggttttcaccccgtcacggagagtt
caaggcagaagggtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattct
gatggaattattgtgtcaaatgacaactacagagacttgcaaaatgagaagccagagtgg
aagaagttcatagaagagcgtctcctcatgtactcatttgtcaacgacaagttcatgcct
cctgatgatccactgggaagacacggtccaagcctagagaatttcctccgcaagcgtcct
gttgttccagagcacaaaaaacagccctgcccctatgggaaaaagtgcacatatggacat
aagtgcaagtactatcatccagagcgcgtcaaccagccccagcggtcagtcgctgatgaa
ctacgggcctttgccaaattgtctgcagtgaagacaatgagtgagggggctttagtcaaa
tgcggtattggtccagcaactgcaaagggggaaagcatctctgaggtcaaacgcgtggcc
cctaaacgtcaatctgaccccagtatccgctcagtggcctgtgaacctccagaggcgctg
tccgttgctaggaagtctgaggcgaattctgtgccttccctcgtgtctgctctcagtgtg
cccaccatgcagcccgccaagagccacgcagctggggccttgaacacacgatcagccagc
agcccagtgccaggttctctgcaattcgcacacagttctctggagcacatgtcgagtgta
cagtacccaccaattttagttactaatagtcatggcgcctctattacgtacaatgaccag
ttccctaagtatgactctgttagtgaccatggatattattcactgcacagtgatttttca
aacatgagcatgagcagcatgcataatgttgacagtttctgtagcatggagcacgagcac
ggtgtgtatcagagaaatccaagccactgccccgagtcctgcctcagccactcaaacagc
gactcgttctcctcttacggggacctgtacccgagctccgtggacagtagcctagaggag
agcatgaaggggcagcagcagtctcctgcacagggtcgaatgcaaactttctcccatggg
tttcgccatgaagcgctgacaagggtacagagttacggaccagaggaacctaagcagggc
ccccgtaagcagcctggatctcatctagcaccacatatccagcacgtcgcagtgggagcc
aggtccagctgccctggagactatcccctcactcagaatgtcctaccacctttgtcggca
cagcccacacggtctcttggtatgactcgtatggacagtatatcagactcaaggctgtat
gatagtaacccaatgaggcagcggcgccctccgctgtgtcgtgagcagcacgcaagctgg
gaccctctgccttgtggtaatgagtcctatggatatcattcatatccactgagcaacagc
ctgatgccgtgttgcgagcgggtgatggtccgcagcatgcccgacaaaatggagcaaatc
tggaactctccatgggagaccccatcagcagttgaacaccaagatcggtatgtgattcca
gaccaccagtatcaaacatatcggaacctgtgtaacatctttcctgcttacgtagttcac
tcagtaatggagaagaaccctcatttgaccgatccacaacaactcgctgctgttattgtt
acgaaactgaggtcatgccactga

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