Scophthalmus maximus (turbot): 118300787
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Entry
118300787 CDS
T09850
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118300787 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118300787 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118300787 (srsf1b)
Spliceosome [BR:
smau03041
]
Common components
Common spliceosomal components
SR proteins
118300787 (srsf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
118300787
NCBI-ProteinID:
XP_035481432
UniProt:
A0A8D3EFW2
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All DBs
Position
2:complement(16700353..16704050)
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AA seq
255 aa
AA seq
DB search
MSGGGIVRGPAGSNDCRIYVGNLPPDIRSKDVEDLFYKYGAIRDIDLKNRRGGPPFAFVQ
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGGGERGGGGGGGSGAMGPPRGRHG
PPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVH
QLDNTKFRSHEGETAYIRVKTDGPRSPSYGRSRSRSRSRSRSRSRSKSGSRSFSPRRNRG
SPRYSPRRSRSRSRT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggaggcattgtccgtggacccgcgggcagcaacgactgtcggatatacgtg
gggaatctgcccccagacattcgctccaaagacgtggaagatttgttttacaaatacggg
gccattcgtgatatcgatctgaaaaaccggagaggaggaccgccgttcgcctttgtgcag
ttcgaggacccgagggatgctgaggatgctgtttatggccgtgatggttatgactacgat
ggataccgcctgcgcgttgagtttcccaggagtggaaggggtggtggtggaggaggagaa
agaggaggtggtggtggtggtggaagtggagcaatgggacccccaaggggaaggcacggt
cccccgtcccgccgctctgagtacagggttgttgtgtcaggtcttccccccagtggaagc
tggcaggacctgaaggatcacatgcgagaggcaggtgatgtatgttatgctgatgtgttc
cgtgatggcaccggggttgtggagtttgtccgcaaagaagacatgacctacgctgtccac
caattggataacaccaagtttcgttctcacgagggagagacggcctacattcgcgtgaag
acggacggtcctcgcagccccagctacggtcgatctcgctcccgtagccgtagccgcagc
cgcagtcgaagccggagcaagagcgggtcgcgcagcttctcccctcgtcgcaacaggggg
tctccgcgttactctcccaggcgttcccgctcccgctctcgcacctag
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