Scophthalmus maximus (turbot): 118300955
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Entry
118300955 CDS
T09850
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118300955 (arhgef28a)
Membrane trafficking [BR:
smau04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118300955 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
SOS1_NGEF_PH
Ank_2
Prok-RING_1
PH_13
C1_2
PHD
Motif
Other DBs
NCBI-GeneID:
118300955
NCBI-ProteinID:
XP_035481787
LinkDB
All DBs
Position
2:3951176..3993601
Genome browser
AA seq
1782 aa
AA seq
DB search
MLQHPVDGEKMEVNRREVPLYGQVEANVKLQAIAPEDTEFYVVLQGSRLTHTTAAKRGDD
GMNLCFTVPGHDLAEVVSVTSYIYAENRVKPCEGEASLEYLRDVAQEAAEYLSAHRDHLG
TQSYLEVLERFPVWVQAADEEYSAGVLDQDEGDEDDLQVRESRSEDAGLLQLDEKITQAM
ANMDYPPQWKNTDSQQREVAEIQPKETLLHLAVRLGLVHLSRFLIHQPRGQRALTLPNQE
GDTPLQLAQKDGQHALFMVLAASPGPVADPAPGVFSVWSDSSRMLRFCPGTNSLTLTVRQ
APGSCPQEDIVVLRDRLEDRSILRLINMLRADTEIDKRSKDEVLSNVEGISKEIRVEEHV
LVDNVFEEQLVLSLDDDDDVKEYPSSLSVCGHAVKTGRAESQFTQHDTDPLLSTINSSDK
KTTQRSQADDVDLKCNIGGVTRDSTGTDSGLWDSSESQDLPLATDTPPAYSENLCPYSVC
HSPPLSPADQAPARLSCPTSSEQTNERDSPPMDACDLSPSLVALEVDSEEESAATNVAKS
EDQKDAVCPASDLSCTRTKSASAACEPATKELEDQGIRLRSYSYSSPKIRLRPARFARDN
PASDTSPDAVLHSVSHSRSLLQALSLSKSLSLLHPGKQRACSISEQSHEKREIRFRNRAQ
SADDEGSMELAESLQHLTLSEFLKEIEEEELDKYSIPTKVESEKYKVIRTFSFLKSRMSS
TRNKTKGKGKEREAKDRQLNGHRFATGPCLGPTMCIVCDKPASGKDLLHCSSCTAIIHKG
CKESLPPCLKKLQEKYSVTMVKNRTASLPQNFTVRDSPPQCVIPVSTSLPVMAAKEKNTG
TQPCSLSGSFPTSDSRHSESSETESDAVKVPSHSEELLPTPTSSTSTDSSFGEDCVDTCV
QGDISADAADYEAESWSLTVEHKFCKRHDKRAVKRQDVIYELMQTELHHLQTLHIMAEVF
RRGMREEVQLDTEAVKRVFPCLDQLLVFHHGFFAAMKELRHSSAQPQGHRNYHIQRIGHV
LLQQFADENGEKMKQVYGEFCSRHNEAVSFFKELQQHNKRFQNFIKQQGYNSLVRRREIP
ECILLVTQRITKYPVLLERILHYTQEDTEECADLSKALSQIRDVIAAVDLRVSEYDRHQR
LQEVWNRMENRSSAKLKNGHTFRKQDIMWPGQTLKHQGLLLWKTATGRLKDVLALLLTDA
LIFLQEKDQKYTFAAVDQKPPVIALQKLIVREVANEERGMFLISASSAGPEMYEVHTSSK
EERNTWMRLIREAVESCPEEEEGCTSESEEEKRAAEARVLKIHKLQESLMSQDQQICSSL
EEKLQIYTELSALRGRTDASAVEARLLVQPHSEEAPQAAELLAAALQEAENLKATLSTKA
RSPSSHSPDSDTHSVFAVSPAPLVELPTDSSELSPENPDASEGSWSEAIVLQSRESDDID
FKVAQSVQSLTQLLYSLQAAVTIQDSCYEVQRLLLRETGRPSPRAQRPHLPSTRGNTLQE
QEKQRNLEKRKEEVVAAQRLQDRLRQEKERWERECQARESQQGEQESRLEERERQCHLEV
ERLRHEREELDSQLGDYQQSLERLREGQRSVEREREHLENQQKLLQTWKHSRQRSLPTVI
PHMVIPLDGQQDSSPSPSRDLGGNGSMFVNEAAFSSTLVNNRHVHHKKNDPSTHNCLNTL
LARSNSRQPPVAKTPHNPHSDSQGWVMGTGYLYSPAGRLELQHTPTDHNSYIGETWLPTA
SGADLYPELPHPSDPQLDLSELVSLETDSGGEEGREETIVYL
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttacagcatccggtggatggggagaaaatggaggttaacagaagagaggtgcctcta
tatggacaagtggaggccaatgtaaagttgcaagccatcgctcctgaagacacagagttt
tatgttgttctacaaggttcaagactaacacatacgacagcagcaaaacgaggagatgat
gggatgaacctttgcttcacagttcccggccatgaccttgccgaagttgtctctgtcaca
tcctacatttacgcagagaaccgagtcaagccatgtgagggcgaggcgtctcttgaatac
ctcagggacgttgcccaggaagcagcagagtatctgagtgcacacagggaccatcttggc
acccagagctaccttgaggtcctggagaggtttcccgtgtgggtgcaggcggctgacgag
gagtactctgctggagtgttggaccaggatgagggtgatgaagatgatttgcaagtcaga
gaaagtaggagtgaagatgctggtctcctgcagctggatgagaagatcacacaggctatg
gccaacatggattaccctccgcagtggaaaaacactgacagtcagcaaagggaagttgct
gagattcagcccaaagaaaccctgcttcaccttgcggtgcgtttgggtttggtccatctc
tcccgcttcttaatccaccaaccgagaggtcaaagagcattgaccttacccaatcaggag
ggagacacccccctccagctggctcagaaggatggacaacatgctttgttcatggtgttg
gcagcttctccaggtcctgtggccgatcctgccccaggtgtgttcagcgtgtggtccgac
agctcccgcatgctgaggttttgtcctgggacaaactctctgaccctgactgttcgacag
gctcccggcagctgccctcaagaggacatcgtggtcctccgagacagactggaagaccgc
agcatcctaagactgatcaatatgctcagagctgatactgagatagacaagagaagcaaa
gatgaagtcctttctaatgttgaaggcattagcaaggagatccgagtggaggagcatgtg
ctggtggacaacgtttttgaagagcagcttgttctgtctttggatgacgacgatgatgta
aaagagtacccatcctcattatctgtctgtgggcatgctgtgaagacgggtagagccgag
agccagttcacccagcatgatacagaccctctgctctccacaatcaacagcagcgataag
aaaaccactcagcggtcgcaggcggatgatgttgacctcaagtgcaatatcggcggtgtg
acaagggacagcaccgggacggacagcggcttatgggattcgtcggagtcacaagacctc
ccgctcgccactgacactcctccagcctattcagaaaacctctgcccctactctgtatgc
cactctccgcctctctcacccgctgaccaggcccctgccaggctgagctgtcccacctcc
tctgagcagaccaatgagagagacagtccacccatggatgcctgcgacctcagtcccagt
ttagtggctctggaggtggacagtgaggaggagagcgccgcgacaaatgttgcgaagagt
gaagaccaaaaggacgccgtttgtcccgcgtctgacctttcttgcactcgtaccaagtct
gcctccgcggcgtgtgagcccgccacaaaagaactggaggaccaggggattcgactgcgt
tcctattcctactcctccccaaaaatcaggttgcggcctgctcgttttgcccgggacaat
cccgcttcagataccagccctgatgccgtgctccacagtgtcagccacagccgatctctc
cttcaggccctctctctgtctaaatctctgtctctgctccaccctggtaagcaaagagcc
tgcagtatttcagagcagtcacatgagaaaagggagattaggttccgtaatcgtgcccag
tctgctgatgatgagggaagcatggagctggcagagtcgctccaacacctcacgctgtct
gagttcctcaaagagattgaagaggaggagctggataagtacagtatcccaaccaaagtt
gagtcagagaagtacaaagtcatccgcaccttcagttttctcaagagcaggatgtctagt
acacgcaacaaaaccaaggggaaggggaaggagagagaagccaaggataggcagctgaat
ggacatcgcttcgcaacagggccctgtttgggccccaccatgtgtatcgtatgtgacaaa
ccagcatctggaaaggacctgctgcattgctccagttgcactgccatcatccacaagggc
tgtaaggagtctttgcccccgtgtttgaagaaacttcaggaaaaatattccgtgacaatg
gtgaagaacaggacggcatccctcccacagaatttcacagtgagagacagccctcctcag
tgtgtgatccccgtctctacctctctacctgtcatggccgcgaaggagaagaacaccggg
acccagccatgctctctgtctggaagtttccccaccagtgacagtcggcacagtgagagt
tcagagacagaatctgatgctgtgaaggttcccagccactcagaagaactgctgccgacg
ccaacgtcctccacctccacggactcatcctttggagaggactgtgtcgacacgtgtgtc
caaggtgacatctcggcggatgctgcggattacgaggcggagtcgtggagtctgacagta
gagcacaagttctgcaagaggcacgacaagcgagccgtcaagaggcaggatgttatctat
gagctgatgcagactgagcttcaccacctgcagacgttgcacatcatggcggaggttttc
cggcgaggtatgagggaggaagtgcagctagacacagaagcggtgaagcgggtcttcccc
tgtctggaccagctgctcgtcttccatcacggcttcttcgctgccatgaaggagctgcga
cacagctcggcccagccccagggacacaggaactaccacatccagcggataggtcacgtc
ctgctccaacagtttgcagatgaaaatggcgagaagatgaagcaggtatatggagaattc
tgcagtcgtcacaacgaagcagtcagctttttcaaagagctccagcagcataacaagaga
tttcagaacttcattaagcaacaaggttataattctttggtgcgacgaagggagatccca
gagtgcatcttgctggtaacccaaaggataacaaagtacccagtgctgctggagaggatc
ctacattacactcaagaagacacagaggaatgtgccgacctttcaaaagccctgtctcag
atccgggatgtgatagccgccgtggacttgagggtgagcgaatacgaccgccatcagaga
ctacaggaagtgtggaaccgcatggagaaccgcagctcggccaagctgaagaacggacac
accttccggaagcaggacatcatgtggccggggcaaacgctcaaacaccagggcctgctc
ctgtggaagactgccactggtcgactcaaagatgtcctggcgctccttctcactgacgca
ctcatcttcctgcaggaaaaggaccagaagtacacatttgccgctgtggaccagaaacct
ccagtcattgcactgcagaagttaatagttcgagaagttgcaaatgaggagagagggatg
tttttgatcagcgcatcatctgctgggccagaaatgtacgaggtccacacgtcatccaaa
gaggagcgaaacacctggatgaggctcatcagagaggctgtagagagctgtccagaggaa
gaagaaggatgcacaagtgaatctgaagaggagaagcgagctgccgaggcccgagtccta
aagatccataagttacaagagagtctgatgagccaggaccagcagatctgctccagcctg
gaggagaagctgcagatttacaccgagctctctgctctgagggggaggacggacgcctcg
gcagtcgaagcgcggctgcttgtccagccgcactcagaggaggcgccccaggccgccgag
ctgctggctgcagctctgcaagaggcggaaaacctcaaagccacgttgtcaaccaaggcc
cgttctccatccagccacagcccggactctgacacacactctgtgttcgctgtcagccct
gctccacttgttgagctccccactgattcttctgagctctcacctgaaaaccctgatgcc
agtgaggggagttggtctgaggccattgttcttcaatcccgagagtcagatgacattgac
ttcaaggtggctcaaagtgtccaaagcctgacccagttactttacagtctgcaggctgcg
gtgaccatccaagacagctgctacgaggtccagaggctcctcctccgagagaccgggcgc
ccgtctccgcgcgctcagcgaccgcaccttccaagcacccggggcaacaccttacaagag
caggagaagcagcgcaacctggagaagcggaaggaggaggtggtggcggcacagcggctc
caggacagactgcgccaggagaaggagcgctgggagagggagtgccaggccagggagagt
cagcagggggagcaggagagcaggctggaggagcgggagaggcagtgccacctggaggtg
gagaggctgcggcatgagagggaagagctggactcgcagctgggggattaccagcagagc
ttggagcggctcagggagggccagaggagtgttgagagggagcgtgagcacctggagaac
cagcagaagctactccagacctggaagcacagccggcagaggagcctgcccactgtgatt
cctcacatggtcatacctctagatggtcagcaggactcgtcgccaagtccatcgagagac
ctcggtggtaacggctccatgtttgtgaatgaggctgcgttcagcagcaccctcgtcaac
aaccgccacgtccaccacaaaaaaaatgaccccagcacgcataactgtctcaacaccctg
ctggccagatccaacagcagacagccccccgtagctaaaaccccccataatccacactca
gactcccagggatgggtgatggggacagggtacctctacagccctgcaggaaggctggaa
ctgcagcacacgcccactgatcataacagctacatcggggagacctggttgccaacagca
agtggagctgatctgtatccggagctcccgcatcccagtgaccctcagctggacctcagt
gaactggtttccttggagactgacagtggtggtgaggaaggcagggaggaaaccatcgtg
tacctctga
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integrated database retrieval system
