Scophthalmus maximus (turbot): 118300849
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Entry
118300849 CDS
T09850
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118300849
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118300849
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
YVC1_C
Motif
Other DBs
NCBI-GeneID:
118300849
NCBI-ProteinID:
XP_035481569
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Position
2:14475416..14482216
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AA seq
1024 aa
AA seq
DB search
MENLTPEQWREIMNKKMQFPPELIGAIQEGKIDLLCGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGSSDAMVALLQGVKFDFRQIHEALLVAVDTNQPRVVQRLLDRLDQEKGNKMDV
RSFSQAIYDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLSQKGHVIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLTAFSLSKELRKLSQKEPEFKPQYL
DLEQLCQEFAVELLGMCRNQSEVTTILNSCGDESQDSLEEQAFEEGIPNLSRLRLAVNFN
QKQFVAHPICQQVLSSIWCGNLSGWRGSRTAWKLFVSVGIFLTMPLLCLVYWIAPKSKVG
KTIRIPVIKFLLHSASYLWFLITLLGESITMEMYRDKFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDMMVLSMYLASFALRVLIMLKGYFLCHDHDGTEDCVYF
TQTVREDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFHFLFWTMFGVANQDYVDMPRFALAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAAFYILRGIFRRMCCCCTCNSEQKYPPITSMCNDKGSEASQLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITLLSKVVCRMHSDLKLVQQQLLVDDEQSANDALTK
DGSSILGKYIIGAKNNFRGFNSREEGKNPSLEVTVHHEEVEVDKEKVDADTKQESDPQQN
QAGKCGAEGSRQVTDCDVVKMEEGRAKVDPGNEREIEKKQQVEAEKNENTEIKAREEGAA
GTSLDTVEERVAQDEAGKIREGERLAGGKVGENPKEATTERAESTSDDKTDTQKLVTKFK
DIELQEKKVDARRVKSRKLEHNETETKPGAKKNIPSPTGSSSSQDTGFGSQEGEGSIDGL
LVRP
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgcgagataatgaacaagaagatgcagttccct
ccggagctcatcggtgccattcaggaagggaaaatagatctgctgtgtggactgttgaag
accggcgacggcatcatccgccagctggatgaatctgaggaccgccagtggagagaagcc
ctcaacctgtccatccgcctgggcagcagcgatgccatggtcgccctcctgcaaggggtc
aagtttgacttccgtcagattcacgaggcactgctggtcgctgtggataccaaccagccc
cgagtggtgcagcgtctgctggaccggctagaccaagagaagggcaacaagatggacgtg
cgctccttctctcaggccatctatgaccactctattgacaactcccagtttgcccctggt
gtgacccccctgaccttagcctgccagaaagacctgtatgacatagtgaccatgctcagc
caaaaaggccacgtcatcccatggccacataagatatcctgtgcctgtctggagtgtcgt
aacgggcggcagtatgacctgttgaagttctccttgtctcgtatcaacacctaccgtggc
atcgccagccgggcctacttgtccatcacctctgacgatgccatgctcaccgcgttcagt
ctcagcaaagagctgcgcaagctctcgcagaaagagccagagttcaagcctcagtacctg
gacttggagcaactctgtcaggagtttgccgtcgagttgctgggcatgtgtcgcaaccag
agcgaggtgaccacgatcctcaacagctgtggagacgagagccaggattccttggaggag
caggcctttgaggagggaatacccaacctctcccgactgcggctcgctgtcaactttaac
cagaagcagtttgtggcacacccgatctgccagcaggtgctttcatcaatctggtgtggg
aacctgtcaggctggagaggcagcaggacggcctggaagctgtttgtctcggtggggatc
tttctcaccatgcctctcctctgcctcgtctactggatcgcaccaaagtcaaaggtagga
aagaccataaggattcccgtgatcaagttcctccttcactctgcctcctatctgtggttt
ctcatcacattacttggagaatcaataacaatggagatgtatcgagacaaatttgcatcc
aggcagcagaacatcctgcacagctccttccacatggtgtgggtggtgggattcttttgg
tatgagtgtaaggaagtgtggatcgaggggctgcggagttacttcctggattggtggaac
tgcctggacatgatggtgctcagcatgtacctggcgtcctttgcactacgcgttcttatc
atgctcaaaggttatttcctctgccatgatcacgacggcacagaggactgcgtttatttc
acccagactgtgcgtgaggactggcaccaggaggacccgcagctgattgcagaggtgctg
tttgcagtcaccagcatgttgagcttcacgcggctggcgtacatcctgccagcacacgag
tctcttggaactctgcagatctccataggaaagatgattgatgatatgatgagattcatg
tttatattgatgatcattggaacagccttcctctgtggcatcaacaacgtctacgtgccg
tacgtcatctctccacatcttggcaggtttaacgagacgttccacttcttattctggacc
atgtttggtgtggccaaccaggactacgtggacatgccacggtttgcgttagcagagttc
gtggggaggattctgtacggaatcttcacgctcgtcattgtcatcgtccttctcaacatg
ctcattgccatgatcaccaactcctttcagaagattgaggatgatgcagatgttgagtgg
aagtttgcccgctctaagctgtacctcagttacttcagagaggggctcaccatgcccgtg
cccttcaacatcatcccctcacccaaagccgccttttacatcttacgaggtatcttcaga
cgaatgtgctgctgctgcacctgtaattctgagcaaaaatatccacctataacctctatg
tgcaatgataagggatctgaggccagccagttaccttaccggcagcaagtgatccgggcc
ctggtgcagcgctacatcgagtcagctcgcagggagttcgaggagaccaagaggaaagac
attggtaatcgcatcactttgctgagcaaagtggtctgcaggatgcacagtgatttgaag
ttggtccagcagcagctgctggtggatgatgaacagtctgcaaatgatgcattgacaaag
gatggctcctccatactggggaaatacatcatcggtgccaagaacaatttcagaggtttc
aacagcagagaagagggcaaaaacccatctcttgaagtgacagtgcaccacgaagaggtt
gaggtggataaagaaaaggttgacgcggacacaaaacaggagtcagacccacagcagaat
caggcgggcaaatgtggagcggagggatcaaggcaggtaacagactgtgacgtggtgaag
atggaggaaggcagagctaaagtagacccagggaatgagagggaaattgagaaaaaacag
caggtggaagcagaaaaaaatgaaaacactgagattaaagcgagagaggagggagcagcc
gggacaagtttggatactgttgaagaaagggtcgcacaggatgaggcggggaaaataagg
gaaggagagagacttgcagggggcaaggtgggtgaaaaccccaaagaggccactactgaa
cgagctgagagcaccagcgacgacaagacagacacacaaaaattagtgaccaagttcaaa
gacatagagctgcaagaaaaaaaagtggatgcgagacgggtgaagagcagaaagttggag
cacaatgaaacagagactaaacccggagccaagaaaaacatcccctcgccgacgggcagc
agcagctcccaggacactgggttcggttcacaagaaggggaggggtcaatcgacgggttg
ctagtgagaccgtaa
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integrated database retrieval system
