Scophthalmus maximus (turbot): 118301037
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Entry
118301037 CDS
T09850
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118301037 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118301037 (exosc8)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118301037 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
118301037
NCBI-ProteinID:
XP_035481982
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All DBs
Position
2:22650896..22654425
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AA seq
300 aa
AA seq
DB search
MLYFRSPGCRSAESQTHVVNQNIMAAGFKTVEPLEYHRSFLKENCRPDGRELSEFRTTTL
NIGSISTANGSALVKFGNTTVMCGIKAELANPTVETPGKGYIVPNVDLPPLCSSRFRPGP
PGEQAQAASQFIADVIESSGVIQTEDLCIDRGKLCWVLYCDMMCLDYDGNLLDACIVALL
AALKNTRLPEVTFNTETSAPEVNSEKRQGLCIRKHPVATSFCIFDDSILIVDPTAEEESL
ATAQLTVVTDEEDRLCSVHKPGGTSMSGQKLQECISRATARQREIQKLIDKVAHSVKMEQ
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacttccgctctccgggctgccgtagtgcggaaagccaaacccacgtggttaat
caaaacatcatggcggctggtttcaaaaccgtcgagcctctcgagtaccaccggagcttc
ctgaaagaaaactgtcgacctgacggacgggagctgtcagagttcaggaccacaacactg
aacatcggctccatatccacggccaacggctcagcgctggtgaagtttggaaacactacg
gtcatgtgtgggatcaaagcggagttggcaaaccccacagtggaaacacccggtaaaggt
tacattgtgcccaacgtggacctgccgcccctgtgttcgtctcggttccgtcctggcccg
ccaggagagcaggcccaggctgccagccagttcatcgccgatgtaatcgaaagctctgga
gtgatacaaacggaggacttgtgcattgacaggggaaagctctgctgggtgctctactgt
gacatgatgtgtctcgactacgatgggaacctgctggacgcttgtatcgttgccctgctg
gctgccctgaagaacacacgactcccagaggtcaccttcaacacagagacgagtgcacca
gaggtgaactcggaaaagagacaagggctgtgtattcgcaaacatccggtggccacctcg
ttttgtatcttcgacgactccatactgatcgtagaccccacggccgaggaggagagtctg
gcgaccgctcagctcaccgtggtgaccgatgaggaagatcgactctgttccgtccacaaa
ccaggtgggacgtcgatgtctggacagaagctgcaggagtgcatcagccgagcgacggcg
cggcagagagagatccagaaactcatcgacaaagtcgcacacagtgtgaagatggaacaa
taa
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